RNA–Protein interactions for RNA: ENST00000467438.1

LINC01140-202, Transcript of long intergenic non-protein coding RNA 1140, humanhuman

TSL 2 BASIC

Gene LINC01140, Length 2,375 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01140-202ENST00000467438 FCGBPQ9Y6R7 5405 aaPredicted RBP7.16□□□□□ -1.26
LINC01140-202ENST00000467438 KRTAP4-3Q9BYR4 195 aa7.14□□□□□ -1.27
LINC01140-202ENST00000467438 LOC100996750A0A140TA64 210 aa7.12□□□□□ -1.27
LINC01140-202ENST00000467438 MUC12Q9UKN1 5478 aa7.12□□□□□ -1.27
LINC01140-202ENST00000467438 KRTAP19-6Q3LI70 58 aa7.08□□□□□ -1.28
LINC01140-202ENST00000467438 LCE2DQ5TA82 110 aaPredicted RBP7.05□□□□□ -1.28
LINC01140-202ENST00000467438 KRTAP19-4Q3LI73 84 aa7.01□□□□□ -1.29
LINC01140-202ENST00000467438 MT1GP13640 62 aa6.98□□□□□ -1.29
LINC01140-202ENST00000467438 CRCT1Q9UGL9 99 aa6.95□□□□□ -1.3
LINC01140-202ENST00000467438 DSTQ03001 7570 aaKnown RBP6.89□□□□□ -1.31
LINC01140-202ENST00000467438 MT1MQ8N339 61 aa6.86□□□□□ -1.31
LINC01140-202ENST00000467438 KRTAP19-3Q7Z4W3 81 aa6.82□□□□□ -1.32
LINC01140-202ENST00000467438 SPRR2FQ96RM1 72 aa6.61□□□□□ -1.35
LINC01140-202ENST00000467438 MACF1Q9UPN3 7388 aaKnown RBP6.59□□□□□ -1.35
LINC01140-202ENST00000467438 LCE5AQ5TCM9 118 aa6.59□□□□□ -1.35
LINC01140-202ENST00000467438 KRTAP12-4P60329 112 aa6.52□□□□□ -1.37
LINC01140-202ENST00000467438 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.49□□□□□ -1.37
LINC01140-202ENST00000467438 LCE3BQ5TA77 95 aa6.48□□□□□ -1.37
LINC01140-202ENST00000467438 KRTAP4-9Q9BYQ8 210 aa6.45□□□□□ -1.38
LINC01140-202ENST00000467438 SYNE2Q8WXH0 6885 aaKnown RBP6.45□□□□□ -1.38
LINC01140-202ENST00000467438 KRTAP9-7A8MTY7 169 aa6.44□□□□□ -1.38
LINC01140-202ENST00000467438 SYNE1Q8NF91 8797 aaKnown RBP6.43□□□□□ -1.38
LINC01140-202ENST00000467438 MDN1Q9NU22 5596 aa6.41□□□□□ -1.38
LINC01140-202ENST00000467438 KRTAP6-1Q3LI64 71 aa6.31□□□□□ -1.4
LINC01140-202ENST00000467438 LCE1AQ5T7P2 110 aa6.11□□□□□ -1.43
LINC01140-202ENST00000467438 MT1AP04731 61 aa6.11□□□□□ -1.43
LINC01140-202ENST00000467438 KRTAP5-5Q701N2 237 aaPredicted RBP6.03□□□□□ -1.44
LINC01140-202ENST00000467438 LCE3DQ9BYE3 92 aa6.02□□□□□ -1.45
LINC01140-202ENST00000467438 KRTAP6-3Q3LI67 103 aa5.98□□□□□ -1.45
LINC01140-202ENST00000467438 KRTAP5-9P26371 169 aa5.97□□□□□ -1.45
LINC01140-202ENST00000467438 SPRR2EP22531 72 aa5.95□□□□□ -1.46
LINC01140-202ENST00000467438 SPRR2BP35325 72 aa5.95□□□□□ -1.46
LINC01140-202ENST00000467438 SPRR2AP35326 72 aa5.95□□□□□ -1.46
LINC01140-202ENST00000467438 LCE3EQ5T5B0 92 aa5.93□□□□□ -1.46
LINC01140-202ENST00000467438 KRTAP2-2Q9BYT5 123 aa5.92□□□□□ -1.46
LINC01140-202ENST00000467438 OBSCNQ5VST9 7968 aa5.9□□□□□ -1.46
LINC01140-202ENST00000467438 NEBP20929 6669 aa5.84□□□□□ -1.47
LINC01140-202ENST00000467438 PRM1P04553 51 aa5.8□□□□□ -1.48
LINC01140-202ENST00000467438 KRTAP9-4Q9BYQ2 154 aa5.77□□□□□ -1.49
LINC01140-202ENST00000467438 SPRR2DP22532 72 aa5.67□□□□□ -1.5
LINC01140-202ENST00000467438 KRTAP6-2Q3LI66 62 aa5.64□□□□□ -1.51
LINC01140-202ENST00000467438 KRTAP20-1Q3LI63 56 aa5.6□□□□□ -1.51
LINC01140-202ENST00000467438 MT3P25713 68 aa5.47□□□□□ -1.53
LINC01140-202ENST00000467438 LCE1EQ5T753 118 aa5.33□□□□□ -1.56
LINC01140-202ENST00000467438 KRTAP5-4Q6L8H1 288 aa5.2□□□□□ -1.58
LINC01140-202ENST00000467438 KRTAP4-6Q9BYQ5 205 aa5.19□□□□□ -1.58
LINC01140-202ENST00000467438 LCE1DQ5T752 114 aa5.13□□□□□ -1.59
LINC01140-202ENST00000467438 MT4P47944 62 aa5.12□□□□□ -1.59
LINC01140-202ENST00000467438 KRTAP20-2Q3LI61 65 aa4.95□□□□□ -1.62
LINC01140-202ENST00000467438 HMCN1Q96RW7 5635 aa4.88□□□□□ -1.63
LINC01140-202ENST00000467438 KRTAP5-2Q701N4 177 aa4.88□□□□□ -1.63
LINC01140-202ENST00000467438 LCE1FQ5T754 118 aa4.87□□□□□ -1.63
LINC01140-202ENST00000467438 GPR98Q8WXG9 6306 aa4.83□□□□□ -1.64
LINC01140-202ENST00000467438 MUC5ACP98088 5654 aa4.77□□□□□ -1.65
LINC01140-202ENST00000467438 LCE4AQ5TA78 99 aa4.77□□□□□ -1.65
LINC01140-202ENST00000467438 KRTAP5-3Q6L8H2 238 aa4.69□□□□□ -1.66
LINC01140-202ENST00000467438 LCE1BQ5T7P3 118 aa4.55□□□□□ -1.68
LINC01140-202ENST00000467438 AHNAK2Q8IVF2 5795 aa4.52□□□□□ -1.69
LINC01140-202ENST00000467438 KRTAP4-11Q9BYQ6 195 aa4.43□□□□□ -1.7
LINC01140-202ENST00000467438 KRTAP5-10Q6L8G5 202 aa4.42□□□□□ -1.7
LINC01140-202ENST00000467438 KRTAP5-1Q6L8H4 278 aa4.31□□□□□ -1.72
LINC01140-202ENST00000467438 KRTAP4-2Q9BYR5 136 aa4.28□□□□□ -1.72
LINC01140-202ENST00000467438 KRTAP5-7Q6L8G8 165 aa4.23□□□□□ -1.73
LINC01140-202ENST00000467438 LCE1CQ5T751 118 aa4.18□□□□□ -1.74
LINC01140-202ENST00000467438 KRTAP21-2Q3LI59 83 aa4.04□□□□□ -1.76
LINC01140-202ENST00000467438 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.91□□□□□ -1.78
LINC01140-202ENST00000467438 KRTAP5-8O75690 187 aa3.88□□□□□ -1.79
LINC01140-202ENST00000467438 KRTAP4-4Q9BYR3 166 aa3.85□□□□□ -1.79
LINC01140-202ENST00000467438 MUC5BQ9HC84 5762 aaPredicted RBP3.77□□□□□ -1.81
LINC01140-202ENST00000467438 MUC19Q7Z5P9 8384 aa3.73□□□□□ -1.81
LINC01140-202ENST00000467438 AHNAKQ09666 5890 aaKnown RBP3.72□□□□□ -1.81
LINC01140-202ENST00000467438 KRTAP9-9Q9BYP9 154 aa3.65□□□□□ -1.83
LINC01140-202ENST00000467438 KRTAP4-12Q9BQ66 201 aa3.59□□□□□ -1.84
LINC01140-202ENST00000467438 KRTAP21-1Q3LI58 79 aa3.58□□□□□ -1.84
LINC01140-202ENST00000467438 KRTAP5-11Q6L8G4 156 aa3.56□□□□□ -1.84
LINC01140-202ENST00000467438 PHGR1C9JFL3 82 aa3.12□□□□□ -1.91
LINC01140-202ENST00000467438 MUC16Q8WXI7 14507 aa2.11□□□□□ -2.07
Retrieved 77 of 20,778 RNA–protein pairs in 99.6 ms