RNA–Protein interactions for RNA: ENST00000467318.5

DDX56-208, Transcript of DEAD-box helicase 56, humanhuman

TSL 5

Gene DDX56, Length 1,665 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-208ENST00000467318 MUC12Q9UKN1 5478 aa5.53□□□□□ -1.52
DDX56-208ENST00000467318 KRTAP19-7Q3SYF9 63 aa5.5□□□□□ -1.53
DDX56-208ENST00000467318 KRTAP19-5Q3LI72 72 aa5.47□□□□□ -1.53
DDX56-208ENST00000467318 MT1EP04732 61 aa5.42□□□□□ -1.54
DDX56-208ENST00000467318 MDN1Q9NU22 5596 aa5.41□□□□□ -1.54
DDX56-208ENST00000467318 KRTAP12-3P60328 96 aa5.4□□□□□ -1.55
DDX56-208ENST00000467318 SPRR2EP22531 72 aa5.39□□□□□ -1.55
DDX56-208ENST00000467318 SPRR2BP35325 72 aa5.39□□□□□ -1.55
DDX56-208ENST00000467318 SPRR2AP35326 72 aa5.39□□□□□ -1.55
DDX56-208ENST00000467318 LCE1AQ5T7P2 110 aa5.39□□□□□ -1.55
DDX56-208ENST00000467318 NEBP20929 6669 aa5.38□□□□□ -1.55
DDX56-208ENST00000467318 KRTAP19-3Q7Z4W3 81 aa5.31□□□□□ -1.56
DDX56-208ENST00000467318 KRTAP19-4Q3LI73 84 aa5.26□□□□□ -1.57
DDX56-208ENST00000467318 LCE5AQ5TCM9 118 aa5.26□□□□□ -1.57
DDX56-208ENST00000467318 MT1LQ93083 61 aa5.26□□□□□ -1.57
DDX56-208ENST00000467318 MT1GP13640 62 aa5.24□□□□□ -1.57
DDX56-208ENST00000467318 SPRR2DP22532 72 aa5.21□□□□□ -1.58
DDX56-208ENST00000467318 MT1MQ8N339 61 aa5.12□□□□□ -1.59
DDX56-208ENST00000467318 KRTAP2-3P0C7H8 128 aa5.09□□□□□ -1.59
DDX56-208ENST00000467318 KRTAP20-1Q3LI63 56 aa5.09□□□□□ -1.59
DDX56-208ENST00000467318 KRTAP2-4Q9BYR9 128 aa5.09□□□□□ -1.59
DDX56-208ENST00000467318 LCE3CQ5T5A8 94 aa5.08□□□□□ -1.6
DDX56-208ENST00000467318 KRTAP4-7Q9BYR0 210 aa5.07□□□□□ -1.6
DDX56-208ENST00000467318 KRTAP4-3Q9BYR4 195 aa5.05□□□□□ -1.6
DDX56-208ENST00000467318 LCE3BQ5TA77 95 aa5.04□□□□□ -1.6
DDX56-208ENST00000467318 DSTQ03001 7570 aaKnown RBP5.01□□□□□ -1.61
DDX56-208ENST00000467318 INE1O15225 51 aa4.97□□□□□ -1.61
DDX56-208ENST00000467318 KRTAP2-2Q9BYT5 123 aa4.96□□□□□ -1.61
DDX56-208ENST00000467318 KRTAP2-1Q9BYU5 128 aa4.96□□□□□ -1.61
DDX56-208ENST00000467318 LOC100996750A0A140TA64 210 aa4.77□□□□□ -1.65
DDX56-208ENST00000467318 KRTAP9-6A8MVA2 160 aa4.74□□□□□ -1.65
DDX56-208ENST00000467318 KRTAP5-5Q701N2 237 aaPredicted RBP4.67□□□□□ -1.66
DDX56-208ENST00000467318 KRTAP9-4Q9BYQ2 154 aa4.66□□□□□ -1.66
DDX56-208ENST00000467318 LCE4AQ5TA78 99 aa4.65□□□□□ -1.66
DDX56-208ENST00000467318 KRTAP5-4Q6L8H1 288 aa4.64□□□□□ -1.67
DDX56-208ENST00000467318 KRTAP4-9Q9BYQ8 210 aa4.64□□□□□ -1.67
DDX56-208ENST00000467318 MT4P47944 62 aa4.56□□□□□ -1.68
DDX56-208ENST00000467318 LCE1DQ5T752 114 aa4.54□□□□□ -1.68
DDX56-208ENST00000467318 KRTAP4-6Q9BYQ5 205 aa4.49□□□□□ -1.69
DDX56-208ENST00000467318 MT1AP04731 61 aa4.48□□□□□ -1.69
DDX56-208ENST00000467318 KRTAP12-4P60329 112 aa4.47□□□□□ -1.69
DDX56-208ENST00000467318 KRTAP9-9Q9BYP9 154 aa4.47□□□□□ -1.69
DDX56-208ENST00000467318 KRTAP6-1Q3LI64 71 aa4.42□□□□□ -1.7
DDX56-208ENST00000467318 HMCN1Q96RW7 5635 aa4.41□□□□□ -1.7
DDX56-208ENST00000467318 SYNE1Q8NF91 8797 aaKnown RBP4.41□□□□□ -1.7
DDX56-208ENST00000467318 KRTAP20-2Q3LI61 65 aa4.34□□□□□ -1.71
DDX56-208ENST00000467318 MT3P25713 68 aa4.26□□□□□ -1.73
DDX56-208ENST00000467318 KRTAP5-3Q6L8H2 238 aa4.2□□□□□ -1.74
DDX56-208ENST00000467318 KRTAP6-2Q3LI66 62 aa4.14□□□□□ -1.75
DDX56-208ENST00000467318 KRTAP5-2Q701N4 177 aa4.14□□□□□ -1.75
DDX56-208ENST00000467318 LCE1FQ5T754 118 aa4.06□□□□□ -1.76
DDX56-208ENST00000467318 AHNAK2Q8IVF2 5795 aa4.06□□□□□ -1.76
DDX56-208ENST00000467318 KRTAP5-10Q6L8G5 202 aa3.99□□□□□ -1.77
DDX56-208ENST00000467318 GPR98Q8WXG9 6306 aa3.98□□□□□ -1.77
DDX56-208ENST00000467318 LCE3DQ9BYE3 92 aa3.91□□□□□ -1.78
DDX56-208ENST00000467318 KRTAP4-12Q9BQ66 201 aa3.88□□□□□ -1.79
DDX56-208ENST00000467318 LCE3EQ5T5B0 92 aa3.87□□□□□ -1.79
DDX56-208ENST00000467318 KRTAP4-11Q9BYQ6 195 aa3.87□□□□□ -1.79
DDX56-208ENST00000467318 OBSCNQ5VST9 7968 aa3.86□□□□□ -1.79
DDX56-208ENST00000467318 KRTAP5-7Q6L8G8 165 aa3.75□□□□□ -1.81
DDX56-208ENST00000467318 KRTAP5-8O75690 187 aa3.72□□□□□ -1.81
DDX56-208ENST00000467318 LCE1EQ5T753 118 aa3.68□□□□□ -1.82
DDX56-208ENST00000467318 KRTAP5-1Q6L8H4 278 aa3.63□□□□□ -1.83
DDX56-208ENST00000467318 PRM1P04553 51 aa3.56□□□□□ -1.84
DDX56-208ENST00000467318 MUC5ACP98088 5654 aa3.45□□□□□ -1.86
DDX56-208ENST00000467318 LCE1CQ5T751 118 aa3.4□□□□□ -1.86
DDX56-208ENST00000467318 LCE1BQ5T7P3 118 aa3.4□□□□□ -1.86
DDX56-208ENST00000467318 KRTAP4-2Q9BYR5 136 aa3.39□□□□□ -1.87
DDX56-208ENST00000467318 MUC5BQ9HC84 5762 aaPredicted RBP3.28□□□□□ -1.88
DDX56-208ENST00000467318 AHNAKQ09666 5890 aaKnown RBP3.16□□□□□ -1.9
DDX56-208ENST00000467318 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.15□□□□□ -1.9
DDX56-208ENST00000467318 KRTAP5-11Q6L8G4 156 aa3.03□□□□□ -1.92
DDX56-208ENST00000467318 KRTAP21-2Q3LI59 83 aa2.92□□□□□ -1.94
DDX56-208ENST00000467318 KRTAP4-4Q9BYR3 166 aa2.66□□□□□ -1.98
DDX56-208ENST00000467318 PHGR1C9JFL3 82 aa2.6□□□□□ -1.99
DDX56-208ENST00000467318 MUC19Q7Z5P9 8384 aa2.34□□□□□ -2.03
DDX56-208ENST00000467318 KRTAP21-1Q3LI58 79 aa2.28□□□□□ -2.04
DDX56-208ENST00000467318 MUC16Q8WXI7 14507 aa1.62□□□□□ -2.15
Retrieved 78 of 20,778 RNA–protein pairs in 105.6 ms