RNA–Protein interactions for RNA: ENST00000467045.5

COL21A1-206, Transcript of collagen type XXI alpha 1 chain, humanhuman

TSL 2

Gene COL21A1, Length 2,291 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1-206ENST00000467045 MACF1Q9UPN3 7388 aaKnown RBP4.73□□□□□ -1.65
COL21A1-206ENST00000467045 KRTAP4-11Q9BYQ6 195 aa4.69□□□□□ -1.66
COL21A1-206ENST00000467045 KRTAP9-7A8MTY7 169 aa4.67□□□□□ -1.66
COL21A1-206ENST00000467045 KRTAP10-7P60409 375 aaPredicted RBP4.66□□□□□ -1.66
COL21A1-206ENST00000467045 LCE3AQ5TA76 89 aa4.64□□□□□ -1.67
COL21A1-206ENST00000467045 SYNE2Q8WXH0 6885 aaKnown RBP4.64□□□□□ -1.67
COL21A1-206ENST00000467045 KRTAP10-12P60413 245 aa4.61□□□□□ -1.67
COL21A1-206ENST00000467045 KRTAP6-3Q3LI67 103 aa4.6□□□□□ -1.67
COL21A1-206ENST00000467045 KRTAP8-1Q8IUC2 63 aa4.56□□□□□ -1.68
COL21A1-206ENST00000467045 KMT2DO14686 5537 aa4.56□□□□□ -1.68
COL21A1-206ENST00000467045 KRTAP5-9P26371 169 aa4.5□□□□□ -1.69
COL21A1-206ENST00000467045 SPRR2FQ96RM1 72 aa4.47□□□□□ -1.69
COL21A1-206ENST00000467045 KRTAP12-3P60328 96 aa4.43□□□□□ -1.7
COL21A1-206ENST00000467045 MUC12Q9UKN1 5478 aa4.36□□□□□ -1.71
COL21A1-206ENST00000467045 KRTAP19-7Q3SYF9 63 aa4.34□□□□□ -1.72
COL21A1-206ENST00000467045 SPRR2EP22531 72 aa4.33□□□□□ -1.72
COL21A1-206ENST00000467045 SPRR2BP35325 72 aa4.33□□□□□ -1.72
COL21A1-206ENST00000467045 SPRR2AP35326 72 aa4.33□□□□□ -1.72
COL21A1-206ENST00000467045 KRTAP19-5Q3LI72 72 aa4.33□□□□□ -1.72
COL21A1-206ENST00000467045 LCE1AQ5T7P2 110 aa4.31□□□□□ -1.72
COL21A1-206ENST00000467045 MDN1Q9NU22 5596 aa4.3□□□□□ -1.72
COL21A1-206ENST00000467045 NEBP20929 6669 aa4.29□□□□□ -1.72
COL21A1-206ENST00000467045 MT1EP04732 61 aa4.28□□□□□ -1.72
COL21A1-206ENST00000467045 INE1O15225 51 aa4.21□□□□□ -1.74
COL21A1-206ENST00000467045 LCE3CQ5T5A8 94 aa4.19□□□□□ -1.74
COL21A1-206ENST00000467045 SPRR2DP22532 72 aa4.18□□□□□ -1.74
COL21A1-206ENST00000467045 KRTAP19-3Q7Z4W3 81 aa4.18□□□□□ -1.74
COL21A1-206ENST00000467045 LCE5AQ5TCM9 118 aa4.17□□□□□ -1.74
COL21A1-206ENST00000467045 MT1LQ93083 61 aa4.15□□□□□ -1.75
COL21A1-206ENST00000467045 KRTAP20-1Q3LI63 56 aa4.12□□□□□ -1.75
COL21A1-206ENST00000467045 MT1GP13640 62 aa4.12□□□□□ -1.75
COL21A1-206ENST00000467045 KRTAP2-3P0C7H8 128 aa4.1□□□□□ -1.75
COL21A1-206ENST00000467045 KRTAP2-4Q9BYR9 128 aa4.1□□□□□ -1.75
COL21A1-206ENST00000467045 MT1MQ8N339 61 aa4.06□□□□□ -1.76
COL21A1-206ENST00000467045 KRTAP9-6A8MVA2 160 aa4.03□□□□□ -1.76
COL21A1-206ENST00000467045 KRTAP19-4Q3LI73 84 aa4□□□□□ -1.77
COL21A1-206ENST00000467045 KRTAP4-3Q9BYR4 195 aa3.99□□□□□ -1.77
COL21A1-206ENST00000467045 KRTAP2-2Q9BYT5 123 aa3.98□□□□□ -1.77
COL21A1-206ENST00000467045 KRTAP2-1Q9BYU5 128 aa3.98□□□□□ -1.77
COL21A1-206ENST00000467045 DSTQ03001 7570 aaKnown RBP3.93□□□□□ -1.78
COL21A1-206ENST00000467045 LCE4AQ5TA78 99 aa3.89□□□□□ -1.79
COL21A1-206ENST00000467045 KRTAP5-5Q701N2 237 aaPredicted RBP3.68□□□□□ -1.82
COL21A1-206ENST00000467045 KRTAP5-4Q6L8H1 288 aa3.68□□□□□ -1.82
COL21A1-206ENST00000467045 MT4P47944 62 aa3.65□□□□□ -1.83
COL21A1-206ENST00000467045 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.62□□□□□ -1.83
COL21A1-206ENST00000467045 MT1AP04731 61 aa3.52□□□□□ -1.85
COL21A1-206ENST00000467045 KRTAP12-4P60329 112 aa3.52□□□□□ -1.85
COL21A1-206ENST00000467045 HMCN1Q96RW7 5635 aa3.52□□□□□ -1.85
COL21A1-206ENST00000467045 KRTAP6-1Q3LI64 71 aa3.51□□□□□ -1.85
COL21A1-206ENST00000467045 SYNE1Q8NF91 8797 aaKnown RBP3.47□□□□□ -1.85
COL21A1-206ENST00000467045 KRTAP20-2Q3LI61 65 aa3.46□□□□□ -1.85
COL21A1-206ENST00000467045 KRTAP6-2Q3LI66 62 aa3.3□□□□□ -1.88
COL21A1-206ENST00000467045 KRTAP5-2Q701N4 177 aa3.27□□□□□ -1.89
COL21A1-206ENST00000467045 AHNAK2Q8IVF2 5795 aa3.26□□□□□ -1.89
COL21A1-206ENST00000467045 LCE3DQ9BYE3 92 aa3.23□□□□□ -1.89
COL21A1-206ENST00000467045 MT3P25713 68 aa3.21□□□□□ -1.9
COL21A1-206ENST00000467045 KRTAP5-10Q6L8G5 202 aa3.21□□□□□ -1.9
COL21A1-206ENST00000467045 GPR98Q8WXG9 6306 aa3.19□□□□□ -1.9
COL21A1-206ENST00000467045 LCE3EQ5T5B0 92 aa3.19□□□□□ -1.9
COL21A1-206ENST00000467045 KRTAP5-11Q6L8G4 156 aa3.07□□□□□ -1.92
COL21A1-206ENST00000467045 PRM1P04553 51 aa3.05□□□□□ -1.92
COL21A1-206ENST00000467045 KRTAP5-7Q6L8G8 165 aa3.03□□□□□ -1.92
COL21A1-206ENST00000467045 OBSCNQ5VST9 7968 aa3□□□□□ -1.93
COL21A1-206ENST00000467045 KRTAP5-8O75690 187 aa2.98□□□□□ -1.93
COL21A1-206ENST00000467045 KRTAP5-1Q6L8H4 278 aa2.94□□□□□ -1.94
COL21A1-206ENST00000467045 KRTAP4-4Q9BYR3 166 aa2.9□□□□□ -1.94
COL21A1-206ENST00000467045 LCE1EQ5T753 118 aa2.86□□□□□ -1.95
COL21A1-206ENST00000467045 MUC5ACP98088 5654 aa2.76□□□□□ -1.97
COL21A1-206ENST00000467045 LCE1BQ5T7P3 118 aa2.72□□□□□ -1.97
COL21A1-206ENST00000467045 LCE1CQ5T751 118 aa2.66□□□□□ -1.98
COL21A1-206ENST00000467045 MUC5BQ9HC84 5762 aaPredicted RBP2.62□□□□□ -1.99
COL21A1-206ENST00000467045 AHNAKQ09666 5890 aaKnown RBP2.56□□□□□ -2
COL21A1-206ENST00000467045 KRTAP21-2Q3LI59 83 aa2.3□□□□□ -2.04
COL21A1-206ENST00000467045 LCE1FQ5T754 118 aa2.23□□□□□ -2.05
COL21A1-206ENST00000467045 PHGR1C9JFL3 82 aa2.05□□□□□ -2.08
COL21A1-206ENST00000467045 KRTAP21-1Q3LI58 79 aa1.96□□□□□ -2.1
COL21A1-206ENST00000467045 MUC19Q7Z5P9 8384 aa1.83□□□□□ -2.12
COL21A1-206ENST00000467045 MUC16Q8WXI7 14507 aa1.31□□□□□ -2.2
Retrieved 78 of 20,778 RNA–protein pairs in 147.2 ms