RNA–Protein interactions for RNA: ENST00000466742.5

ABCF3-206, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 2

Gene ABCF3, Length 2,331 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-206ENST00000466742 KRTAP9-6A8MVA2 160 aa5.49□□□□□ -1.53
ABCF3-206ENST00000466742 MACF1Q9UPN3 7388 aaKnown RBP5.49□□□□□ -1.53
ABCF3-206ENST00000466742 KRTAP19-5Q3LI72 72 aa5.45□□□□□ -1.54
ABCF3-206ENST00000466742 SYNE2Q8WXH0 6885 aaKnown RBP5.44□□□□□ -1.54
ABCF3-206ENST00000466742 KRTAP9-7A8MTY7 169 aa5.43□□□□□ -1.54
ABCF3-206ENST00000466742 KRTAP19-7Q3SYF9 63 aa5.37□□□□□ -1.55
ABCF3-206ENST00000466742 MT1EP04732 61 aa5.26□□□□□ -1.57
ABCF3-206ENST00000466742 KRTAP19-4Q3LI73 84 aa5.19□□□□□ -1.58
ABCF3-206ENST00000466742 MT1LQ93083 61 aa5.17□□□□□ -1.58
ABCF3-206ENST00000466742 KRTAP6-3Q3LI67 103 aa5.15□□□□□ -1.58
ABCF3-206ENST00000466742 MUC12Q9UKN1 5478 aa5.14□□□□□ -1.59
ABCF3-206ENST00000466742 KRTAP12-4P60329 112 aa5.1□□□□□ -1.59
ABCF3-206ENST00000466742 KRTAP4-7Q9BYR0 210 aa5.1□□□□□ -1.59
ABCF3-206ENST00000466742 SPRR2FQ96RM1 72 aa5.09□□□□□ -1.59
ABCF3-206ENST00000466742 KRTAP19-3Q7Z4W3 81 aa5.05□□□□□ -1.6
ABCF3-206ENST00000466742 KRTAP5-9P26371 169 aa5.03□□□□□ -1.6
ABCF3-206ENST00000466742 MT1GP13640 62 aa5.01□□□□□ -1.61
ABCF3-206ENST00000466742 NEBP20929 6669 aa5□□□□□ -1.61
ABCF3-206ENST00000466742 MDN1Q9NU22 5596 aa4.99□□□□□ -1.61
ABCF3-206ENST00000466742 LCE5AQ5TCM9 118 aa4.95□□□□□ -1.62
ABCF3-206ENST00000466742 MT1MQ8N339 61 aa4.95□□□□□ -1.62
ABCF3-206ENST00000466742 LCE1AQ5T7P2 110 aa4.87□□□□□ -1.63
ABCF3-206ENST00000466742 KRTAP4-3Q9BYR4 195 aa4.84□□□□□ -1.63
ABCF3-206ENST00000466742 KRTAP2-2Q9BYT5 123 aa4.8□□□□□ -1.64
ABCF3-206ENST00000466742 SPRR2EP22531 72 aa4.79□□□□□ -1.64
ABCF3-206ENST00000466742 SPRR2BP35325 72 aa4.79□□□□□ -1.64
ABCF3-206ENST00000466742 SPRR2AP35326 72 aa4.79□□□□□ -1.64
ABCF3-206ENST00000466742 KRTAP20-1Q3LI63 56 aa4.75□□□□□ -1.65
ABCF3-206ENST00000466742 LOC100996750A0A140TA64 210 aa4.72□□□□□ -1.65
ABCF3-206ENST00000466742 DSTQ03001 7570 aaKnown RBP4.64□□□□□ -1.67
ABCF3-206ENST00000466742 SPRR2DP22532 72 aa4.62□□□□□ -1.67
ABCF3-206ENST00000466742 PRM1P04553 51 aa4.6□□□□□ -1.67
ABCF3-206ENST00000466742 MT1AP04731 61 aa4.57□□□□□ -1.68
ABCF3-206ENST00000466742 KRTAP5-5Q701N2 237 aaPredicted RBP4.56□□□□□ -1.68
ABCF3-206ENST00000466742 LCE3BQ5TA77 95 aa4.49□□□□□ -1.69
ABCF3-206ENST00000466742 KRTAP4-9Q9BYQ8 210 aa4.49□□□□□ -1.69
ABCF3-206ENST00000466742 LCE3EQ5T5B0 92 aa4.47□□□□□ -1.69
ABCF3-206ENST00000466742 LCE3DQ9BYE3 92 aa4.45□□□□□ -1.7
ABCF3-206ENST00000466742 KRTAP6-1Q3LI64 71 aa4.35□□□□□ -1.71
ABCF3-206ENST00000466742 SYNE1Q8NF91 8797 aaKnown RBP4.34□□□□□ -1.71
ABCF3-206ENST00000466742 LCE1EQ5T753 118 aa4.33□□□□□ -1.72
ABCF3-206ENST00000466742 KRTAP6-2Q3LI66 62 aa4.23□□□□□ -1.73
ABCF3-206ENST00000466742 KRTAP5-4Q6L8H1 288 aa4.23□□□□□ -1.73
ABCF3-206ENST00000466742 LCE1FQ5T754 118 aa4.18□□□□□ -1.74
ABCF3-206ENST00000466742 KRTAP9-4Q9BYQ2 154 aa4.17□□□□□ -1.74
ABCF3-206ENST00000466742 LCE1DQ5T752 114 aa4.16□□□□□ -1.74
ABCF3-206ENST00000466742 LCE4AQ5TA78 99 aa4.11□□□□□ -1.75
ABCF3-206ENST00000466742 MT4P47944 62 aa4.06□□□□□ -1.76
ABCF3-206ENST00000466742 HMCN1Q96RW7 5635 aa4.06□□□□□ -1.76
ABCF3-206ENST00000466742 KRTAP4-6Q9BYQ5 205 aa4□□□□□ -1.77
ABCF3-206ENST00000466742 MT3P25713 68 aa3.98□□□□□ -1.77
ABCF3-206ENST00000466742 KRTAP20-2Q3LI61 65 aa3.94□□□□□ -1.78
ABCF3-206ENST00000466742 GPR98Q8WXG9 6306 aa3.94□□□□□ -1.78
ABCF3-206ENST00000466742 KRTAP5-2Q701N4 177 aa3.85□□□□□ -1.79
ABCF3-206ENST00000466742 AHNAK2Q8IVF2 5795 aa3.84□□□□□ -1.79
ABCF3-206ENST00000466742 KRTAP5-3Q6L8H2 238 aa3.79□□□□□ -1.8
ABCF3-206ENST00000466742 OBSCNQ5VST9 7968 aa3.77□□□□□ -1.81
ABCF3-206ENST00000466742 KRTAP5-10Q6L8G5 202 aa3.72□□□□□ -1.81
ABCF3-206ENST00000466742 KRTAP5-7Q6L8G8 165 aa3.54□□□□□ -1.84
ABCF3-206ENST00000466742 KRTAP9-9Q9BYP9 154 aa3.5□□□□□ -1.85
ABCF3-206ENST00000466742 KRTAP4-11Q9BYQ6 195 aa3.44□□□□□ -1.86
ABCF3-206ENST00000466742 KRTAP5-8O75690 187 aa3.33□□□□□ -1.88
ABCF3-206ENST00000466742 KRTAP5-1Q6L8H4 278 aa3.32□□□□□ -1.88
ABCF3-206ENST00000466742 MUC5ACP98088 5654 aa3.21□□□□□ -1.89
ABCF3-206ENST00000466742 LCE1CQ5T751 118 aa3.21□□□□□ -1.89
ABCF3-206ENST00000466742 LCE1BQ5T7P3 118 aa3.21□□□□□ -1.89
ABCF3-206ENST00000466742 KRTAP4-2Q9BYR5 136 aa3.21□□□□□ -1.9
ABCF3-206ENST00000466742 MUC5BQ9HC84 5762 aaPredicted RBP3.16□□□□□ -1.9
ABCF3-206ENST00000466742 AHNAKQ09666 5890 aaKnown RBP3.06□□□□□ -1.92
ABCF3-206ENST00000466742 KRTAP4-12Q9BQ66 201 aa3.04□□□□□ -1.92
ABCF3-206ENST00000466742 KRTAP21-1Q3LI58 79 aa3.04□□□□□ -1.92
ABCF3-206ENST00000466742 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.03□□□□□ -1.92
ABCF3-206ENST00000466742 MUC19Q7Z5P9 8384 aa2.95□□□□□ -1.94
ABCF3-206ENST00000466742 KRTAP21-2Q3LI59 83 aa2.86□□□□□ -1.95
ABCF3-206ENST00000466742 KRTAP5-11Q6L8G4 156 aa2.82□□□□□ -1.96
ABCF3-206ENST00000466742 KRTAP4-4Q9BYR3 166 aa2.51□□□□□ -2.01
ABCF3-206ENST00000466742 PHGR1C9JFL3 82 aa2.42□□□□□ -2.02
ABCF3-206ENST00000466742 MUC16Q8WXI7 14507 aa1.58□□□□□ -2.16
Retrieved 78 of 20,778 RNA–protein pairs in 12.7 ms