RNA–Protein interactions for RNA: ENST00000466636.1

SRPRB-202, Transcript of SRP receptor subunit beta, humanhuman

TSL 3

Gene SRPRB, Length 917 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRPRB-202ENST00000466636 USH2AO75445 5202 aa3.89□□□□□ -1.79
SRPRB-202ENST00000466636 TNP1P09430 55 aa3.88□□□□□ -1.79
SRPRB-202ENST00000466636 SYNE2Q8WXH0 6885 aaKnown RBP3.87□□□□□ -1.79
SRPRB-202ENST00000466636 PRO2289Q9P1D8 64 aa3.87□□□□□ -1.79
SRPRB-202ENST00000466636 KRTAP10-7P60409 375 aaPredicted RBP3.84□□□□□ -1.79
SRPRB-202ENST00000466636 KRTAP19-6Q3LI70 58 aa3.82□□□□□ -1.8
SRPRB-202ENST00000466636 SSPOA2VEC9 5147 aa3.82□□□□□ -1.8
SRPRB-202ENST00000466636 FCGBPQ9Y6R7 5405 aaPredicted RBP3.8□□□□□ -1.8
SRPRB-202ENST00000466636 MACF1Q9UPN3 7388 aaKnown RBP3.79□□□□□ -1.8
SRPRB-202ENST00000466636 PP632Q6XCG6 107 aa3.77□□□□□ -1.81
SRPRB-202ENST00000466636 KRTAP2-2Q9BYT5 123 aa3.77□□□□□ -1.81
SRPRB-202ENST00000466636 KRTAP10-12P60413 245 aa3.75□□□□□ -1.81
SRPRB-202ENST00000466636 LCE3AQ5TA76 89 aa3.74□□□□□ -1.81
SRPRB-202ENST00000466636 KRTAP8-1Q8IUC2 63 aa3.67□□□□□ -1.82
SRPRB-202ENST00000466636 NEBP20929 6669 aa3.65□□□□□ -1.82
SRPRB-202ENST00000466636 LCE1FQ5T754 118 aa3.62□□□□□ -1.83
SRPRB-202ENST00000466636 KRTAP20-1Q3LI63 56 aa3.61□□□□□ -1.83
SRPRB-202ENST00000466636 KRTAP6-3Q3LI67 103 aa3.59□□□□□ -1.83
SRPRB-202ENST00000466636 KRTAP12-3P60328 96 aa3.58□□□□□ -1.84
SRPRB-202ENST00000466636 KRTAP19-5Q3LI72 72 aa3.58□□□□□ -1.84
SRPRB-202ENST00000466636 KRTAP19-7Q3SYF9 63 aa3.54□□□□□ -1.84
SRPRB-202ENST00000466636 KRTAP5-1Q6L8H4 278 aa3.54□□□□□ -1.84
SRPRB-202ENST00000466636 MUC12Q9UKN1 5478 aa3.52□□□□□ -1.85
SRPRB-202ENST00000466636 KRTAP5-9P26371 169 aa3.5□□□□□ -1.85
SRPRB-202ENST00000466636 LCE1EQ5T753 118 aa3.49□□□□□ -1.85
SRPRB-202ENST00000466636 KMT2DO14686 5537 aa3.48□□□□□ -1.85
SRPRB-202ENST00000466636 MT1EP04732 61 aa3.48□□□□□ -1.85
SRPRB-202ENST00000466636 KRTAP5-4Q6L8H1 288 aa3.46□□□□□ -1.86
SRPRB-202ENST00000466636 KRTAP4-4Q9BYR3 166 aa3.44□□□□□ -1.86
SRPRB-202ENST00000466636 MT1LQ93083 61 aa3.41□□□□□ -1.86
SRPRB-202ENST00000466636 GPR98Q8WXG9 6306 aa3.39□□□□□ -1.87
SRPRB-202ENST00000466636 SPRR5A0A1B0GTR4 108 aa3.39□□□□□ -1.87
SRPRB-202ENST00000466636 SPRR2FQ96RM1 72 aa3.37□□□□□ -1.87
SRPRB-202ENST00000466636 KRTAP2-3P0C7H8 128 aa3.35□□□□□ -1.87
SRPRB-202ENST00000466636 LCE3CQ5T5A8 94 aa3.35□□□□□ -1.87
SRPRB-202ENST00000466636 KRTAP2-4Q9BYR9 128 aa3.35□□□□□ -1.87
SRPRB-202ENST00000466636 MDN1Q9NU22 5596 aa3.33□□□□□ -1.88
SRPRB-202ENST00000466636 KRTAP19-3Q7Z4W3 81 aa3.32□□□□□ -1.88
SRPRB-202ENST00000466636 MT1GP13640 62 aa3.29□□□□□ -1.88
SRPRB-202ENST00000466636 MT1MQ8N339 61 aa3.27□□□□□ -1.89
SRPRB-202ENST00000466636 KRTAP4-3Q9BYR4 195 aa3.21□□□□□ -1.9
SRPRB-202ENST00000466636 KRTAP2-1Q9BYU5 128 aa3.21□□□□□ -1.9
SRPRB-202ENST00000466636 SPRR2EP22531 72 aa3.2□□□□□ -1.9
SRPRB-202ENST00000466636 SPRR2BP35325 72 aa3.2□□□□□ -1.9
SRPRB-202ENST00000466636 SPRR2AP35326 72 aa3.2□□□□□ -1.9
SRPRB-202ENST00000466636 LUZP6Q538Z0 58 aa3.2□□□□□ -1.9
SRPRB-202ENST00000466636 KRTAP9-6A8MVA2 160 aa3.19□□□□□ -1.9
SRPRB-202ENST00000466636 SPRR2DP22532 72 aa3.09□□□□□ -1.91
SRPRB-202ENST00000466636 LCE3EQ5T5B0 92 aa3.05□□□□□ -1.92
SRPRB-202ENST00000466636 OBSCNQ5VST9 7968 aa3.01□□□□□ -1.93
SRPRB-202ENST00000466636 DSTQ03001 7570 aaKnown RBP3□□□□□ -1.93
SRPRB-202ENST00000466636 KRTAP5-5Q701N2 237 aaPredicted RBP2.96□□□□□ -1.94
SRPRB-202ENST00000466636 KRTAP5-2Q701N4 177 aa2.96□□□□□ -1.94
SRPRB-202ENST00000466636 MT1AP04731 61 aa2.9□□□□□ -1.95
SRPRB-202ENST00000466636 AHNAK2Q8IVF2 5795 aa2.88□□□□□ -1.95
SRPRB-202ENST00000466636 HMCN1Q96RW7 5635 aa2.87□□□□□ -1.95
SRPRB-202ENST00000466636 KRTAP6-1Q3LI64 71 aa2.86□□□□□ -1.95
SRPRB-202ENST00000466636 KRTAP5-10Q6L8G5 202 aa2.84□□□□□ -1.95
SRPRB-202ENST00000466636 KRTAP5-7Q6L8G8 165 aa2.79□□□□□ -1.96
SRPRB-202ENST00000466636 SYNE1Q8NF91 8797 aaKnown RBP2.75□□□□□ -1.97
SRPRB-202ENST00000466636 MT4P47944 62 aa2.7□□□□□ -1.98
SRPRB-202ENST00000466636 KRTAP12-4P60329 112 aa2.7□□□□□ -1.98
SRPRB-202ENST00000466636 KRTAP6-2Q3LI66 62 aa2.63□□□□□ -1.99
SRPRB-202ENST00000466636 KRTAP20-2Q3LI61 65 aa2.62□□□□□ -1.99
SRPRB-202ENST00000466636 LCE3DQ9BYE3 92 aa2.62□□□□□ -1.99
SRPRB-202ENST00000466636 INE1O15225 51 aa2.61□□□□□ -1.99
SRPRB-202ENST00000466636 AHNAKQ09666 5890 aaKnown RBP2.58□□□□□ -2
SRPRB-202ENST00000466636 KRTAP5-8O75690 187 aa2.5□□□□□ -2.01
SRPRB-202ENST00000466636 MUC5ACP98088 5654 aa2.48□□□□□ -2.01
SRPRB-202ENST00000466636 MUC5BQ9HC84 5762 aaPredicted RBP2.43□□□□□ -2.02
SRPRB-202ENST00000466636 LCE1CQ5T751 118 aa2.22□□□□□ -2.05
SRPRB-202ENST00000466636 LCE1BQ5T7P3 118 aa2.22□□□□□ -2.05
SRPRB-202ENST00000466636 PRM1P04553 51 aa2.14□□□□□ -2.07
SRPRB-202ENST00000466636 MUC19Q7Z5P9 8384 aa1.9□□□□□ -2.1
SRPRB-202ENST00000466636 KRTAP21-2Q3LI59 83 aa1.88□□□□□ -2.11
SRPRB-202ENST00000466636 PHGR1C9JFL3 82 aa1.7□□□□□ -2.14
SRPRB-202ENST00000466636 KRTAP21-1Q3LI58 79 aa1.32□□□□□ -2.2
SRPRB-202ENST00000466636 MUC16Q8WXI7 14507 aa1.03□□□□□ -2.24
Retrieved 78 of 20,778 RNA–protein pairs in 115.3 ms