RNA–Protein interactions for RNA: ENST00000466579.1

SDCCAG3-208, Transcript of Serologically defined colon cancer antigen 3, humanhuman

TSL 1 (best)

Gene SDCCAG3, Length 496 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCCAG3-208ENST00000466579 A8MU10 97 aa3.66□□□□□ -1.82
SDCCAG3-208ENST00000466579 LCE1AQ5T7P2 110 aa3.66□□□□□ -1.82
SDCCAG3-208ENST00000466579 SPRR2EP22531 72 aa3.65□□□□□ -1.83
SDCCAG3-208ENST00000466579 SPRR2BP35325 72 aa3.65□□□□□ -1.83
SDCCAG3-208ENST00000466579 SPRR2AP35326 72 aa3.65□□□□□ -1.83
SDCCAG3-208ENST00000466579 Q1T7F1 81 aa3.63□□□□□ -1.83
SDCCAG3-208ENST00000466579 KRTAP20-1Q3LI63 56 aa3.62□□□□□ -1.83
SDCCAG3-208ENST00000466579 UQCR11O14957 56 aa3.59□□□□□ -1.83
SDCCAG3-208ENST00000466579 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.59□□□□□ -1.83
SDCCAG3-208ENST00000466579 KRTAP2-3P0C7H8 128 aa3.58□□□□□ -1.84
SDCCAG3-208ENST00000466579 KRTAP19-7Q3SYF9 63 aa3.58□□□□□ -1.84
SDCCAG3-208ENST00000466579 KRTAP2-4Q9BYR9 128 aa3.58□□□□□ -1.84
SDCCAG3-208ENST00000466579 C10orf95Q9H7T3 257 aa3.56□□□□□ -1.84
SDCCAG3-208ENST00000466579 MT1EP04732 61 aa3.53□□□□□ -1.84
SDCCAG3-208ENST00000466579 SPRR2DP22532 72 aa3.53□□□□□ -1.84
SDCCAG3-208ENST00000466579 MIR22HGQ0VDD5 57 aa3.52□□□□□ -1.85
SDCCAG3-208ENST00000466579 TNP1P09430 55 aa3.5□□□□□ -1.85
SDCCAG3-208ENST00000466579 PSPHP1O15172 72 aa3.49□□□□□ -1.85
SDCCAG3-208ENST00000466579 KRTAP19-5Q3LI72 72 aa3.48□□□□□ -1.85
SDCCAG3-208ENST00000466579 KRTAP19-3Q7Z4W3 81 aa3.47□□□□□ -1.85
SDCCAG3-208ENST00000466579 KRTAP2-2Q9BYT5 123 aa3.47□□□□□ -1.85
SDCCAG3-208ENST00000466579 KRTAP2-1Q9BYU5 128 aa3.47□□□□□ -1.85
SDCCAG3-208ENST00000466579 KRTAP5-11Q6L8G4 156 aa3.46□□□□□ -1.86
SDCCAG3-208ENST00000466579 LCE3AQ5TA76 89 aa3.45□□□□□ -1.86
SDCCAG3-208ENST00000466579 CDC42SE1Q9NRR8 79 aa3.45□□□□□ -1.86
SDCCAG3-208ENST00000466579 K7ERS5 55 aa3.41□□□□□ -1.86
SDCCAG3-208ENST00000466579 MT1GP13640 62 aa3.41□□□□□ -1.86
SDCCAG3-208ENST00000466579 KRTAP25-1Q3LHN0 102 aa3.39□□□□□ -1.87
SDCCAG3-208ENST00000466579 MT1LQ93083 61 aa3.39□□□□□ -1.87
SDCCAG3-208ENST00000466579 A6NED7 52 aa3.38□□□□□ -1.87
SDCCAG3-208ENST00000466579 PP632Q6XCG6 107 aa3.35□□□□□ -1.87
SDCCAG3-208ENST00000466579 MT1MQ8N339 61 aa3.35□□□□□ -1.87
SDCCAG3-208ENST00000466579 KRTAP12-3P60328 96 aa3.33□□□□□ -1.88
SDCCAG3-208ENST00000466579 DSTQ03001 7570 aaKnown RBP3.29□□□□□ -1.88
SDCCAG3-208ENST00000466579 LCE1EQ5T753 118 aa3.23□□□□□ -1.89
SDCCAG3-208ENST00000466579 KRTAP4-3Q9BYR4 195 aa3.23□□□□□ -1.89
SDCCAG3-208ENST00000466579 ROMO1P60602 79 aa3.22□□□□□ -1.89
SDCCAG3-208ENST00000466579 PRAC1Q96KF2 57 aa3.18□□□□□ -1.9
SDCCAG3-208ENST00000466579 KRTAP5-4Q6L8H1 288 aa3.16□□□□□ -1.9
SDCCAG3-208ENST00000466579 KRTAP5-1Q6L8H4 278 aa3.1□□□□□ -1.91
SDCCAG3-208ENST00000466579 KRTAP5-5Q701N2 237 aaPredicted RBP3.1□□□□□ -1.91
SDCCAG3-208ENST00000466579 HMCN1Q96RW7 5635 aa3.09□□□□□ -1.91
SDCCAG3-208ENST00000466579 LCE3CQ5T5A8 94 aa3.09□□□□□ -1.91
SDCCAG3-208ENST00000466579 MT4P47944 62 aa3.05□□□□□ -1.92
SDCCAG3-208ENST00000466579 GPR98Q8WXG9 6306 aa2.99□□□□□ -1.93
SDCCAG3-208ENST00000466579 LUZP6Q538Z0 58 aa2.98□□□□□ -1.93
SDCCAG3-208ENST00000466579 KRTAP4-4Q9BYR3 166 aa2.98□□□□□ -1.93
SDCCAG3-208ENST00000466579 SPRR5A0A1B0GTR4 108 aa2.97□□□□□ -1.93
SDCCAG3-208ENST00000466579 AHNAK2Q8IVF2 5795 aa2.95□□□□□ -1.94
SDCCAG3-208ENST00000466579 KRTAP20-2Q3LI61 65 aa2.94□□□□□ -1.94
SDCCAG3-208ENST00000466579 KRTAP12-4P60329 112 aa2.93□□□□□ -1.94
SDCCAG3-208ENST00000466579 KRTAP9-6A8MVA2 160 aa2.92□□□□□ -1.94
SDCCAG3-208ENST00000466579 NDUFAF8A1L188 74 aa2.91□□□□□ -1.94
SDCCAG3-208ENST00000466579 MT1AP04731 61 aa2.89□□□□□ -1.95
SDCCAG3-208ENST00000466579 SYNE1Q8NF91 8797 aaKnown RBP2.88□□□□□ -1.95
SDCCAG3-208ENST00000466579 KRTAP5-10Q6L8G5 202 aa2.86□□□□□ -1.95
SDCCAG3-208ENST00000466579 KRTAP6-1Q3LI64 71 aa2.85□□□□□ -1.95
SDCCAG3-208ENST00000466579 KRTAP5-2Q701N4 177 aa2.8□□□□□ -1.96
SDCCAG3-208ENST00000466579 MT3P25713 68 aa2.78□□□□□ -1.96
SDCCAG3-208ENST00000466579 KRTAP5-7Q6L8G8 165 aa2.75□□□□□ -1.97
SDCCAG3-208ENST00000466579 KRTAP6-2Q3LI66 62 aa2.69□□□□□ -1.98
SDCCAG3-208ENST00000466579 OBSCNQ5VST9 7968 aa2.67□□□□□ -1.98
SDCCAG3-208ENST00000466579 INE1O15225 51 aa2.58□□□□□ -2
SDCCAG3-208ENST00000466579 KRTAP5-8O75690 187 aa2.58□□□□□ -2
SDCCAG3-208ENST00000466579 LCE1FQ5T754 118 aa2.43□□□□□ -2.02
SDCCAG3-208ENST00000466579 MUC5ACP98088 5654 aa2.41□□□□□ -2.02
SDCCAG3-208ENST00000466579 MUC5BQ9HC84 5762 aaPredicted RBP2.4□□□□□ -2.02
SDCCAG3-208ENST00000466579 AHNAKQ09666 5890 aaKnown RBP2.38□□□□□ -2.03
SDCCAG3-208ENST00000466579 LCE1CQ5T751 118 aa2.24□□□□□ -2.05
SDCCAG3-208ENST00000466579 LCE1BQ5T7P3 118 aa2.24□□□□□ -2.05
SDCCAG3-208ENST00000466579 LCE3DQ9BYE3 92 aa2.24□□□□□ -2.05
SDCCAG3-208ENST00000466579 LCE3EQ5T5B0 92 aa2.13□□□□□ -2.07
SDCCAG3-208ENST00000466579 KRTAP21-2Q3LI59 83 aa1.9□□□□□ -2.11
SDCCAG3-208ENST00000466579 MUC19Q7Z5P9 8384 aa1.76□□□□□ -2.13
SDCCAG3-208ENST00000466579 PHGR1C9JFL3 82 aa1.74□□□□□ -2.13
SDCCAG3-208ENST00000466579 PRM1P04553 51 aa1.64□□□□□ -2.15
SDCCAG3-208ENST00000466579 KRTAP21-1Q3LI58 79 aa1.25□□□□□ -2.21
SDCCAG3-208ENST00000466579 MUC16Q8WXI7 14507 aa1.13□□□□□ -2.23
Retrieved 78 of 20,778 RNA–protein pairs in 83.7 ms