RNA–Protein interactions for RNA: ENST00000466448.4

SRSF4-202, Transcript of serine and arginine rich splicing factor 4, humanhuman

APPRIS ALT2 TSL 3

Gene SRSF4, Length 1,264 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF4-202ENST00000466448 MT1LQ93083 61 aa6.67□□□□□ -1.34
SRSF4-202ENST00000466448 KRTAP5-10Q6L8G5 202 aa6.66□□□□□ -1.34
SRSF4-202ENST00000466448 KRTAP5-4Q6L8H1 288 aa6.65□□□□□ -1.34
SRSF4-202ENST00000466448 A8MU10 97 aa6.63□□□□□ -1.35
SRSF4-202ENST00000466448 KRTAP4-3Q9BYR4 195 aa6.62□□□□□ -1.35
SRSF4-202ENST00000466448 KRTAP4-6Q9BYQ5 205 aa6.6□□□□□ -1.35
SRSF4-202ENST00000466448 UQCR11O14957 56 aa6.53□□□□□ -1.36
SRSF4-202ENST00000466448 C10orf95Q9H7T3 257 aa6.48□□□□□ -1.37
SRSF4-202ENST00000466448 LCE3AQ5TA76 89 aa6.46□□□□□ -1.38
SRSF4-202ENST00000466448 V9GYY9 64 aa6.46□□□□□ -1.38
SRSF4-202ENST00000466448 KRTAP5-7Q6L8G8 165 aa6.44□□□□□ -1.38
SRSF4-202ENST00000466448 TNP1P09430 55 aa6.41□□□□□ -1.38
SRSF4-202ENST00000466448 KRTAP5-3Q6L8H2 238 aa6.41□□□□□ -1.38
SRSF4-202ENST00000466448 MIR22HGQ0VDD5 57 aa6.38□□□□□ -1.39
SRSF4-202ENST00000466448 Q1T7F1 81 aa6.37□□□□□ -1.39
SRSF4-202ENST00000466448 KRTAP4-7Q9BYR0 210 aa6.34□□□□□ -1.39
SRSF4-202ENST00000466448 PSPHP1O15172 72 aa6.32□□□□□ -1.4
SRSF4-202ENST00000466448 KRTAP20-2Q3LI61 65 aa6.3□□□□□ -1.4
SRSF4-202ENST00000466448 K7ERS5 55 aa6.29□□□□□ -1.4
SRSF4-202ENST00000466448 PCP4P48539 62 aa6.22□□□□□ -1.41
SRSF4-202ENST00000466448 KRTAP5-5Q701N2 237 aaPredicted RBP6.22□□□□□ -1.41
SRSF4-202ENST00000466448 SPRR5A0A1B0GTR4 108 aa6.21□□□□□ -1.42
SRSF4-202ENST00000466448 KRTAP12-3P60328 96 aa6.2□□□□□ -1.42
SRSF4-202ENST00000466448 RPS28P62857 69 aaKnown RBP6.2□□□□□ -1.42
SRSF4-202ENST00000466448 A6NED7 52 aa6.15□□□□□ -1.42
SRSF4-202ENST00000466448 KRTAP25-1Q3LHN0 102 aa6.14□□□□□ -1.43
SRSF4-202ENST00000466448 KRTAP12-4P60329 112 aa6.12□□□□□ -1.43
SRSF4-202ENST00000466448 LOC100996750A0A140TA64 210 aa6.03□□□□□ -1.44
SRSF4-202ENST00000466448 SYNE1Q8NF91 8797 aaKnown RBP6.03□□□□□ -1.44
SRSF4-202ENST00000466448 KRTAP23-1A1A580 65 aa5.94□□□□□ -1.46
SRSF4-202ENST00000466448 CDC42SE1Q9NRR8 79 aa5.94□□□□□ -1.46
SRSF4-202ENST00000466448 ROMO1P60602 79 aa5.84□□□□□ -1.47
SRSF4-202ENST00000466448 KRTAP4-11Q9BYQ6 195 aa5.84□□□□□ -1.47
SRSF4-202ENST00000466448 KRTAP19-4Q3LI73 84 aa5.81□□□□□ -1.48
SRSF4-202ENST00000466448 KRTAP5-2Q701N4 177 aa5.76□□□□□ -1.49
SRSF4-202ENST00000466448 KRTAP15-1Q3LI76 137 aa5.72□□□□□ -1.49
SRSF4-202ENST00000466448 MUC5ACP98088 5654 aa5.68□□□□□ -1.5
SRSF4-202ENST00000466448 AHNAKQ09666 5890 aaKnown RBP5.68□□□□□ -1.5
SRSF4-202ENST00000466448 KRTAP5-8O75690 187 aa5.67□□□□□ -1.5
SRSF4-202ENST00000466448 LCE3CQ5T5A8 94 aa5.67□□□□□ -1.5
SRSF4-202ENST00000466448 KRTAP6-1Q3LI64 71 aa5.66□□□□□ -1.5
SRSF4-202ENST00000466448 MT1AP04731 61 aa5.65□□□□□ -1.5
SRSF4-202ENST00000466448 MUC5BQ9HC84 5762 aaPredicted RBP5.61□□□□□ -1.51
SRSF4-202ENST00000466448 OBSCNQ5VST9 7968 aa5.54□□□□□ -1.52
SRSF4-202ENST00000466448 KRTAP9-4Q9BYQ2 154 aa5.5□□□□□ -1.53
SRSF4-202ENST00000466448 KRTAP6-2Q3LI66 62 aa5.49□□□□□ -1.53
SRSF4-202ENST00000466448 SVIPQ8NHG7 77 aa5.49□□□□□ -1.53
SRSF4-202ENST00000466448 BRK1Q8WUW1 75 aa5.44□□□□□ -1.54
SRSF4-202ENST00000466448 KRTAP9-9Q9BYP9 154 aa5.42□□□□□ -1.54
SRSF4-202ENST00000466448 KRTAP9-6A8MVA2 160 aa5.4□□□□□ -1.54
SRSF4-202ENST00000466448 KRTAP5-1Q6L8H4 278 aa5.24□□□□□ -1.57
SRSF4-202ENST00000466448 KRTAP4-12Q9BQ66 201 aa5.19□□□□□ -1.58
SRSF4-202ENST00000466448 MT3P25713 68 aa5.18□□□□□ -1.58
SRSF4-202ENST00000466448 H3BS24 57 aa5.14□□□□□ -1.59
SRSF4-202ENST00000466448 PMAIP1Q13794 54 aa5.14□□□□□ -1.59
SRSF4-202ENST00000466448 PRO0628Q9UI54 55 aa4.87□□□□□ -1.63
SRSF4-202ENST00000466448 LCE1EQ5T753 118 aa4.86□□□□□ -1.63
SRSF4-202ENST00000466448 PRAC1Q96KF2 57 aa4.86□□□□□ -1.63
SRSF4-202ENST00000466448 KRTAP4-2Q9BYR5 136 aa4.64□□□□□ -1.67
SRSF4-202ENST00000466448 KTN1-AS1Q86SY8 53 aa4.63□□□□□ -1.67
SRSF4-202ENST00000466448 LCE1BQ5T7P3 118 aa4.62□□□□□ -1.67
SRSF4-202ENST00000466448 LCE1CQ5T751 118 aa4.51□□□□□ -1.69
SRSF4-202ENST00000466448 LUZP6Q538Z0 58 aa4.18□□□□□ -1.74
SRSF4-202ENST00000466448 KRTAP5-11Q6L8G4 156 aa4.13□□□□□ -1.75
SRSF4-202ENST00000466448 LCE1FQ5T754 118 aa4.08□□□□□ -1.76
SRSF4-202ENST00000466448 LCE3DQ9BYE3 92 aa4.08□□□□□ -1.76
SRSF4-202ENST00000466448 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.06□□□□□ -1.76
SRSF4-202ENST00000466448 PHGR1C9JFL3 82 aa3.89□□□□□ -1.79
SRSF4-202ENST00000466448 LCE3EQ5T5B0 92 aa3.86□□□□□ -1.79
SRSF4-202ENST00000466448 A0A0A0MQY5 61 aa3.8□□□□□ -1.8
SRSF4-202ENST00000466448 KRTAP21-2Q3LI59 83 aa3.74□□□□□ -1.81
SRSF4-202ENST00000466448 KRTAP4-4Q9BYR3 166 aa3.49□□□□□ -1.85
SRSF4-202ENST00000466448 NDUFAF8A1L188 74 aa3.42□□□□□ -1.86
SRSF4-202ENST00000466448 MUC19Q7Z5P9 8384 aa3.41□□□□□ -1.86
SRSF4-202ENST00000466448 PRM1P04553 51 aa2.97□□□□□ -1.93
SRSF4-202ENST00000466448 KRTAP21-1Q3LI58 79 aa2.95□□□□□ -1.94
SRSF4-202ENST00000466448 INE1O15225 51 aa2.82□□□□□ -1.96
SRSF4-202ENST00000466448 MUC16Q8WXI7 14507 aa2.37□□□□□ -2.03
Retrieved 78 of 20,778 RNA–protein pairs in 50 ms