RNA–Protein interactions for RNA: ENST00000466425.1

PSMB4-202, Transcript of proteasome subunit beta 4, humanhuman

TSL 2

Gene PSMB4, Length 665 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMB4-202ENST00000466425 PP632Q6XCG6 107 aa2.91□□□□□ -1.94
PSMB4-202ENST00000466425 MT1HP80294 61 aa2.9□□□□□ -1.95
PSMB4-202ENST00000466425 PLAC4Q8WY50 150 aa2.9□□□□□ -1.95
PSMB4-202ENST00000466425 C10orf95Q9H7T3 257 aa2.9□□□□□ -1.95
PSMB4-202ENST00000466425 SPRR2GQ9BYE4 73 aa2.89□□□□□ -1.95
PSMB4-202ENST00000466425 KRTAP10-12P60413 245 aa2.87□□□□□ -1.95
PSMB4-202ENST00000466425 LCE1FQ5T754 118 aa2.87□□□□□ -1.95
PSMB4-202ENST00000466425 TNP1P09430 55 aa2.86□□□□□ -1.95
PSMB4-202ENST00000466425 KRTAP10-10P60014 251 aa2.86□□□□□ -1.95
PSMB4-202ENST00000466425 KRTAP5-8O75690 187 aa2.84□□□□□ -1.95
PSMB4-202ENST00000466425 MT2AP02795 61 aa2.83□□□□□ -1.96
PSMB4-202ENST00000466425 MT1FP04733 61 aa2.81□□□□□ -1.96
PSMB4-202ENST00000466425 KRTAP19-8Q3LI54 63 aa2.79□□□□□ -1.96
PSMB4-202ENST00000466425 LCE3CQ5T5A8 94 aa2.75□□□□□ -1.97
PSMB4-202ENST00000466425 PRO2289Q9P1D8 64 aa2.72□□□□□ -1.97
PSMB4-202ENST00000466425 MT1BP07438 61 aa2.7□□□□□ -1.98
PSMB4-202ENST00000466425 CRCT1Q9UGL9 99 aa2.69□□□□□ -1.98
PSMB4-202ENST00000466425 MT1XP80297 61 aa2.65□□□□□ -1.99
PSMB4-202ENST00000466425 FSIP2Q5CZC0 6907 aa2.64□□□□□ -1.99
PSMB4-202ENST00000466425 LCE3AQ5TA76 89 aa2.63□□□□□ -1.99
PSMB4-202ENST00000466425 USH2AO75445 5202 aa2.62□□□□□ -1.99
PSMB4-202ENST00000466425 KRTAP8-1Q8IUC2 63 aa2.62□□□□□ -1.99
PSMB4-202ENST00000466425 SSPOA2VEC9 5147 aa2.57□□□□□ -2
PSMB4-202ENST00000466425 SPRR5A0A1B0GTR4 108 aa2.56□□□□□ -2
PSMB4-202ENST00000466425 KRTAP12-3P60328 96 aa2.56□□□□□ -2
PSMB4-202ENST00000466425 KRTAP19-6Q3LI70 58 aa2.55□□□□□ -2
PSMB4-202ENST00000466425 FCGBPQ9Y6R7 5405 aaPredicted RBP2.55□□□□□ -2
PSMB4-202ENST00000466425 LCE3EQ5T5B0 92 aa2.51□□□□□ -2.01
PSMB4-202ENST00000466425 KRTAP19-5Q3LI72 72 aa2.45□□□□□ -2.02
PSMB4-202ENST00000466425 MACF1Q9UPN3 7388 aaKnown RBP2.39□□□□□ -2.03
PSMB4-202ENST00000466425 KRTAP5-5Q701N2 237 aaPredicted RBP2.38□□□□□ -2.03
PSMB4-202ENST00000466425 KRTAP6-3Q3LI67 103 aa2.37□□□□□ -2.03
PSMB4-202ENST00000466425 SYNE2Q8WXH0 6885 aaKnown RBP2.35□□□□□ -2.03
PSMB4-202ENST00000466425 KRTAP19-7Q3SYF9 63 aa2.35□□□□□ -2.03
PSMB4-202ENST00000466425 LCE1CQ5T751 118 aa2.35□□□□□ -2.03
PSMB4-202ENST00000466425 LCE1BQ5T7P3 118 aa2.35□□□□□ -2.03
PSMB4-202ENST00000466425 MT1EP04732 61 aa2.33□□□□□ -2.04
PSMB4-202ENST00000466425 MT1LQ93083 61 aa2.31□□□□□ -2.04
PSMB4-202ENST00000466425 KMT2DO14686 5537 aa2.28□□□□□ -2.04
PSMB4-202ENST00000466425 INE1O15225 51 aa2.28□□□□□ -2.04
PSMB4-202ENST00000466425 MUC12Q9UKN1 5478 aa2.27□□□□□ -2.05
PSMB4-202ENST00000466425 MT1GP13640 62 aa2.24□□□□□ -2.05
PSMB4-202ENST00000466425 SPRR2FQ96RM1 72 aa2.23□□□□□ -2.05
PSMB4-202ENST00000466425 MDN1Q9NU22 5596 aa2.23□□□□□ -2.05
PSMB4-202ENST00000466425 KRTAP19-3Q7Z4W3 81 aa2.22□□□□□ -2.05
PSMB4-202ENST00000466425 NEBP20929 6669 aa2.21□□□□□ -2.06
PSMB4-202ENST00000466425 SPRR2EP22531 72 aa2.18□□□□□ -2.06
PSMB4-202ENST00000466425 SPRR2BP35325 72 aa2.18□□□□□ -2.06
PSMB4-202ENST00000466425 SPRR2AP35326 72 aa2.18□□□□□ -2.06
PSMB4-202ENST00000466425 MT1MQ8N339 61 aa2.18□□□□□ -2.06
PSMB4-202ENST00000466425 KRTAP2-3P0C7H8 128 aa2.16□□□□□ -2.06
PSMB4-202ENST00000466425 KRTAP20-1Q3LI63 56 aa2.16□□□□□ -2.06
PSMB4-202ENST00000466425 KRTAP2-4Q9BYR9 128 aa2.16□□□□□ -2.06
PSMB4-202ENST00000466425 KRTAP2-1Q9BYU5 128 aa2.16□□□□□ -2.06
PSMB4-202ENST00000466425 SPRR2DP22532 72 aa2.11□□□□□ -2.07
PSMB4-202ENST00000466425 HMCN1Q96RW7 5635 aa2.07□□□□□ -2.08
PSMB4-202ENST00000466425 GPR98Q8WXG9 6306 aa2.07□□□□□ -2.08
PSMB4-202ENST00000466425 LCE3DQ9BYE3 92 aa2.06□□□□□ -2.08
PSMB4-202ENST00000466425 MUC19Q7Z5P9 8384 aa2.05□□□□□ -2.08
PSMB4-202ENST00000466425 MT1AP04731 61 aa1.98□□□□□ -2.09
PSMB4-202ENST00000466425 DSTQ03001 7570 aaKnown RBP1.98□□□□□ -2.09
PSMB4-202ENST00000466425 KRTAP6-1Q3LI64 71 aa1.92□□□□□ -2.1
PSMB4-202ENST00000466425 KRTAP12-4P60329 112 aa1.88□□□□□ -2.11
PSMB4-202ENST00000466425 KRTAP5-7Q6L8G8 165 aa1.87□□□□□ -2.11
PSMB4-202ENST00000466425 MT4P47944 62 aa1.81□□□□□ -2.12
PSMB4-202ENST00000466425 AHNAK2Q8IVF2 5795 aa1.78□□□□□ -2.13
PSMB4-202ENST00000466425 KRTAP6-2Q3LI66 62 aa1.75□□□□□ -2.13
PSMB4-202ENST00000466425 SYNE1Q8NF91 8797 aaKnown RBP1.74□□□□□ -2.13
PSMB4-202ENST00000466425 KRTAP21-2Q3LI59 83 aa1.74□□□□□ -2.13
PSMB4-202ENST00000466425 KRTAP20-2Q3LI61 65 aa1.74□□□□□ -2.13
PSMB4-202ENST00000466425 KRTAP5-10Q6L8G5 202 aa1.68□□□□□ -2.14
PSMB4-202ENST00000466425 AHNAKQ09666 5890 aaKnown RBP1.62□□□□□ -2.15
PSMB4-202ENST00000466425 PRM1P04553 51 aa1.62□□□□□ -2.15
PSMB4-202ENST00000466425 MUC5BQ9HC84 5762 aaPredicted RBP1.54□□□□□ -2.16
PSMB4-202ENST00000466425 MUC5ACP98088 5654 aa1.47□□□□□ -2.17
PSMB4-202ENST00000466425 PHGR1C9JFL3 82 aa1.04□□□□□ -2.24
PSMB4-202ENST00000466425 KRTAP21-1Q3LI58 79 aa1.03□□□□□ -2.24
PSMB4-202ENST00000466425 MUC16Q8WXI7 14507 aa0.75□□□□□ -2.29
Retrieved 78 of 20,778 RNA–protein pairs in 11.9 ms