RNA–Protein interactions for RNA: ENST00000466391.1

LSG1-206, Transcript of large 60S subunit nuclear export GTPase 1, humanhuman

TSL 2

Gene LSG1, Length 791 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSG1-206ENST00000466391 CRCT1Q9UGL9 99 aa3.66□□□□□ -1.82
LSG1-206ENST00000466391 KRTAP5-9P26371 169 aa3.64□□□□□ -1.83
LSG1-206ENST00000466391 LCE3DQ9BYE3 92 aa3.64□□□□□ -1.83
LSG1-206ENST00000466391 C10orf95Q9H7T3 257 aa3.63□□□□□ -1.83
LSG1-206ENST00000466391 SPRR2GQ9BYE4 73 aa3.59□□□□□ -1.83
LSG1-206ENST00000466391 OBSCNQ5VST9 7968 aa3.58□□□□□ -1.84
LSG1-206ENST00000466391 MT1HP80294 61 aa3.58□□□□□ -1.84
LSG1-206ENST00000466391 PP632Q6XCG6 107 aa3.56□□□□□ -1.84
LSG1-206ENST00000466391 KRTAP5-5Q701N2 237 aaPredicted RBP3.55□□□□□ -1.84
LSG1-206ENST00000466391 KRTAP4-3Q9BYR4 195 aa3.54□□□□□ -1.84
LSG1-206ENST00000466391 MT2AP02795 61 aa3.5□□□□□ -1.85
LSG1-206ENST00000466391 M0R2T5 61 aa3.49□□□□□ -1.85
LSG1-206ENST00000466391 MT1FP04733 61 aa3.48□□□□□ -1.85
LSG1-206ENST00000466391 TNP1P09430 55 aa3.47□□□□□ -1.85
LSG1-206ENST00000466391 KRTAP19-8Q3LI54 63 aa3.47□□□□□ -1.85
LSG1-206ENST00000466391 PLAC4Q8WY50 150 aa3.47□□□□□ -1.85
LSG1-206ENST00000466391 SPRR5A0A1B0GTR4 108 aa3.44□□□□□ -1.86
LSG1-206ENST00000466391 KRTAP10-10P60014 251 aa3.44□□□□□ -1.86
LSG1-206ENST00000466391 MT1BP07438 61 aa3.37□□□□□ -1.87
LSG1-206ENST00000466391 LCE1CQ5T751 118 aa3.33□□□□□ -1.88
LSG1-206ENST00000466391 LCE1BQ5T7P3 118 aa3.33□□□□□ -1.88
LSG1-206ENST00000466391 MT1XP80297 61 aa3.31□□□□□ -1.88
LSG1-206ENST00000466391 KRTAP8-1Q8IUC2 63 aa3.27□□□□□ -1.89
LSG1-206ENST00000466391 PRO2289Q9P1D8 64 aa3.24□□□□□ -1.89
LSG1-206ENST00000466391 SYNE2Q8WXH0 6885 aaKnown RBP3.23□□□□□ -1.89
LSG1-206ENST00000466391 MACF1Q9UPN3 7388 aaKnown RBP3.21□□□□□ -1.9
LSG1-206ENST00000466391 SSPOA2VEC9 5147 aa3.2□□□□□ -1.9
LSG1-206ENST00000466391 LUZP6Q538Z0 58 aa3.2□□□□□ -1.9
LSG1-206ENST00000466391 FCGBPQ9Y6R7 5405 aaPredicted RBP3.19□□□□□ -1.9
LSG1-206ENST00000466391 USH2AO75445 5202 aa3.16□□□□□ -1.9
LSG1-206ENST00000466391 KRTAP12-3P60328 96 aa3.14□□□□□ -1.91
LSG1-206ENST00000466391 KRTAP6-3Q3LI67 103 aa3.11□□□□□ -1.91
LSG1-206ENST00000466391 KRTAP5-2Q701N4 177 aa3.07□□□□□ -1.92
LSG1-206ENST00000466391 NEBP20929 6669 aa3.06□□□□□ -1.92
LSG1-206ENST00000466391 KRTAP19-6Q3LI70 58 aa3.04□□□□□ -1.92
LSG1-206ENST00000466391 KRTAP19-5Q3LI72 72 aa3.02□□□□□ -1.93
LSG1-206ENST00000466391 KRTAP20-1Q3LI63 56 aa3□□□□□ -1.93
LSG1-206ENST00000466391 KRTAP19-7Q3SYF9 63 aa2.96□□□□□ -1.94
LSG1-206ENST00000466391 MUC12Q9UKN1 5478 aa2.9□□□□□ -1.95
LSG1-206ENST00000466391 MT1EP04732 61 aa2.89□□□□□ -1.95
LSG1-206ENST00000466391 KRTAP2-3P0C7H8 128 aa2.87□□□□□ -1.95
LSG1-206ENST00000466391 MT1LQ93083 61 aa2.87□□□□□ -1.95
LSG1-206ENST00000466391 KRTAP2-4Q9BYR9 128 aa2.87□□□□□ -1.95
LSG1-206ENST00000466391 GPR98Q8WXG9 6306 aa2.82□□□□□ -1.96
LSG1-206ENST00000466391 KMT2DO14686 5537 aa2.81□□□□□ -1.96
LSG1-206ENST00000466391 INE1O15225 51 aa2.78□□□□□ -1.96
LSG1-206ENST00000466391 KRTAP5-7Q6L8G8 165 aa2.77□□□□□ -1.97
LSG1-206ENST00000466391 KRTAP2-1Q9BYU5 128 aa2.76□□□□□ -1.97
LSG1-206ENST00000466391 MDN1Q9NU22 5596 aa2.76□□□□□ -1.97
LSG1-206ENST00000466391 MT1GP13640 62 aa2.74□□□□□ -1.97
LSG1-206ENST00000466391 KRTAP19-3Q7Z4W3 81 aa2.73□□□□□ -1.97
LSG1-206ENST00000466391 MT1MQ8N339 61 aa2.7□□□□□ -1.98
LSG1-206ENST00000466391 MUC19Q7Z5P9 8384 aa2.66□□□□□ -1.98
LSG1-206ENST00000466391 SPRR2EP22531 72 aa2.66□□□□□ -1.98
LSG1-206ENST00000466391 SPRR2BP35325 72 aa2.66□□□□□ -1.98
LSG1-206ENST00000466391 SPRR2AP35326 72 aa2.66□□□□□ -1.98
LSG1-206ENST00000466391 KRTAP12-4P60329 112 aa2.65□□□□□ -1.99
LSG1-206ENST00000466391 SPRR2FQ96RM1 72 aa2.63□□□□□ -1.99
LSG1-206ENST00000466391 SPRR2DP22532 72 aa2.58□□□□□ -2
LSG1-206ENST00000466391 DSTQ03001 7570 aaKnown RBP2.52□□□□□ -2.01
LSG1-206ENST00000466391 KRTAP5-8O75690 187 aa2.46□□□□□ -2.02
LSG1-206ENST00000466391 MT1AP04731 61 aa2.46□□□□□ -2.02
LSG1-206ENST00000466391 KRTAP6-1Q3LI64 71 aa2.39□□□□□ -2.03
LSG1-206ENST00000466391 KRTAP5-10Q6L8G5 202 aa2.37□□□□□ -2.03
LSG1-206ENST00000466391 KRTAP21-2Q3LI59 83 aa2.36□□□□□ -2.03
LSG1-206ENST00000466391 AHNAK2Q8IVF2 5795 aa2.36□□□□□ -2.03
LSG1-206ENST00000466391 HMCN1Q96RW7 5635 aa2.3□□□□□ -2.04
LSG1-206ENST00000466391 MT4P47944 62 aa2.27□□□□□ -2.05
LSG1-206ENST00000466391 SYNE1Q8NF91 8797 aaKnown RBP2.22□□□□□ -2.05
LSG1-206ENST00000466391 AHNAKQ09666 5890 aaKnown RBP2.15□□□□□ -2.06
LSG1-206ENST00000466391 KRTAP6-2Q3LI66 62 aa2.15□□□□□ -2.07
LSG1-206ENST00000466391 MUC5BQ9HC84 5762 aaPredicted RBP2.08□□□□□ -2.08
LSG1-206ENST00000466391 KRTAP20-2Q3LI61 65 aa2.08□□□□□ -2.08
LSG1-206ENST00000466391 PRM1P04553 51 aa2.02□□□□□ -2.09
LSG1-206ENST00000466391 MUC5ACP98088 5654 aa2.02□□□□□ -2.09
LSG1-206ENST00000466391 PHGR1C9JFL3 82 aa1.38□□□□□ -2.19
LSG1-206ENST00000466391 KRTAP21-1Q3LI58 79 aa1.33□□□□□ -2.2
LSG1-206ENST00000466391 MUC16Q8WXI7 14507 aa1.3□□□□□ -2.2
Retrieved 78 of 20,778 RNA–protein pairs in 55.6 ms