RNA–Protein interactions for RNA: ENST00000466175.5

LETM1-202, Transcript of leucine zipper and EF-hand containing transmembrane protein 1, humanhuman

TSL 2

Gene LETM1, Length 1,626 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETM1-202ENST00000466175 KMT2DO14686 5537 aa6.66□□□□□ -1.34
LETM1-202ENST00000466175 KRTAP19-7Q3SYF9 63 aa6.63□□□□□ -1.35
LETM1-202ENST00000466175 LCE3CQ5T5A8 94 aa6.63□□□□□ -1.35
LETM1-202ENST00000466175 KRTAP5-9P26371 169 aa6.61□□□□□ -1.35
LETM1-202ENST00000466175 SPRR2FQ96RM1 72 aa6.54□□□□□ -1.36
LETM1-202ENST00000466175 MUC12Q9UKN1 5478 aa6.51□□□□□ -1.37
LETM1-202ENST00000466175 MT1EP04732 61 aa6.5□□□□□ -1.37
LETM1-202ENST00000466175 NEBP20929 6669 aa6.46□□□□□ -1.38
LETM1-202ENST00000466175 MT1LQ93083 61 aa6.44□□□□□ -1.38
LETM1-202ENST00000466175 SPRR2EP22531 72 aa6.38□□□□□ -1.39
LETM1-202ENST00000466175 SPRR2BP35325 72 aa6.38□□□□□ -1.39
LETM1-202ENST00000466175 SPRR2AP35326 72 aa6.38□□□□□ -1.39
LETM1-202ENST00000466175 MDN1Q9NU22 5596 aa6.37□□□□□ -1.39
LETM1-202ENST00000466175 LCE1AQ5T7P2 110 aa6.32□□□□□ -1.4
LETM1-202ENST00000466175 KRTAP4-7Q9BYR0 210 aa6.22□□□□□ -1.41
LETM1-202ENST00000466175 KRTAP9-6A8MVA2 160 aa6.21□□□□□ -1.41
LETM1-202ENST00000466175 KRTAP20-1Q3LI63 56 aa6.21□□□□□ -1.41
LETM1-202ENST00000466175 MT1GP13640 62 aa6.18□□□□□ -1.42
LETM1-202ENST00000466175 KRTAP19-3Q7Z4W3 81 aa6.18□□□□□ -1.42
LETM1-202ENST00000466175 SPRR2DP22532 72 aa6.15□□□□□ -1.42
LETM1-202ENST00000466175 INE1O15225 51 aa6.14□□□□□ -1.43
LETM1-202ENST00000466175 KRTAP2-3P0C7H8 128 aa6.1□□□□□ -1.43
LETM1-202ENST00000466175 MT1MQ8N339 61 aa6.1□□□□□ -1.43
LETM1-202ENST00000466175 KRTAP2-4Q9BYR9 128 aa6.1□□□□□ -1.43
LETM1-202ENST00000466175 LCE5AQ5TCM9 118 aa6.01□□□□□ -1.45
LETM1-202ENST00000466175 KRTAP2-1Q9BYU5 128 aa6.01□□□□□ -1.45
LETM1-202ENST00000466175 LCE3BQ5TA77 95 aa5.96□□□□□ -1.46
LETM1-202ENST00000466175 KRTAP4-3Q9BYR4 195 aa5.94□□□□□ -1.46
LETM1-202ENST00000466175 KRTAP2-2Q9BYT5 123 aa5.92□□□□□ -1.46
LETM1-202ENST00000466175 LOC100996750A0A140TA64 210 aa5.83□□□□□ -1.48
LETM1-202ENST00000466175 DSTQ03001 7570 aaKnown RBP5.81□□□□□ -1.48
LETM1-202ENST00000466175 KRTAP4-9Q9BYQ8 210 aa5.53□□□□□ -1.52
LETM1-202ENST00000466175 MT1AP04731 61 aa5.48□□□□□ -1.53
LETM1-202ENST00000466175 KRTAP5-5Q701N2 237 aaPredicted RBP5.45□□□□□ -1.54
LETM1-202ENST00000466175 MT4P47944 62 aa5.41□□□□□ -1.54
LETM1-202ENST00000466175 KRTAP6-1Q3LI64 71 aa5.4□□□□□ -1.55
LETM1-202ENST00000466175 LCE1DQ5T752 114 aa5.4□□□□□ -1.55
LETM1-202ENST00000466175 LCE4AQ5TA78 99 aa5.39□□□□□ -1.55
LETM1-202ENST00000466175 KRTAP5-4Q6L8H1 288 aa5.36□□□□□ -1.55
LETM1-202ENST00000466175 KRTAP4-6Q9BYQ5 205 aa5.27□□□□□ -1.57
LETM1-202ENST00000466175 HMCN1Q96RW7 5635 aa5.24□□□□□ -1.57
LETM1-202ENST00000466175 KRTAP9-4Q9BYQ2 154 aa5.18□□□□□ -1.58
LETM1-202ENST00000466175 KRTAP12-4P60329 112 aa5.16□□□□□ -1.58
LETM1-202ENST00000466175 KRTAP20-2Q3LI61 65 aa5.07□□□□□ -1.6
LETM1-202ENST00000466175 LCE3DQ9BYE3 92 aa5.05□□□□□ -1.6
LETM1-202ENST00000466175 GPR98Q8WXG9 6306 aa5.02□□□□□ -1.61
LETM1-202ENST00000466175 SYNE1Q8NF91 8797 aaKnown RBP5.02□□□□□ -1.61
LETM1-202ENST00000466175 MT3P25713 68 aa4.97□□□□□ -1.61
LETM1-202ENST00000466175 LCE3EQ5T5B0 92 aa4.97□□□□□ -1.61
LETM1-202ENST00000466175 AHNAK2Q8IVF2 5795 aa4.91□□□□□ -1.62
LETM1-202ENST00000466175 KRTAP6-2Q3LI66 62 aa4.9□□□□□ -1.62
LETM1-202ENST00000466175 KRTAP5-3Q6L8H2 238 aa4.9□□□□□ -1.63
LETM1-202ENST00000466175 KRTAP5-10Q6L8G5 202 aa4.84□□□□□ -1.63
LETM1-202ENST00000466175 KRTAP5-2Q701N4 177 aa4.75□□□□□ -1.65
LETM1-202ENST00000466175 KRTAP5-7Q6L8G8 165 aa4.59□□□□□ -1.67
LETM1-202ENST00000466175 KRTAP4-11Q9BYQ6 195 aa4.57□□□□□ -1.68
LETM1-202ENST00000466175 PRM1P04553 51 aa4.5□□□□□ -1.69
LETM1-202ENST00000466175 OBSCNQ5VST9 7968 aa4.48□□□□□ -1.69
LETM1-202ENST00000466175 KRTAP5-8O75690 187 aa4.4□□□□□ -1.7
LETM1-202ENST00000466175 LCE1EQ5T753 118 aa4.23□□□□□ -1.73
LETM1-202ENST00000466175 KRTAP5-1Q6L8H4 278 aa4.22□□□□□ -1.73
LETM1-202ENST00000466175 KRTAP9-9Q9BYP9 154 aa4.12□□□□□ -1.75
LETM1-202ENST00000466175 MUC5ACP98088 5654 aa4.02□□□□□ -1.77
LETM1-202ENST00000466175 MUC5BQ9HC84 5762 aaPredicted RBP3.99□□□□□ -1.77
LETM1-202ENST00000466175 LCE1BQ5T7P3 118 aa3.94□□□□□ -1.78
LETM1-202ENST00000466175 LCE1CQ5T751 118 aa3.93□□□□□ -1.78
LETM1-202ENST00000466175 AHNAKQ09666 5890 aaKnown RBP3.91□□□□□ -1.78
LETM1-202ENST00000466175 KRTAP4-2Q9BYR5 136 aa3.89□□□□□ -1.79
LETM1-202ENST00000466175 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.73□□□□□ -1.81
LETM1-202ENST00000466175 KRTAP21-2Q3LI59 83 aa3.53□□□□□ -1.84
LETM1-202ENST00000466175 KRTAP4-12Q9BQ66 201 aa3.51□□□□□ -1.85
LETM1-202ENST00000466175 KRTAP5-11Q6L8G4 156 aa3.43□□□□□ -1.86
LETM1-202ENST00000466175 LCE1FQ5T754 118 aa3.23□□□□□ -1.89
LETM1-202ENST00000466175 KRTAP4-4Q9BYR3 166 aa3.06□□□□□ -1.92
LETM1-202ENST00000466175 PHGR1C9JFL3 82 aa2.97□□□□□ -1.93
LETM1-202ENST00000466175 KRTAP21-1Q3LI58 79 aa2.84□□□□□ -1.95
LETM1-202ENST00000466175 MUC19Q7Z5P9 8384 aa2.71□□□□□ -1.98
LETM1-202ENST00000466175 MUC16Q8WXI7 14507 aa1.96□□□□□ -2.1
Retrieved 78 of 20,778 RNA–protein pairs in 131.7 ms