RNA–Protein interactions for RNA: ENST00000466034.5

SOX2-OT-203, SOX2 overlapping transcript, humanhuman

TSL 1 (best) BASIC

Gene SOX2-OT, Length 926 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-203ENST00000466034 SPINT4Q6UDR6 99 aa4.5□□□□□ -1.69
SOX2-OT-203ENST00000466034 A0A1B0GU33 70 aa4.49□□□□□ -1.69
SOX2-OT-203ENST00000466034 KRTAP12-1P59990 96 aa4.49□□□□□ -1.69
SOX2-OT-203ENST00000466034 LCE1FQ5T754 118 aa4.49□□□□□ -1.69
SOX2-OT-203ENST00000466034 PP632Q6XCG6 107 aa4.48□□□□□ -1.69
SOX2-OT-203ENST00000466034 COX7CP15954 63 aa4.47□□□□□ -1.69
SOX2-OT-203ENST00000466034 HMCN1Q96RW7 5635 aa4.47□□□□□ -1.69
SOX2-OT-203ENST00000466034 MT1MQ8N339 61 aa4.45□□□□□ -1.7
SOX2-OT-203ENST00000466034 MT1LQ93083 61 aa4.43□□□□□ -1.7
SOX2-OT-203ENST00000466034 ANAPC13Q9BS18 74 aa4.43□□□□□ -1.7
SOX2-OT-203ENST00000466034 SMIM26A0A096LP01 95 aa4.39□□□□□ -1.71
SOX2-OT-203ENST00000466034 AHNAK2Q8IVF2 5795 aa4.38□□□□□ -1.71
SOX2-OT-203ENST00000466034 H7BZZ5 65 aa4.38□□□□□ -1.71
SOX2-OT-203ENST00000466034 MT4P47944 62 aa4.36□□□□□ -1.71
SOX2-OT-203ENST00000466034 KRTAP5-4Q6L8H1 288 aa4.35□□□□□ -1.71
SOX2-OT-203ENST00000466034 LCE3AQ5TA76 89 aa4.34□□□□□ -1.71
SOX2-OT-203ENST00000466034 C10orf95Q9H7T3 257 aa4.34□□□□□ -1.71
SOX2-OT-203ENST00000466034 A0A1B0GU69 56 aa4.33□□□□□ -1.72
SOX2-OT-203ENST00000466034 A8MU10 97 aa4.32□□□□□ -1.72
SOX2-OT-203ENST00000466034 TNP1P09430 55 aa4.32□□□□□ -1.72
SOX2-OT-203ENST00000466034 KRTAP4-3Q9BYR4 195 aa4.31□□□□□ -1.72
SOX2-OT-203ENST00000466034 ATP5EP56381 51 aaPredicted RBP4.28□□□□□ -1.72
SOX2-OT-203ENST00000466034 CCDC179H3BU77 68 aa4.27□□□□□ -1.73
SOX2-OT-203ENST00000466034 KRTAP5-10Q6L8G5 202 aa4.24□□□□□ -1.73
SOX2-OT-203ENST00000466034 TMEM258P61165 79 aa4.2□□□□□ -1.74
SOX2-OT-203ENST00000466034 KRTAP12-3P60328 96 aa4.18□□□□□ -1.74
SOX2-OT-203ENST00000466034 LCE3CQ5T5A8 94 aa4.17□□□□□ -1.74
SOX2-OT-203ENST00000466034 PRR15LQ9BU68 103 aa4.17□□□□□ -1.74
SOX2-OT-203ENST00000466034 LINC01558Q9Y6Z2 57 aa4.12□□□□□ -1.75
SOX2-OT-203ENST00000466034 KRTAP5-7Q6L8G8 165 aa4.11□□□□□ -1.75
SOX2-OT-203ENST00000466034 KRTAP5-5Q701N2 237 aaPredicted RBP4.11□□□□□ -1.75
SOX2-OT-203ENST00000466034 KRTAP20-2Q3LI61 65 aa4.1□□□□□ -1.75
SOX2-OT-203ENST00000466034 SPRR5A0A1B0GTR4 108 aa4.08□□□□□ -1.76
SOX2-OT-203ENST00000466034 UQCR11O14957 56 aa4.03□□□□□ -1.76
SOX2-OT-203ENST00000466034 LCE1EQ5T753 118 aa4.03□□□□□ -1.76
SOX2-OT-203ENST00000466034 KRTAP12-4P60329 112 aa4.02□□□□□ -1.77
SOX2-OT-203ENST00000466034 KRTAP25-1Q3LHN0 102 aa4.02□□□□□ -1.77
SOX2-OT-203ENST00000466034 V9GYY9 64 aa3.99□□□□□ -1.77
SOX2-OT-203ENST00000466034 SYNE1Q8NF91 8797 aaKnown RBP3.97□□□□□ -1.77
SOX2-OT-203ENST00000466034 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.92□□□□□ -1.78
SOX2-OT-203ENST00000466034 MIR22HGQ0VDD5 57 aa3.91□□□□□ -1.78
SOX2-OT-203ENST00000466034 Q1T7F1 81 aa3.9□□□□□ -1.79
SOX2-OT-203ENST00000466034 RPS28P62857 69 aaKnown RBP3.88□□□□□ -1.79
SOX2-OT-203ENST00000466034 KRTAP5-11Q6L8G4 156 aa3.88□□□□□ -1.79
SOX2-OT-203ENST00000466034 K7ERS5 55 aa3.87□□□□□ -1.79
SOX2-OT-203ENST00000466034 PSPHP1O15172 72 aa3.84□□□□□ -1.79
SOX2-OT-203ENST00000466034 LCE3EQ5T5B0 92 aa3.81□□□□□ -1.8
SOX2-OT-203ENST00000466034 KRTAP5-2Q701N4 177 aa3.79□□□□□ -1.8
SOX2-OT-203ENST00000466034 A6NED7 52 aa3.77□□□□□ -1.81
SOX2-OT-203ENST00000466034 MT1AP04731 61 aa3.77□□□□□ -1.81
SOX2-OT-203ENST00000466034 KRTAP6-1Q3LI64 71 aa3.74□□□□□ -1.81
SOX2-OT-203ENST00000466034 KRTAP9-6A8MVA2 160 aa3.71□□□□□ -1.82
SOX2-OT-203ENST00000466034 KRTAP5-8O75690 187 aa3.66□□□□□ -1.82
SOX2-OT-203ENST00000466034 MUC5BQ9HC84 5762 aaPredicted RBP3.66□□□□□ -1.82
SOX2-OT-203ENST00000466034 CDC42SE1Q9NRR8 79 aa3.65□□□□□ -1.83
SOX2-OT-203ENST00000466034 AHNAKQ09666 5890 aaKnown RBP3.64□□□□□ -1.83
SOX2-OT-203ENST00000466034 KRTAP6-2Q3LI66 62 aa3.6□□□□□ -1.83
SOX2-OT-203ENST00000466034 ROMO1P60602 79 aa3.59□□□□□ -1.83
SOX2-OT-203ENST00000466034 MUC5ACP98088 5654 aa3.58□□□□□ -1.84
SOX2-OT-203ENST00000466034 OBSCNQ5VST9 7968 aa3.52□□□□□ -1.85
SOX2-OT-203ENST00000466034 BRK1Q8WUW1 75 aa3.44□□□□□ -1.86
SOX2-OT-203ENST00000466034 KRTAP5-1Q6L8H4 278 aa3.42□□□□□ -1.86
SOX2-OT-203ENST00000466034 LUZP6Q538Z0 58 aa3.29□□□□□ -1.88
SOX2-OT-203ENST00000466034 KRTAP4-4Q9BYR3 166 aa3.26□□□□□ -1.89
SOX2-OT-203ENST00000466034 PMAIP1Q13794 54 aa3.25□□□□□ -1.89
SOX2-OT-203ENST00000466034 LCE3DQ9BYE3 92 aa3.23□□□□□ -1.89
SOX2-OT-203ENST00000466034 PRO0628Q9UI54 55 aa3.21□□□□□ -1.9
SOX2-OT-203ENST00000466034 KTN1-AS1Q86SY8 53 aa3□□□□□ -1.93
SOX2-OT-203ENST00000466034 LCE1CQ5T751 118 aa2.99□□□□□ -1.93
SOX2-OT-203ENST00000466034 LCE1BQ5T7P3 118 aa2.99□□□□□ -1.93
SOX2-OT-203ENST00000466034 KRTAP21-2Q3LI59 83 aa2.48□□□□□ -2.01
SOX2-OT-203ENST00000466034 PHGR1C9JFL3 82 aa2.46□□□□□ -2.02
SOX2-OT-203ENST00000466034 MUC19Q7Z5P9 8384 aa2.18□□□□□ -2.06
SOX2-OT-203ENST00000466034 INE1O15225 51 aa1.9□□□□□ -2.11
SOX2-OT-203ENST00000466034 KRTAP21-1Q3LI58 79 aa1.89□□□□□ -2.11
SOX2-OT-203ENST00000466034 PRM1P04553 51 aa1.81□□□□□ -2.12
SOX2-OT-203ENST00000466034 MUC16Q8WXI7 14507 aa1.6□□□□□ -2.15
Retrieved 77 of 20,778 RNA–protein pairs in 39.8 ms