RNA–Protein interactions for RNA: ENST00000466032.1

CHMP3-206, Transcript of charged multivesicular body protein 3, humanhuman

TSL 2

Gene CHMP3, Length 436 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-206ENST00000466032 SPRR2GQ9BYE4 73 aa2.73□□□□□ -1.97
CHMP3-206ENST00000466032 MT1FP04733 61 aa2.71□□□□□ -1.98
CHMP3-206ENST00000466032 PLAC4Q8WY50 150 aa2.69□□□□□ -1.98
CHMP3-206ENST00000466032 PP632Q6XCG6 107 aa2.68□□□□□ -1.98
CHMP3-206ENST00000466032 KRTAP19-8Q3LI54 63 aa2.66□□□□□ -1.98
CHMP3-206ENST00000466032 FSIP2Q5CZC0 6907 aa2.65□□□□□ -1.99
CHMP3-206ENST00000466032 KRTAP13-4Q3LI77 160 aa2.65□□□□□ -1.99
CHMP3-206ENST00000466032 A0A0D9SG42 100 aa2.63□□□□□ -1.99
CHMP3-206ENST00000466032 PRO2289Q9P1D8 64 aa2.62□□□□□ -1.99
CHMP3-206ENST00000466032 CRCT1Q9UGL9 99 aa2.62□□□□□ -1.99
CHMP3-206ENST00000466032 LCE3AQ5TA76 89 aa2.61□□□□□ -1.99
CHMP3-206ENST00000466032 KRTAP12-1P59990 96 aa2.6□□□□□ -1.99
CHMP3-206ENST00000466032 C10orf95Q9H7T3 257 aa2.59□□□□□ -1.99
CHMP3-206ENST00000466032 INE1O15225 51 aa2.58□□□□□ -2
CHMP3-206ENST00000466032 SPRR5A0A1B0GTR4 108 aa2.57□□□□□ -2
CHMP3-206ENST00000466032 KRTAP12-2P59991 146 aa2.57□□□□□ -2
CHMP3-206ENST00000466032 MT1BP07438 61 aa2.56□□□□□ -2
CHMP3-206ENST00000466032 USH2AO75445 5202 aa2.56□□□□□ -2
CHMP3-206ENST00000466032 KRTAP19-6Q3LI70 58 aa2.52□□□□□ -2.01
CHMP3-206ENST00000466032 KRTAP5-5Q701N2 237 aaPredicted RBP2.51□□□□□ -2.01
CHMP3-206ENST00000466032 SSPOA2VEC9 5147 aa2.51□□□□□ -2.01
CHMP3-206ENST00000466032 FCGBPQ9Y6R7 5405 aaPredicted RBP2.48□□□□□ -2.01
CHMP3-206ENST00000466032 TNP1P09430 55 aa2.48□□□□□ -2.01
CHMP3-206ENST00000466032 MT1XP80297 61 aa2.47□□□□□ -2.01
CHMP3-206ENST00000466032 LCE1CQ5T751 118 aa2.44□□□□□ -2.02
CHMP3-206ENST00000466032 LCE1BQ5T7P3 118 aa2.44□□□□□ -2.02
CHMP3-206ENST00000466032 MT3P25713 68 aa2.42□□□□□ -2.02
CHMP3-206ENST00000466032 MACF1Q9UPN3 7388 aaKnown RBP2.38□□□□□ -2.03
CHMP3-206ENST00000466032 SYNE2Q8WXH0 6885 aaKnown RBP2.37□□□□□ -2.03
CHMP3-206ENST00000466032 HMCN1Q96RW7 5635 aa2.35□□□□□ -2.03
CHMP3-206ENST00000466032 KRTAP8-1Q8IUC2 63 aa2.31□□□□□ -2.04
CHMP3-206ENST00000466032 KRTAP6-3Q3LI67 103 aa2.3□□□□□ -2.04
CHMP3-206ENST00000466032 MDN1Q9NU22 5596 aa2.26□□□□□ -2.05
CHMP3-206ENST00000466032 NEBP20929 6669 aa2.26□□□□□ -2.05
CHMP3-206ENST00000466032 KRTAP12-3P60328 96 aa2.25□□□□□ -2.05
CHMP3-206ENST00000466032 MUC12Q9UKN1 5478 aa2.24□□□□□ -2.05
CHMP3-206ENST00000466032 LCE1FQ5T754 118 aa2.23□□□□□ -2.05
CHMP3-206ENST00000466032 KMT2DO14686 5537 aa2.23□□□□□ -2.05
CHMP3-206ENST00000466032 KRTAP19-5Q3LI72 72 aa2.22□□□□□ -2.05
CHMP3-206ENST00000466032 KRTAP19-7Q3SYF9 63 aa2.2□□□□□ -2.06
CHMP3-206ENST00000466032 SPRR2FQ96RM1 72 aa2.2□□□□□ -2.06
CHMP3-206ENST00000466032 MT1EP04732 61 aa2.19□□□□□ -2.06
CHMP3-206ENST00000466032 MUC19Q7Z5P9 8384 aa2.17□□□□□ -2.06
CHMP3-206ENST00000466032 MT1GP13640 62 aa2.16□□□□□ -2.06
CHMP3-206ENST00000466032 KRTAP19-3Q7Z4W3 81 aa2.14□□□□□ -2.07
CHMP3-206ENST00000466032 MT1LQ93083 61 aa2.13□□□□□ -2.07
CHMP3-206ENST00000466032 SPRR2EP22531 72 aa2.11□□□□□ -2.07
CHMP3-206ENST00000466032 SPRR2BP35325 72 aa2.11□□□□□ -2.07
CHMP3-206ENST00000466032 SPRR2AP35326 72 aa2.11□□□□□ -2.07
CHMP3-206ENST00000466032 KRTAP20-1Q3LI63 56 aa2.11□□□□□ -2.07
CHMP3-206ENST00000466032 LCE3CQ5T5A8 94 aa2.1□□□□□ -2.07
CHMP3-206ENST00000466032 KRTAP2-3P0C7H8 128 aa2.08□□□□□ -2.08
CHMP3-206ENST00000466032 KRTAP2-4Q9BYR9 128 aa2.08□□□□□ -2.08
CHMP3-206ENST00000466032 MT1MQ8N339 61 aa2.06□□□□□ -2.08
CHMP3-206ENST00000466032 SPRR2DP22532 72 aa2.04□□□□□ -2.08
CHMP3-206ENST00000466032 KRTAP2-1Q9BYU5 128 aa2.01□□□□□ -2.09
CHMP3-206ENST00000466032 KRTAP5-7Q6L8G8 165 aa1.95□□□□□ -2.1
CHMP3-206ENST00000466032 DSTQ03001 7570 aaKnown RBP1.92□□□□□ -2.1
CHMP3-206ENST00000466032 LCE3EQ5T5B0 92 aa1.92□□□□□ -2.1
CHMP3-206ENST00000466032 GPR98Q8WXG9 6306 aa1.87□□□□□ -2.11
CHMP3-206ENST00000466032 MT1AP04731 61 aa1.84□□□□□ -2.11
CHMP3-206ENST00000466032 KRTAP12-4P60329 112 aa1.83□□□□□ -2.12
CHMP3-206ENST00000466032 KRTAP21-2Q3LI59 83 aa1.83□□□□□ -2.12
CHMP3-206ENST00000466032 KRTAP6-1Q3LI64 71 aa1.76□□□□□ -2.13
CHMP3-206ENST00000466032 SYNE1Q8NF91 8797 aaKnown RBP1.74□□□□□ -2.13
CHMP3-206ENST00000466032 MT4P47944 62 aa1.74□□□□□ -2.13
CHMP3-206ENST00000466032 AHNAK2Q8IVF2 5795 aa1.74□□□□□ -2.13
CHMP3-206ENST00000466032 KRTAP20-2Q3LI61 65 aa1.7□□□□□ -2.14
CHMP3-206ENST00000466032 KRTAP6-2Q3LI66 62 aa1.65□□□□□ -2.15
CHMP3-206ENST00000466032 KRTAP5-10Q6L8G5 202 aa1.65□□□□□ -2.15
CHMP3-206ENST00000466032 LCE3DQ9BYE3 92 aa1.61□□□□□ -2.15
CHMP3-206ENST00000466032 PRM1P04553 51 aa1.5□□□□□ -2.17
CHMP3-206ENST00000466032 AHNAKQ09666 5890 aaKnown RBP1.48□□□□□ -2.17
CHMP3-206ENST00000466032 MUC5BQ9HC84 5762 aaPredicted RBP1.48□□□□□ -2.17
CHMP3-206ENST00000466032 MUC5ACP98088 5654 aa1.45□□□□□ -2.18
CHMP3-206ENST00000466032 KRTAP21-1Q3LI58 79 aa1.11□□□□□ -2.23
CHMP3-206ENST00000466032 PHGR1C9JFL3 82 aa1.05□□□□□ -2.24
CHMP3-206ENST00000466032 MUC16Q8WXI7 14507 aa0.68□□□□□ -2.3
Retrieved 78 of 20,778 RNA–protein pairs in 210.7 ms