RNA–Protein interactions for RNA: ENST00000465842.1

CHKB-204, Transcript of choline kinase beta, humanhuman

TSL 2

Gene CHKB, Length 428 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-204ENST00000465842 PP632Q6XCG6 107 aa6.78□□□□□ -1.32
CHKB-204ENST00000465842 MT1LQ93083 61 aa6.73□□□□□ -1.33
CHKB-204ENST00000465842 A6NED7 52 aa6.67□□□□□ -1.34
CHKB-204ENST00000465842 MT1MQ8N339 61 aa6.67□□□□□ -1.34
CHKB-204ENST00000465842 KRTAP25-1Q3LHN0 102 aa6.66□□□□□ -1.34
CHKB-204ENST00000465842 KRTAP12-3P60328 96 aa6.63□□□□□ -1.35
CHKB-204ENST00000465842 PCP4P48539 62 aa6.62□□□□□ -1.35
CHKB-204ENST00000465842 DSTQ03001 7570 aaKnown RBP6.6□□□□□ -1.35
CHKB-204ENST00000465842 RPS28P62857 69 aaKnown RBP6.56□□□□□ -1.36
CHKB-204ENST00000465842 KRTAP4-3Q9BYR4 195 aa6.52□□□□□ -1.37
CHKB-204ENST00000465842 KRTAP4-9Q9BYQ8 210 aa6.49□□□□□ -1.37
CHKB-204ENST00000465842 CDC42SE1Q9NRR8 79 aa6.44□□□□□ -1.38
CHKB-204ENST00000465842 KRTAP4-7Q9BYR0 210 aa6.41□□□□□ -1.38
CHKB-204ENST00000465842 LCE4AQ5TA78 99 aa6.38□□□□□ -1.39
CHKB-204ENST00000465842 KRTAP23-1A1A580 65 aa6.37□□□□□ -1.39
CHKB-204ENST00000465842 LCE1DQ5T752 114 aa6.34□□□□□ -1.39
CHKB-204ENST00000465842 MT4P47944 62 aa6.33□□□□□ -1.4
CHKB-204ENST00000465842 ROMO1P60602 79 aa6.33□□□□□ -1.4
CHKB-204ENST00000465842 KRTAP15-1Q3LI76 137 aa6.24□□□□□ -1.41
CHKB-204ENST00000465842 KRTAP5-4Q6L8H1 288 aa6.24□□□□□ -1.41
CHKB-204ENST00000465842 KRTAP19-4Q3LI73 84 aa6.22□□□□□ -1.41
CHKB-204ENST00000465842 KRTAP4-6Q9BYQ5 205 aa6.11□□□□□ -1.43
CHKB-204ENST00000465842 LCE3CQ5T5A8 94 aa6.1□□□□□ -1.43
CHKB-204ENST00000465842 HMCN1Q96RW7 5635 aa6.1□□□□□ -1.43
CHKB-204ENST00000465842 GPR98Q8WXG9 6306 aa6.07□□□□□ -1.44
CHKB-204ENST00000465842 LOC100996750A0A140TA64 210 aa6.06□□□□□ -1.44
CHKB-204ENST00000465842 KRTAP5-5Q701N2 237 aaPredicted RBP6.06□□□□□ -1.44
CHKB-204ENST00000465842 KRTAP12-4P60329 112 aa5.96□□□□□ -1.46
CHKB-204ENST00000465842 KRTAP20-2Q3LI61 65 aa5.91□□□□□ -1.46
CHKB-204ENST00000465842 SPRR5A0A1B0GTR4 108 aa5.89□□□□□ -1.47
CHKB-204ENST00000465842 BRK1Q8WUW1 75 aa5.86□□□□□ -1.47
CHKB-204ENST00000465842 AHNAK2Q8IVF2 5795 aa5.85□□□□□ -1.47
CHKB-204ENST00000465842 KRTAP5-10Q6L8G5 202 aa5.79□□□□□ -1.48
CHKB-204ENST00000465842 MT1AP04731 61 aa5.73□□□□□ -1.49
CHKB-204ENST00000465842 SYNE1Q8NF91 8797 aaKnown RBP5.71□□□□□ -1.5
CHKB-204ENST00000465842 KRTAP9-6A8MVA2 160 aa5.71□□□□□ -1.5
CHKB-204ENST00000465842 KRTAP5-3Q6L8H2 238 aa5.71□□□□□ -1.5
CHKB-204ENST00000465842 KRTAP6-1Q3LI64 71 aa5.69□□□□□ -1.5
CHKB-204ENST00000465842 KRTAP5-7Q6L8G8 165 aa5.55□□□□□ -1.52
CHKB-204ENST00000465842 KRTAP9-4Q9BYQ2 154 aa5.52□□□□□ -1.53
CHKB-204ENST00000465842 PMAIP1Q13794 54 aa5.5□□□□□ -1.53
CHKB-204ENST00000465842 KRTAP5-2Q701N4 177 aa5.49□□□□□ -1.53
CHKB-204ENST00000465842 KRTAP6-2Q3LI66 62 aa5.42□□□□□ -1.54
CHKB-204ENST00000465842 KRTAP4-11Q9BYQ6 195 aa5.37□□□□□ -1.55
CHKB-204ENST00000465842 PRAC1Q96KF2 57 aa5.27□□□□□ -1.57
CHKB-204ENST00000465842 MT3P25713 68 aa5.26□□□□□ -1.57
CHKB-204ENST00000465842 KRTAP5-8O75690 187 aa5.16□□□□□ -1.58
CHKB-204ENST00000465842 PRO0628Q9UI54 55 aa5.14□□□□□ -1.59
CHKB-204ENST00000465842 OBSCNQ5VST9 7968 aa4.98□□□□□ -1.61
CHKB-204ENST00000465842 KRTAP9-9Q9BYP9 154 aa4.93□□□□□ -1.62
CHKB-204ENST00000465842 KTN1-AS1Q86SY8 53 aa4.92□□□□□ -1.62
CHKB-204ENST00000465842 KRTAP5-1Q6L8H4 278 aa4.89□□□□□ -1.63
CHKB-204ENST00000465842 SVIPQ8NHG7 77 aa4.8□□□□□ -1.64
CHKB-204ENST00000465842 MUC5ACP98088 5654 aa4.77□□□□□ -1.65
CHKB-204ENST00000465842 AHNAKQ09666 5890 aaKnown RBP4.76□□□□□ -1.65
CHKB-204ENST00000465842 MUC5BQ9HC84 5762 aaPredicted RBP4.76□□□□□ -1.65
CHKB-204ENST00000465842 LCE1EQ5T753 118 aa4.75□□□□□ -1.65
CHKB-204ENST00000465842 LCE1BQ5T7P3 118 aa4.54□□□□□ -1.68
CHKB-204ENST00000465842 LUZP6Q538Z0 58 aa4.49□□□□□ -1.69
CHKB-204ENST00000465842 KRTAP4-2Q9BYR5 136 aa4.47□□□□□ -1.69
CHKB-204ENST00000465842 LCE3DQ9BYE3 92 aa4.44□□□□□ -1.7
CHKB-204ENST00000465842 LCE1CQ5T751 118 aa4.41□□□□□ -1.7
CHKB-204ENST00000465842 LCE3EQ5T5B0 92 aa4.2□□□□□ -1.74
CHKB-204ENST00000465842 KRTAP4-12Q9BQ66 201 aa4.05□□□□□ -1.76
CHKB-204ENST00000465842 KRTAP5-6Q6L8G9 129 aaPredicted RBP4□□□□□ -1.77
CHKB-204ENST00000465842 KRTAP5-11Q6L8G4 156 aa3.98□□□□□ -1.77
CHKB-204ENST00000465842 LCE1FQ5T754 118 aa3.84□□□□□ -1.79
CHKB-204ENST00000465842 KRTAP21-2Q3LI59 83 aa3.72□□□□□ -1.81
CHKB-204ENST00000465842 NDUFAF8A1L188 74 aa3.66□□□□□ -1.82
CHKB-204ENST00000465842 KRTAP4-4Q9BYR3 166 aa3.44□□□□□ -1.86
CHKB-204ENST00000465842 PHGR1C9JFL3 82 aa3.43□□□□□ -1.86
CHKB-204ENST00000465842 PRM1P04553 51 aa3.24□□□□□ -1.89
CHKB-204ENST00000465842 MUC19Q7Z5P9 8384 aa3.07□□□□□ -1.92
CHKB-204ENST00000465842 A0A0A0MQY5 61 aa2.96□□□□□ -1.94
CHKB-204ENST00000465842 INE1O15225 51 aa2.94□□□□□ -1.94
CHKB-204ENST00000465842 H3BS24 57 aa2.72□□□□□ -1.97
CHKB-204ENST00000465842 KRTAP21-1Q3LI58 79 aa2.58□□□□□ -2
CHKB-204ENST00000465842 MUC16Q8WXI7 14507 aa2.2□□□□□ -2.06
Retrieved 78 of 20,778 RNA–protein pairs in 188.4 ms