RNA–Protein interactions for RNA: ENST00000465818.5

VPS8-218, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 4

Gene VPS8, Length 572 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-218ENST00000465818 KRTAP19-6Q3LI70 58 aa3.21□□□□□ -1.9
VPS8-218ENST00000465818 KRTAP12-1P59990 96 aa3.2□□□□□ -1.9
VPS8-218ENST00000465818 SPINT4Q6UDR6 99 aa3.19□□□□□ -1.9
VPS8-218ENST00000465818 FCGBPQ9Y6R7 5405 aaPredicted RBP3.18□□□□□ -1.9
VPS8-218ENST00000465818 MT1XP80297 61 aa3.17□□□□□ -1.9
VPS8-218ENST00000465818 PRO2289Q9P1D8 64 aa3.14□□□□□ -1.91
VPS8-218ENST00000465818 MACF1Q9UPN3 7388 aaKnown RBP3.12□□□□□ -1.91
VPS8-218ENST00000465818 CDC42SE1Q9NRR8 79 aa3.12□□□□□ -1.91
VPS8-218ENST00000465818 SPRR5A0A1B0GTR4 108 aa3.1□□□□□ -1.91
VPS8-218ENST00000465818 K7ERS5 55 aa3.1□□□□□ -1.91
VPS8-218ENST00000465818 KRTAP25-1Q3LHN0 102 aa3.06□□□□□ -1.92
VPS8-218ENST00000465818 BRK1Q8WUW1 75 aa3.06□□□□□ -1.92
VPS8-218ENST00000465818 KRTAP5-1Q6L8H4 278 aa3.04□□□□□ -1.92
VPS8-218ENST00000465818 C10orf95Q9H7T3 257 aa3.03□□□□□ -1.92
VPS8-218ENST00000465818 LCE3DQ9BYE3 92 aa3.02□□□□□ -1.93
VPS8-218ENST00000465818 SYNE2Q8WXH0 6885 aaKnown RBP3.01□□□□□ -1.93
VPS8-218ENST00000465818 KMT2DO14686 5537 aa2.99□□□□□ -1.93
VPS8-218ENST00000465818 TNP1P09430 55 aa2.96□□□□□ -1.94
VPS8-218ENST00000465818 ROMO1P60602 79 aa2.94□□□□□ -1.94
VPS8-218ENST00000465818 KRTAP4-4Q9BYR3 166 aa2.94□□□□□ -1.94
VPS8-218ENST00000465818 KRTAP5-4Q6L8H1 288 aa2.93□□□□□ -1.94
VPS8-218ENST00000465818 KRTAP5-9P26371 169 aa2.92□□□□□ -1.94
VPS8-218ENST00000465818 KRTAP8-1Q8IUC2 63 aa2.92□□□□□ -1.94
VPS8-218ENST00000465818 LCE3AQ5TA76 89 aa2.9□□□□□ -1.95
VPS8-218ENST00000465818 KRTAP6-3Q3LI67 103 aa2.88□□□□□ -1.95
VPS8-218ENST00000465818 SPRR2FQ96RM1 72 aa2.86□□□□□ -1.95
VPS8-218ENST00000465818 PMAIP1Q13794 54 aa2.85□□□□□ -1.95
VPS8-218ENST00000465818 MUC12Q9UKN1 5478 aa2.84□□□□□ -1.95
VPS8-218ENST00000465818 KRTAP19-5Q3LI72 72 aa2.82□□□□□ -1.96
VPS8-218ENST00000465818 KRTAP19-7Q3SYF9 63 aa2.82□□□□□ -1.96
VPS8-218ENST00000465818 NEBP20929 6669 aa2.81□□□□□ -1.96
VPS8-218ENST00000465818 MDN1Q9NU22 5596 aa2.81□□□□□ -1.96
VPS8-218ENST00000465818 MT1EP04732 61 aa2.79□□□□□ -1.96
VPS8-218ENST00000465818 KRTAP12-3P60328 96 aa2.77□□□□□ -1.97
VPS8-218ENST00000465818 SPRR2EP22531 72 aa2.76□□□□□ -1.97
VPS8-218ENST00000465818 SPRR2BP35325 72 aa2.76□□□□□ -1.97
VPS8-218ENST00000465818 SPRR2AP35326 72 aa2.76□□□□□ -1.97
VPS8-218ENST00000465818 PP632Q6XCG6 107 aa2.76□□□□□ -1.97
VPS8-218ENST00000465818 KTN1-AS1Q86SY8 53 aa2.71□□□□□ -1.98
VPS8-218ENST00000465818 MT1LQ93083 61 aa2.71□□□□□ -1.98
VPS8-218ENST00000465818 KRTAP19-3Q7Z4W3 81 aa2.7□□□□□ -1.98
VPS8-218ENST00000465818 OBSCNQ5VST9 7968 aa2.67□□□□□ -1.98
VPS8-218ENST00000465818 SPRR2DP22532 72 aa2.66□□□□□ -1.98
VPS8-218ENST00000465818 MT1GP13640 62 aa2.64□□□□□ -1.99
VPS8-218ENST00000465818 MT1MQ8N339 61 aa2.64□□□□□ -1.99
VPS8-218ENST00000465818 DSTQ03001 7570 aaKnown RBP2.61□□□□□ -1.99
VPS8-218ENST00000465818 KRTAP5-5Q701N2 237 aaPredicted RBP2.59□□□□□ -1.99
VPS8-218ENST00000465818 KRTAP4-3Q9BYR4 195 aa2.58□□□□□ -2
VPS8-218ENST00000465818 KRTAP20-1Q3LI63 56 aa2.57□□□□□ -2
VPS8-218ENST00000465818 KRTAP2-3P0C7H8 128 aa2.54□□□□□ -2
VPS8-218ENST00000465818 KRTAP2-4Q9BYR9 128 aa2.54□□□□□ -2
VPS8-218ENST00000465818 KRTAP5-2Q701N4 177 aa2.47□□□□□ -2.01
VPS8-218ENST00000465818 KRTAP2-1Q9BYU5 128 aa2.47□□□□□ -2.01
VPS8-218ENST00000465818 SYNE1Q8NF91 8797 aaKnown RBP2.33□□□□□ -2.04
VPS8-218ENST00000465818 MT4P47944 62 aa2.31□□□□□ -2.04
VPS8-218ENST00000465818 HMCN1Q96RW7 5635 aa2.3□□□□□ -2.04
VPS8-218ENST00000465818 MT1AP04731 61 aa2.3□□□□□ -2.04
VPS8-218ENST00000465818 LCE1CQ5T751 118 aa2.3□□□□□ -2.04
VPS8-218ENST00000465818 LCE1BQ5T7P3 118 aa2.3□□□□□ -2.04
VPS8-218ENST00000465818 KRTAP6-1Q3LI64 71 aa2.28□□□□□ -2.04
VPS8-218ENST00000465818 KRTAP12-4P60329 112 aa2.24□□□□□ -2.05
VPS8-218ENST00000465818 KRTAP20-2Q3LI61 65 aa2.22□□□□□ -2.05
VPS8-218ENST00000465818 AHNAK2Q8IVF2 5795 aa2.17□□□□□ -2.06
VPS8-218ENST00000465818 GPR98Q8WXG9 6306 aa2.14□□□□□ -2.07
VPS8-218ENST00000465818 KRTAP6-2Q3LI66 62 aa2.13□□□□□ -2.07
VPS8-218ENST00000465818 KRTAP5-8O75690 187 aa2.04□□□□□ -2.08
VPS8-218ENST00000465818 KRTAP5-7Q6L8G8 165 aa2.01□□□□□ -2.09
VPS8-218ENST00000465818 KRTAP5-10Q6L8G5 202 aa2□□□□□ -2.09
VPS8-218ENST00000465818 INE1O15225 51 aa1.9□□□□□ -2.11
VPS8-218ENST00000465818 MUC5ACP98088 5654 aa1.83□□□□□ -2.12
VPS8-218ENST00000465818 MUC19Q7Z5P9 8384 aa1.79□□□□□ -2.12
VPS8-218ENST00000465818 MUC5BQ9HC84 5762 aaPredicted RBP1.72□□□□□ -2.13
VPS8-218ENST00000465818 AHNAKQ09666 5890 aaKnown RBP1.7□□□□□ -2.14
VPS8-218ENST00000465818 KRTAP21-2Q3LI59 83 aa1.65□□□□□ -2.15
VPS8-218ENST00000465818 PRM1P04553 51 aa1.54□□□□□ -2.16
VPS8-218ENST00000465818 PHGR1C9JFL3 82 aa1.32□□□□□ -2.2
VPS8-218ENST00000465818 MUC16Q8WXI7 14507 aa0.95□□□□□ -2.26
VPS8-218ENST00000465818 KRTAP21-1Q3LI58 79 aa0.89□□□□□ -2.27
Retrieved 78 of 20,778 RNA–protein pairs in 46 ms