RNA–Protein interactions for RNA: ENST00000465552.1

CTNNB1-211, Transcript of catenin beta 1, humanhuman

TSL 2

Gene CTNNB1, Length 878 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNB1-211ENST00000465552 KRTAP20-1Q3LI63 56 aa3.87□□□□□ -1.79
CTNNB1-211ENST00000465552 SMIM26A0A096LP01 95 aa3.85□□□□□ -1.79
CTNNB1-211ENST00000465552 PRR15LQ9BU68 103 aa3.85□□□□□ -1.79
CTNNB1-211ENST00000465552 LINC01558Q9Y6Z2 57 aa3.83□□□□□ -1.8
CTNNB1-211ENST00000465552 MT3P25713 68 aa3.81□□□□□ -1.8
CTNNB1-211ENST00000465552 SPRR2DP22532 72 aa3.78□□□□□ -1.8
CTNNB1-211ENST00000465552 KRTAP2-3P0C7H8 128 aa3.76□□□□□ -1.81
CTNNB1-211ENST00000465552 KRTAP2-4Q9BYR9 128 aa3.76□□□□□ -1.81
CTNNB1-211ENST00000465552 UQCR11O14957 56 aa3.72□□□□□ -1.81
CTNNB1-211ENST00000465552 KRTAP19-7Q3SYF9 63 aa3.72□□□□□ -1.81
CTNNB1-211ENST00000465552 C10orf95Q9H7T3 257 aa3.71□□□□□ -1.82
CTNNB1-211ENST00000465552 KRTAP5-1Q6L8H4 278 aa3.7□□□□□ -1.82
CTNNB1-211ENST00000465552 PSPHP1O15172 72 aa3.69□□□□□ -1.82
CTNNB1-211ENST00000465552 MT1EP04732 61 aa3.69□□□□□ -1.82
CTNNB1-211ENST00000465552 TNP1P09430 55 aa3.67□□□□□ -1.82
CTNNB1-211ENST00000465552 KRTAP19-5Q3LI72 72 aa3.67□□□□□ -1.82
CTNNB1-211ENST00000465552 MIR22HGQ0VDD5 57 aa3.66□□□□□ -1.82
CTNNB1-211ENST00000465552 LCE3AQ5TA76 89 aa3.66□□□□□ -1.82
CTNNB1-211ENST00000465552 KRTAP2-1Q9BYU5 128 aa3.65□□□□□ -1.83
CTNNB1-211ENST00000465552 Q1T7F1 81 aa3.63□□□□□ -1.83
CTNNB1-211ENST00000465552 KRTAP19-3Q7Z4W3 81 aa3.63□□□□□ -1.83
CTNNB1-211ENST00000465552 V9GYY9 64 aa3.63□□□□□ -1.83
CTNNB1-211ENST00000465552 A0A0A0MQY5 61 aa3.59□□□□□ -1.83
CTNNB1-211ENST00000465552 KRTAP5-4Q6L8H1 288 aa3.59□□□□□ -1.83
CTNNB1-211ENST00000465552 DSTQ03001 7570 aaKnown RBP3.57□□□□□ -1.84
CTNNB1-211ENST00000465552 KRTAP4-4Q9BYR3 166 aa3.56□□□□□ -1.84
CTNNB1-211ENST00000465552 A6NED7 52 aa3.55□□□□□ -1.84
CTNNB1-211ENST00000465552 K7ERS5 55 aa3.55□□□□□ -1.84
CTNNB1-211ENST00000465552 MT1LQ93083 61 aa3.54□□□□□ -1.84
CTNNB1-211ENST00000465552 MT1GP13640 62 aa3.53□□□□□ -1.84
CTNNB1-211ENST00000465552 KRTAP9-6A8MVA2 160 aa3.51□□□□□ -1.85
CTNNB1-211ENST00000465552 PP632Q6XCG6 107 aa3.51□□□□□ -1.85
CTNNB1-211ENST00000465552 MT1MQ8N339 61 aa3.51□□□□□ -1.85
CTNNB1-211ENST00000465552 PRO0628Q9UI54 55 aa3.5□□□□□ -1.85
CTNNB1-211ENST00000465552 KRTAP12-3P60328 96 aa3.48□□□□□ -1.85
CTNNB1-211ENST00000465552 KRTAP25-1Q3LHN0 102 aa3.48□□□□□ -1.85
CTNNB1-211ENST00000465552 KRTAP4-3Q9BYR4 195 aa3.48□□□□□ -1.85
CTNNB1-211ENST00000465552 BRK1Q8WUW1 75 aa3.46□□□□□ -1.86
CTNNB1-211ENST00000465552 CDC42SE1Q9NRR8 79 aa3.4□□□□□ -1.87
CTNNB1-211ENST00000465552 LCE1FQ5T754 118 aa3.38□□□□□ -1.87
CTNNB1-211ENST00000465552 ROMO1P60602 79 aa3.34□□□□□ -1.87
CTNNB1-211ENST00000465552 MT4P47944 62 aa3.33□□□□□ -1.88
CTNNB1-211ENST00000465552 OBSCNQ5VST9 7968 aa3.3□□□□□ -1.88
CTNNB1-211ENST00000465552 PMAIP1Q13794 54 aa3.29□□□□□ -1.88
CTNNB1-211ENST00000465552 KTN1-AS1Q86SY8 53 aa3.22□□□□□ -1.89
CTNNB1-211ENST00000465552 HMCN1Q96RW7 5635 aa3.2□□□□□ -1.9
CTNNB1-211ENST00000465552 LCE3CQ5T5A8 94 aa3.2□□□□□ -1.9
CTNNB1-211ENST00000465552 KRTAP5-5Q701N2 237 aaPredicted RBP3.18□□□□□ -1.9
CTNNB1-211ENST00000465552 GPR98Q8WXG9 6306 aa3.14□□□□□ -1.91
CTNNB1-211ENST00000465552 SYNE1Q8NF91 8797 aaKnown RBP3.12□□□□□ -1.91
CTNNB1-211ENST00000465552 AHNAK2Q8IVF2 5795 aa3.1□□□□□ -1.91
CTNNB1-211ENST00000465552 KRTAP20-2Q3LI61 65 aa3.1□□□□□ -1.91
CTNNB1-211ENST00000465552 KRTAP12-4P60329 112 aa3.06□□□□□ -1.92
CTNNB1-211ENST00000465552 PRAC1Q96KF2 57 aa3.05□□□□□ -1.92
CTNNB1-211ENST00000465552 SPRR5A0A1B0GTR4 108 aa3.04□□□□□ -1.92
CTNNB1-211ENST00000465552 MT1AP04731 61 aa3.01□□□□□ -1.93
CTNNB1-211ENST00000465552 KRTAP6-1Q3LI64 71 aa3.01□□□□□ -1.93
CTNNB1-211ENST00000465552 KRTAP5-10Q6L8G5 202 aa3□□□□□ -1.93
CTNNB1-211ENST00000465552 KRTAP5-2Q701N4 177 aa2.99□□□□□ -1.93
CTNNB1-211ENST00000465552 LCE3EQ5T5B0 92 aa2.89□□□□□ -1.95
CTNNB1-211ENST00000465552 KRTAP5-7Q6L8G8 165 aa2.86□□□□□ -1.95
CTNNB1-211ENST00000465552 KRTAP6-2Q3LI66 62 aa2.85□□□□□ -1.95
CTNNB1-211ENST00000465552 NDUFAF8A1L188 74 aa2.72□□□□□ -1.97
CTNNB1-211ENST00000465552 KRTAP5-8O75690 187 aa2.7□□□□□ -1.98
CTNNB1-211ENST00000465552 LCE1CQ5T751 118 aa2.63□□□□□ -1.99
CTNNB1-211ENST00000465552 LCE1BQ5T7P3 118 aa2.63□□□□□ -1.99
CTNNB1-211ENST00000465552 LUZP6Q538Z0 58 aa2.53□□□□□ -2
CTNNB1-211ENST00000465552 MUC5ACP98088 5654 aa2.49□□□□□ -2.01
CTNNB1-211ENST00000465552 MUC5BQ9HC84 5762 aaPredicted RBP2.47□□□□□ -2.01
CTNNB1-211ENST00000465552 AHNAKQ09666 5890 aaKnown RBP2.45□□□□□ -2.02
CTNNB1-211ENST00000465552 LCE3DQ9BYE3 92 aa2.33□□□□□ -2.04
CTNNB1-211ENST00000465552 MUC19Q7Z5P9 8384 aa2.24□□□□□ -2.05
CTNNB1-211ENST00000465552 INE1O15225 51 aa2.12□□□□□ -2.07
CTNNB1-211ENST00000465552 KRTAP21-2Q3LI59 83 aa1.96□□□□□ -2.1
CTNNB1-211ENST00000465552 PHGR1C9JFL3 82 aa1.79□□□□□ -2.12
CTNNB1-211ENST00000465552 PRM1P04553 51 aa1.75□□□□□ -2.13
CTNNB1-211ENST00000465552 KRTAP21-1Q3LI58 79 aa1.3□□□□□ -2.2
CTNNB1-211ENST00000465552 MUC16Q8WXI7 14507 aa1.19□□□□□ -2.22
Retrieved 78 of 20,778 RNA–protein pairs in 112.6 ms