RNA–Protein interactions for RNA: ENST00000465399.5

ATG4B-214, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2

Gene ATG4B, Length 581 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-214ENST00000465399 SMIM26A0A096LP01 95 aa5□□□□□ -1.61
ATG4B-214ENST00000465399 ATP5EP56381 51 aaPredicted RBP5□□□□□ -1.61
ATG4B-214ENST00000465399 V9GYY9 64 aa4.98□□□□□ -1.61
ATG4B-214ENST00000465399 KRTAP5-4Q6L8H1 288 aa4.97□□□□□ -1.61
ATG4B-214ENST00000465399 LINC01558Q9Y6Z2 57 aa4.96□□□□□ -1.62
ATG4B-214ENST00000465399 AHNAK2Q8IVF2 5795 aa4.95□□□□□ -1.62
ATG4B-214ENST00000465399 KRTAP5-10Q6L8G5 202 aa4.95□□□□□ -1.62
ATG4B-214ENST00000465399 KRTAP4-3Q9BYR4 195 aa4.94□□□□□ -1.62
ATG4B-214ENST00000465399 C10orf95Q9H7T3 257 aa4.93□□□□□ -1.62
ATG4B-214ENST00000465399 TMEM258P61165 79 aa4.92□□□□□ -1.62
ATG4B-214ENST00000465399 KRTAP4-6Q9BYQ5 205 aa4.92□□□□□ -1.62
ATG4B-214ENST00000465399 PRR15LQ9BU68 103 aa4.91□□□□□ -1.62
ATG4B-214ENST00000465399 LCE3AQ5TA76 89 aa4.9□□□□□ -1.63
ATG4B-214ENST00000465399 KRTAP23-1A1A580 65 aa4.88□□□□□ -1.63
ATG4B-214ENST00000465399 TNP1P09430 55 aa4.87□□□□□ -1.63
ATG4B-214ENST00000465399 KRTAP5-7Q6L8G8 165 aa4.79□□□□□ -1.64
ATG4B-214ENST00000465399 UQCR11O14957 56 aa4.78□□□□□ -1.64
ATG4B-214ENST00000465399 KRTAP5-3Q6L8H2 238 aa4.78□□□□□ -1.64
ATG4B-214ENST00000465399 KRTAP4-7Q9BYR0 210 aa4.75□□□□□ -1.65
ATG4B-214ENST00000465399 KRTAP12-3P60328 96 aa4.72□□□□□ -1.65
ATG4B-214ENST00000465399 KRTAP20-2Q3LI61 65 aa4.72□□□□□ -1.65
ATG4B-214ENST00000465399 MIR22HGQ0VDD5 57 aa4.71□□□□□ -1.66
ATG4B-214ENST00000465399 PSPHP1O15172 72 aa4.69□□□□□ -1.66
ATG4B-214ENST00000465399 SPRR5A0A1B0GTR4 108 aa4.68□□□□□ -1.66
ATG4B-214ENST00000465399 KRTAP5-5Q701N2 237 aaPredicted RBP4.67□□□□□ -1.66
ATG4B-214ENST00000465399 Q1T7F1 81 aa4.66□□□□□ -1.66
ATG4B-214ENST00000465399 KRTAP12-4P60329 112 aa4.64□□□□□ -1.67
ATG4B-214ENST00000465399 PRO0628Q9UI54 55 aa4.56□□□□□ -1.68
ATG4B-214ENST00000465399 KRTAP25-1Q3LHN0 102 aa4.55□□□□□ -1.68
ATG4B-214ENST00000465399 LOC100996750A0A140TA64 210 aa4.53□□□□□ -1.68
ATG4B-214ENST00000465399 K7ERS5 55 aa4.52□□□□□ -1.69
ATG4B-214ENST00000465399 A6NED7 52 aa4.48□□□□□ -1.69
ATG4B-214ENST00000465399 RPS28P62857 69 aaKnown RBP4.46□□□□□ -1.7
ATG4B-214ENST00000465399 PRAC1Q96KF2 57 aa4.45□□□□□ -1.7
ATG4B-214ENST00000465399 KRTAP19-4Q3LI73 84 aa4.44□□□□□ -1.7
ATG4B-214ENST00000465399 SYNE1Q8NF91 8797 aaKnown RBP4.39□□□□□ -1.71
ATG4B-214ENST00000465399 PMAIP1Q13794 54 aa4.39□□□□□ -1.71
ATG4B-214ENST00000465399 KRTAP4-11Q9BYQ6 195 aa4.37□□□□□ -1.71
ATG4B-214ENST00000465399 CDC42SE1Q9NRR8 79 aa4.33□□□□□ -1.72
ATG4B-214ENST00000465399 KRTAP15-1Q3LI76 137 aa4.32□□□□□ -1.72
ATG4B-214ENST00000465399 LCE3CQ5T5A8 94 aa4.32□□□□□ -1.72
ATG4B-214ENST00000465399 ROMO1P60602 79 aa4.31□□□□□ -1.72
ATG4B-214ENST00000465399 KRTAP5-2Q701N4 177 aa4.31□□□□□ -1.72
ATG4B-214ENST00000465399 MT1AP04731 61 aa4.28□□□□□ -1.72
ATG4B-214ENST00000465399 KRTAP6-1Q3LI64 71 aa4.26□□□□□ -1.73
ATG4B-214ENST00000465399 KRTAP5-8O75690 187 aa4.23□□□□□ -1.73
ATG4B-214ENST00000465399 KRTAP9-4Q9BYQ2 154 aa4.15□□□□□ -1.75
ATG4B-214ENST00000465399 MUC5ACP98088 5654 aa4.14□□□□□ -1.75
ATG4B-214ENST00000465399 KRTAP6-2Q3LI66 62 aa4.13□□□□□ -1.75
ATG4B-214ENST00000465399 MUC5BQ9HC84 5762 aaPredicted RBP4.12□□□□□ -1.75
ATG4B-214ENST00000465399 AHNAKQ09666 5890 aaKnown RBP4.1□□□□□ -1.75
ATG4B-214ENST00000465399 KRTAP9-6A8MVA2 160 aa4.09□□□□□ -1.75
ATG4B-214ENST00000465399 KRTAP9-9Q9BYP9 154 aa4.07□□□□□ -1.76
ATG4B-214ENST00000465399 KTN1-AS1Q86SY8 53 aa4.06□□□□□ -1.76
ATG4B-214ENST00000465399 OBSCNQ5VST9 7968 aa4.03□□□□□ -1.76
ATG4B-214ENST00000465399 LUZP6Q538Z0 58 aa3.97□□□□□ -1.77
ATG4B-214ENST00000465399 MT3P25713 68 aa3.94□□□□□ -1.78
ATG4B-214ENST00000465399 BRK1Q8WUW1 75 aa3.94□□□□□ -1.78
ATG4B-214ENST00000465399 KRTAP5-1Q6L8H4 278 aa3.91□□□□□ -1.78
ATG4B-214ENST00000465399 NDUFAF8A1L188 74 aa3.83□□□□□ -1.8
ATG4B-214ENST00000465399 LCE1EQ5T753 118 aa3.66□□□□□ -1.82
ATG4B-214ENST00000465399 LCE1BQ5T7P3 118 aa3.48□□□□□ -1.85
ATG4B-214ENST00000465399 KRTAP4-2Q9BYR5 136 aa3.47□□□□□ -1.85
ATG4B-214ENST00000465399 LCE1CQ5T751 118 aa3.4□□□□□ -1.87
ATG4B-214ENST00000465399 KRTAP4-12Q9BQ66 201 aa3.37□□□□□ -1.87
ATG4B-214ENST00000465399 KRTAP5-11Q6L8G4 156 aa3.11□□□□□ -1.91
ATG4B-214ENST00000465399 LCE1FQ5T754 118 aa3.09□□□□□ -1.91
ATG4B-214ENST00000465399 LCE3DQ9BYE3 92 aa3.07□□□□□ -1.92
ATG4B-214ENST00000465399 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.06□□□□□ -1.92
ATG4B-214ENST00000465399 INE1O15225 51 aa2.93□□□□□ -1.94
ATG4B-214ENST00000465399 PHGR1C9JFL3 82 aa2.91□□□□□ -1.94
ATG4B-214ENST00000465399 LCE3EQ5T5B0 92 aa2.89□□□□□ -1.95
ATG4B-214ENST00000465399 KRTAP21-2Q3LI59 83 aa2.8□□□□□ -1.96
ATG4B-214ENST00000465399 KRTAP4-4Q9BYR3 166 aa2.61□□□□□ -1.99
ATG4B-214ENST00000465399 MUC19Q7Z5P9 8384 aa2.48□□□□□ -2.01
ATG4B-214ENST00000465399 PRM1P04553 51 aa2.23□□□□□ -2.05
ATG4B-214ENST00000465399 KRTAP21-1Q3LI58 79 aa2.21□□□□□ -2.06
ATG4B-214ENST00000465399 MUC16Q8WXI7 14507 aa1.72□□□□□ -2.13
Retrieved 78 of 20,778 RNA–protein pairs in 12.2 ms