RNA–Protein interactions for RNA: ENST00000465209.1

COL11A1-207, Transcript of collagen type XI alpha 1 chain, humanhuman

TSL 2

Gene COL11A1, Length 297 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1-207ENST00000465209 KRTAP5-5Q701N2 237 aaPredicted RBP3.68□□□□□ -1.82
COL11A1-207ENST00000465209 COA5Q86WW8 74 aa3.67□□□□□ -1.82
COL11A1-207ENST00000465209 SVIPQ8NHG7 77 aa3.67□□□□□ -1.82
COL11A1-207ENST00000465209 A0A1B0GU33 70 aa3.65□□□□□ -1.83
COL11A1-207ENST00000465209 SERP1Q9Y6X1 66 aa3.64□□□□□ -1.83
COL11A1-207ENST00000465209 SPRR5A0A1B0GTR4 108 aa3.63□□□□□ -1.83
COL11A1-207ENST00000465209 SEC61GP60059 68 aa3.62□□□□□ -1.83
COL11A1-207ENST00000465209 TNP1P09430 55 aa3.59□□□□□ -1.83
COL11A1-207ENST00000465209 SERP2Q8N6R1 65 aa3.57□□□□□ -1.84
COL11A1-207ENST00000465209 A8MU10 97 aa3.56□□□□□ -1.84
COL11A1-207ENST00000465209 SYNE1Q8NF91 8797 aaKnown RBP3.56□□□□□ -1.84
COL11A1-207ENST00000465209 KRTAP12-3P60328 96 aa3.55□□□□□ -1.84
COL11A1-207ENST00000465209 KRTAP12-4P60329 112 aa3.53□□□□□ -1.84
COL11A1-207ENST00000465209 KRTAP4-11Q9BYQ6 195 aa3.53□□□□□ -1.84
COL11A1-207ENST00000465209 SMIM26A0A096LP01 95 aa3.52□□□□□ -1.85
COL11A1-207ENST00000465209 K7ERU9 68 aa3.51□□□□□ -1.85
COL11A1-207ENST00000465209 A0A1B0GU69 56 aa3.45□□□□□ -1.86
COL11A1-207ENST00000465209 H7BZZ5 65 aa3.44□□□□□ -1.86
COL11A1-207ENST00000465209 KRTAP5-2Q701N4 177 aa3.41□□□□□ -1.86
COL11A1-207ENST00000465209 COX7CP15954 63 aa3.39□□□□□ -1.87
COL11A1-207ENST00000465209 MUC5BQ9HC84 5762 aaPredicted RBP3.35□□□□□ -1.87
COL11A1-207ENST00000465209 KRTAP5-8O75690 187 aa3.35□□□□□ -1.87
COL11A1-207ENST00000465209 KRTAP19-4Q3LI73 84 aa3.32□□□□□ -1.88
COL11A1-207ENST00000465209 MUC5ACP98088 5654 aa3.3□□□□□ -1.88
COL11A1-207ENST00000465209 KRTAP6-1Q3LI64 71 aa3.3□□□□□ -1.88
COL11A1-207ENST00000465209 MT1AP04731 61 aa3.29□□□□□ -1.88
COL11A1-207ENST00000465209 AHNAKQ09666 5890 aaKnown RBP3.28□□□□□ -1.88
COL11A1-207ENST00000465209 KRTAP25-1Q3LHN0 102 aa3.27□□□□□ -1.89
COL11A1-207ENST00000465209 LCE3CQ5T5A8 94 aa3.25□□□□□ -1.89
COL11A1-207ENST00000465209 KRTAP15-1Q3LI76 137 aa3.23□□□□□ -1.89
COL11A1-207ENST00000465209 PRR15LQ9BU68 103 aa3.23□□□□□ -1.89
COL11A1-207ENST00000465209 PCP4P48539 62 aa3.22□□□□□ -1.89
COL11A1-207ENST00000465209 LINC01558Q9Y6Z2 57 aa3.22□□□□□ -1.89
COL11A1-207ENST00000465209 OBSCNQ5VST9 7968 aa3.2□□□□□ -1.9
COL11A1-207ENST00000465209 KRTAP6-2Q3LI66 62 aa3.18□□□□□ -1.9
COL11A1-207ENST00000465209 KRTAP23-1A1A580 65 aa3.16□□□□□ -1.9
COL11A1-207ENST00000465209 UQCR11O14957 56 aa3.16□□□□□ -1.9
COL11A1-207ENST00000465209 KRTAP9-6A8MVA2 160 aa3.15□□□□□ -1.91
COL11A1-207ENST00000465209 ATP5EP56381 51 aaPredicted RBP3.1□□□□□ -1.91
COL11A1-207ENST00000465209 KRTAP5-1Q6L8H4 278 aa3.1□□□□□ -1.91
COL11A1-207ENST00000465209 CCDC179H3BU77 68 aa3.09□□□□□ -1.91
COL11A1-207ENST00000465209 H3BS24 57 aa3.08□□□□□ -1.92
COL11A1-207ENST00000465209 ANAPC13Q9BS18 74 aa3.07□□□□□ -1.92
COL11A1-207ENST00000465209 MIR22HGQ0VDD5 57 aa3.06□□□□□ -1.92
COL11A1-207ENST00000465209 K7ERS5 55 aa2.99□□□□□ -1.93
COL11A1-207ENST00000465209 MT3P25713 68 aa2.99□□□□□ -1.93
COL11A1-207ENST00000465209 TMEM258P61165 79 aa2.93□□□□□ -1.94
COL11A1-207ENST00000465209 Q1T7F1 81 aa2.86□□□□□ -1.95
COL11A1-207ENST00000465209 PSPHP1O15172 72 aa2.85□□□□□ -1.95
COL11A1-207ENST00000465209 RPS28P62857 69 aaKnown RBP2.85□□□□□ -1.95
COL11A1-207ENST00000465209 CDC42SE1Q9NRR8 79 aa2.84□□□□□ -1.95
COL11A1-207ENST00000465209 LCE1EQ5T753 118 aa2.83□□□□□ -1.96
COL11A1-207ENST00000465209 ROMO1P60602 79 aa2.8□□□□□ -1.96
COL11A1-207ENST00000465209 V9GYY9 64 aa2.78□□□□□ -1.96
COL11A1-207ENST00000465209 PRO0628Q9UI54 55 aa2.72□□□□□ -1.97
COL11A1-207ENST00000465209 A6NED7 52 aa2.71□□□□□ -1.98
COL11A1-207ENST00000465209 LCE1CQ5T751 118 aa2.64□□□□□ -1.99
COL11A1-207ENST00000465209 LCE1BQ5T7P3 118 aa2.64□□□□□ -1.99
COL11A1-207ENST00000465209 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.64□□□□□ -1.99
COL11A1-207ENST00000465209 PMAIP1Q13794 54 aa2.57□□□□□ -2
COL11A1-207ENST00000465209 KRTAP5-11Q6L8G4 156 aa2.46□□□□□ -2.02
COL11A1-207ENST00000465209 KTN1-AS1Q86SY8 53 aa2.44□□□□□ -2.02
COL11A1-207ENST00000465209 BRK1Q8WUW1 75 aa2.43□□□□□ -2.02
COL11A1-207ENST00000465209 A0A0A0MQY5 61 aa2.4□□□□□ -2.03
COL11A1-207ENST00000465209 LCE1FQ5T754 118 aa2.39□□□□□ -2.03
COL11A1-207ENST00000465209 LCE3DQ9BYE3 92 aa2.27□□□□□ -2.05
COL11A1-207ENST00000465209 PHGR1C9JFL3 82 aa2.26□□□□□ -2.05
COL11A1-207ENST00000465209 KRTAP21-2Q3LI59 83 aa2.2□□□□□ -2.06
COL11A1-207ENST00000465209 KRTAP4-4Q9BYR3 166 aa2.19□□□□□ -2.06
COL11A1-207ENST00000465209 LCE3EQ5T5B0 92 aa2.08□□□□□ -2.08
COL11A1-207ENST00000465209 LUZP6Q538Z0 58 aa2.05□□□□□ -2.08
COL11A1-207ENST00000465209 PRAC1Q96KF2 57 aa2.04□□□□□ -2.08
COL11A1-207ENST00000465209 MUC19Q7Z5P9 8384 aa1.98□□□□□ -2.09
COL11A1-207ENST00000465209 NDUFAF8A1L188 74 aa1.91□□□□□ -2.1
COL11A1-207ENST00000465209 INE1O15225 51 aa1.75□□□□□ -2.13
COL11A1-207ENST00000465209 KRTAP21-1Q3LI58 79 aa1.72□□□□□ -2.13
COL11A1-207ENST00000465209 PRM1P04553 51 aa1.43□□□□□ -2.18
COL11A1-207ENST00000465209 MUC16Q8WXI7 14507 aa1.42□□□□□ -2.18
Retrieved 78 of 20,778 RNA–protein pairs in 82 ms