RNA–Protein interactions for RNA: ENST00000465158.5

RBM39-225, Transcript of RNA binding motif protein 39, humanhuman

TSL 2

Gene RBM39, Length 825 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-225ENST00000465158 KRTAP13-4Q3LI77 160 aa2.96□□□□□ -1.94
RBM39-225ENST00000465158 KTN1-AS1Q86SY8 53 aa2.95□□□□□ -1.94
RBM39-225ENST00000465158 KRTAP19-8Q3LI54 63 aa2.94□□□□□ -1.94
RBM39-225ENST00000465158 SPINT4Q6UDR6 99 aa2.93□□□□□ -1.94
RBM39-225ENST00000465158 KRTAP5-2Q701N4 177 aa2.92□□□□□ -1.94
RBM39-225ENST00000465158 KRTAP12-1P59990 96 aa2.91□□□□□ -1.94
RBM39-225ENST00000465158 PRO2289Q9P1D8 64 aa2.89□□□□□ -1.95
RBM39-225ENST00000465158 KRTAP12-2P59991 146 aa2.87□□□□□ -1.95
RBM39-225ENST00000465158 LCE3AQ5TA76 89 aa2.85□□□□□ -1.95
RBM39-225ENST00000465158 MT1BP07438 61 aa2.84□□□□□ -1.95
RBM39-225ENST00000465158 ROMO1P60602 79 aa2.82□□□□□ -1.96
RBM39-225ENST00000465158 TNP1P09430 55 aa2.78□□□□□ -1.96
RBM39-225ENST00000465158 KRTAP25-1Q3LHN0 102 aa2.78□□□□□ -1.96
RBM39-225ENST00000465158 KRTAP19-6Q3LI70 58 aa2.77□□□□□ -1.97
RBM39-225ENST00000465158 MT1XP80297 61 aa2.74□□□□□ -1.97
RBM39-225ENST00000465158 LCE3EQ5T5B0 92 aa2.74□□□□□ -1.97
RBM39-225ENST00000465158 C10orf95Q9H7T3 257 aa2.73□□□□□ -1.97
RBM39-225ENST00000465158 PP632Q6XCG6 107 aa2.72□□□□□ -1.97
RBM39-225ENST00000465158 USH2AO75445 5202 aa2.72□□□□□ -1.97
RBM39-225ENST00000465158 CRCT1Q9UGL9 99 aa2.7□□□□□ -1.98
RBM39-225ENST00000465158 SSPOA2VEC9 5147 aa2.68□□□□□ -1.98
RBM39-225ENST00000465158 FSIP2Q5CZC0 6907 aa2.66□□□□□ -1.98
RBM39-225ENST00000465158 LUZP6Q538Z0 58 aa2.63□□□□□ -1.99
RBM39-225ENST00000465158 KRTAP5-5Q701N2 237 aaPredicted RBP2.61□□□□□ -1.99
RBM39-225ENST00000465158 FCGBPQ9Y6R7 5405 aaPredicted RBP2.58□□□□□ -2
RBM39-225ENST00000465158 KRTAP8-1Q8IUC2 63 aa2.56□□□□□ -2
RBM39-225ENST00000465158 KRTAP12-3P60328 96 aa2.51□□□□□ -2.01
RBM39-225ENST00000465158 LCE1CQ5T751 118 aa2.51□□□□□ -2.01
RBM39-225ENST00000465158 LCE1BQ5T7P3 118 aa2.51□□□□□ -2.01
RBM39-225ENST00000465158 KRTAP6-3Q3LI67 103 aa2.46□□□□□ -2.02
RBM39-225ENST00000465158 KRTAP19-5Q3LI72 72 aa2.46□□□□□ -2.02
RBM39-225ENST00000465158 MACF1Q9UPN3 7388 aaKnown RBP2.45□□□□□ -2.02
RBM39-225ENST00000465158 KRTAP5-8O75690 187 aa2.45□□□□□ -2.02
RBM39-225ENST00000465158 KRTAP19-7Q3SYF9 63 aa2.44□□□□□ -2.02
RBM39-225ENST00000465158 SPRR2FQ96RM1 72 aa2.43□□□□□ -2.02
RBM39-225ENST00000465158 MT1EP04732 61 aa2.42□□□□□ -2.02
RBM39-225ENST00000465158 KMT2DO14686 5537 aa2.41□□□□□ -2.02
RBM39-225ENST00000465158 MT1GP13640 62 aa2.39□□□□□ -2.03
RBM39-225ENST00000465158 KRTAP19-3Q7Z4W3 81 aa2.37□□□□□ -2.03
RBM39-225ENST00000465158 MT1LQ93083 61 aa2.36□□□□□ -2.03
RBM39-225ENST00000465158 SYNE2Q8WXH0 6885 aaKnown RBP2.36□□□□□ -2.03
RBM39-225ENST00000465158 SPRR2EP22531 72 aa2.33□□□□□ -2.04
RBM39-225ENST00000465158 SPRR2BP35325 72 aa2.33□□□□□ -2.04
RBM39-225ENST00000465158 SPRR2AP35326 72 aa2.33□□□□□ -2.04
RBM39-225ENST00000465158 MT1MQ8N339 61 aa2.29□□□□□ -2.04
RBM39-225ENST00000465158 MUC12Q9UKN1 5478 aa2.28□□□□□ -2.04
RBM39-225ENST00000465158 SPRR5A0A1B0GTR4 108 aa2.27□□□□□ -2.05
RBM39-225ENST00000465158 SPRR2DP22532 72 aa2.26□□□□□ -2.05
RBM39-225ENST00000465158 MDN1Q9NU22 5596 aa2.23□□□□□ -2.05
RBM39-225ENST00000465158 LCE3DQ9BYE3 92 aa2.19□□□□□ -2.06
RBM39-225ENST00000465158 KRTAP2-3P0C7H8 128 aa2.18□□□□□ -2.06
RBM39-225ENST00000465158 KRTAP2-4Q9BYR9 128 aa2.18□□□□□ -2.06
RBM39-225ENST00000465158 NEBP20929 6669 aa2.18□□□□□ -2.06
RBM39-225ENST00000465158 KRTAP20-1Q3LI63 56 aa2.13□□□□□ -2.07
RBM39-225ENST00000465158 KRTAP2-1Q9BYU5 128 aa2.13□□□□□ -2.07
RBM39-225ENST00000465158 DSTQ03001 7570 aaKnown RBP2.11□□□□□ -2.07
RBM39-225ENST00000465158 MUC19Q7Z5P9 8384 aa2.04□□□□□ -2.08
RBM39-225ENST00000465158 MT1AP04731 61 aa2.04□□□□□ -2.08
RBM39-225ENST00000465158 KRTAP12-4P60329 112 aa2.03□□□□□ -2.08
RBM39-225ENST00000465158 KRTAP5-7Q6L8G8 165 aa2.03□□□□□ -2.08
RBM39-225ENST00000465158 KRTAP6-1Q3LI64 71 aa1.96□□□□□ -2.1
RBM39-225ENST00000465158 INE1O15225 51 aa1.95□□□□□ -2.1
RBM39-225ENST00000465158 MT4P47944 62 aa1.91□□□□□ -2.1
RBM39-225ENST00000465158 KRTAP20-2Q3LI61 65 aa1.88□□□□□ -2.11
RBM39-225ENST00000465158 SYNE1Q8NF91 8797 aaKnown RBP1.85□□□□□ -2.11
RBM39-225ENST00000465158 HMCN1Q96RW7 5635 aa1.84□□□□□ -2.11
RBM39-225ENST00000465158 KRTAP6-2Q3LI66 62 aa1.84□□□□□ -2.11
RBM39-225ENST00000465158 KRTAP21-2Q3LI59 83 aa1.81□□□□□ -2.12
RBM39-225ENST00000465158 AHNAK2Q8IVF2 5795 aa1.65□□□□□ -2.15
RBM39-225ENST00000465158 KRTAP5-10Q6L8G5 202 aa1.62□□□□□ -2.15
RBM39-225ENST00000465158 GPR98Q8WXG9 6306 aa1.51□□□□□ -2.17
RBM39-225ENST00000465158 MUC5ACP98088 5654 aa1.45□□□□□ -2.18
RBM39-225ENST00000465158 PRM1P04553 51 aa1.44□□□□□ -2.18
RBM39-225ENST00000465158 MUC5BQ9HC84 5762 aaPredicted RBP1.36□□□□□ -2.19
RBM39-225ENST00000465158 AHNAKQ09666 5890 aaKnown RBP1.27□□□□□ -2.21
RBM39-225ENST00000465158 PHGR1C9JFL3 82 aa1.16□□□□□ -2.22
RBM39-225ENST00000465158 KRTAP21-1Q3LI58 79 aa0.87□□□□□ -2.27
RBM39-225ENST00000465158 MUC16Q8WXI7 14507 aa0.84□□□□□ -2.27
Retrieved 78 of 20,778 RNA–protein pairs in 7.1 ms