RNA–Protein interactions for RNA: ENST00000464940.1

KPNA1-202, Transcript of karyopherin subunit alpha 1, humanhuman

TSL 4

Gene KPNA1, Length 582 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KPNA1-202ENST00000464940 MT1HP80294 61 aa2.83□□□□□ -1.96
KPNA1-202ENST00000464940 KRTAP19-2Q3LHN2 52 aa2.83□□□□□ -1.96
KPNA1-202ENST00000464940 FLGP20930 4061 aaPredicted RBP2.82□□□□□ -1.96
KPNA1-202ENST00000464940 C9orf92A6NGG3 77 aa2.81□□□□□ -1.96
KPNA1-202ENST00000464940 H0YAA0 97 aa2.8□□□□□ -1.96
KPNA1-202ENST00000464940 PP632Q6XCG6 107 aa2.79□□□□□ -1.96
KPNA1-202ENST00000464940 RPL37P61927 97 aaKnown RBP2.78□□□□□ -1.96
KPNA1-202ENST00000464940 MUC19Q7Z5P9 8384 aa2.77□□□□□ -1.97
KPNA1-202ENST00000464940 M0R2T5 61 aa2.77□□□□□ -1.97
KPNA1-202ENST00000464940 ROMO1P60602 79 aa2.77□□□□□ -1.97
KPNA1-202ENST00000464940 COX6B2Q6YFQ2 88 aa2.77□□□□□ -1.97
KPNA1-202ENST00000464940 H1FX-AS1Q4G0G2 97 aa2.75□□□□□ -1.97
KPNA1-202ENST00000464940 SSPOA2VEC9 5147 aa2.69□□□□□ -1.98
KPNA1-202ENST00000464940 USH2AO75445 5202 aa2.69□□□□□ -1.98
KPNA1-202ENST00000464940 KRTAP5-7Q6L8G8 165 aa2.65□□□□□ -1.99
KPNA1-202ENST00000464940 KRTAP13-4Q3LI77 160 aa2.63□□□□□ -1.99
KPNA1-202ENST00000464940 FCGBPQ9Y6R7 5405 aaPredicted RBP2.62□□□□□ -1.99
KPNA1-202ENST00000464940 CRIPTQ9P021 101 aa2.61□□□□□ -1.99
KPNA1-202ENST00000464940 MT2AP02795 61 aa2.6□□□□□ -1.99
KPNA1-202ENST00000464940 MACF1Q9UPN3 7388 aaKnown RBP2.6□□□□□ -1.99
KPNA1-202ENST00000464940 KRTAP6-3Q3LI67 103 aa2.59□□□□□ -1.99
KPNA1-202ENST00000464940 MT1FP04733 61 aa2.58□□□□□ -2
KPNA1-202ENST00000464940 C10orf95Q9H7T3 257 aa2.55□□□□□ -2
KPNA1-202ENST00000464940 S4R3F8 94 aa2.55□□□□□ -2
KPNA1-202ENST00000464940 SYNE2Q8WXH0 6885 aaKnown RBP2.54□□□□□ -2
KPNA1-202ENST00000464940 KRTAP12-1P59990 96 aa2.53□□□□□ -2
KPNA1-202ENST00000464940 KRTAP19-6Q3LI70 58 aa2.53□□□□□ -2
KPNA1-202ENST00000464940 A0A0D9SG42 100 aa2.52□□□□□ -2.01
KPNA1-202ENST00000464940 INE1O15225 51 aa2.47□□□□□ -2.01
KPNA1-202ENST00000464940 M0QZ58 72 aa2.46□□□□□ -2.02
KPNA1-202ENST00000464940 MUC12Q9UKN1 5478 aa2.43□□□□□ -2.02
KPNA1-202ENST00000464940 KRTAP12-3P60328 96 aa2.38□□□□□ -2.03
KPNA1-202ENST00000464940 NEBP20929 6669 aa2.37□□□□□ -2.03
KPNA1-202ENST00000464940 MT1BP07438 61 aa2.35□□□□□ -2.03
KPNA1-202ENST00000464940 KRTAP19-8Q3LI54 63 aa2.35□□□□□ -2.03
KPNA1-202ENST00000464940 PLAC4Q8WY50 150 aa2.35□□□□□ -2.03
KPNA1-202ENST00000464940 SPRR2GQ9BYE4 73 aa2.35□□□□□ -2.03
KPNA1-202ENST00000464940 KRTAP21-2Q3LI59 83 aa2.34□□□□□ -2.03
KPNA1-202ENST00000464940 MDN1Q9NU22 5596 aa2.34□□□□□ -2.04
KPNA1-202ENST00000464940 KMT2DO14686 5537 aa2.32□□□□□ -2.04
KPNA1-202ENST00000464940 KRTAP20-1Q3LI63 56 aa2.32□□□□□ -2.04
KPNA1-202ENST00000464940 KRTAP2-3P0C7H8 128 aa2.23□□□□□ -2.05
KPNA1-202ENST00000464940 KRTAP2-4Q9BYR9 128 aa2.23□□□□□ -2.05
KPNA1-202ENST00000464940 KRTAP12-4P60329 112 aa2.21□□□□□ -2.06
KPNA1-202ENST00000464940 SPRR2FQ96RM1 72 aa2.21□□□□□ -2.06
KPNA1-202ENST00000464940 SPRR2EP22531 72 aa2.2□□□□□ -2.06
KPNA1-202ENST00000464940 SPRR2BP35325 72 aa2.2□□□□□ -2.06
KPNA1-202ENST00000464940 SPRR2AP35326 72 aa2.2□□□□□ -2.06
KPNA1-202ENST00000464940 MT1XP80297 61 aa2.18□□□□□ -2.06
KPNA1-202ENST00000464940 KRTAP8-1Q8IUC2 63 aa2.18□□□□□ -2.06
KPNA1-202ENST00000464940 TNP1P09430 55 aa2.17□□□□□ -2.06
KPNA1-202ENST00000464940 KRTAP2-1Q9BYU5 128 aa2.16□□□□□ -2.06
KPNA1-202ENST00000464940 SPRR2DP22532 72 aa2.13□□□□□ -2.07
KPNA1-202ENST00000464940 DSTQ03001 7570 aaKnown RBP2.05□□□□□ -2.08
KPNA1-202ENST00000464940 GPR98Q8WXG9 6306 aa1.97□□□□□ -2.09
KPNA1-202ENST00000464940 KRTAP19-3Q7Z4W3 81 aa1.96□□□□□ -2.1
KPNA1-202ENST00000464940 KRTAP19-7Q3SYF9 63 aa1.95□□□□□ -2.1
KPNA1-202ENST00000464940 MT1EP04732 61 aa1.94□□□□□ -2.1
KPNA1-202ENST00000464940 HMCN1Q96RW7 5635 aa1.92□□□□□ -2.1
KPNA1-202ENST00000464940 MT1GP13640 62 aa1.9□□□□□ -2.11
KPNA1-202ENST00000464940 MT4P47944 62 aa1.86□□□□□ -2.11
KPNA1-202ENST00000464940 KRTAP19-5Q3LI72 72 aa1.86□□□□□ -2.11
KPNA1-202ENST00000464940 AHNAK2Q8IVF2 5795 aa1.86□□□□□ -2.11
KPNA1-202ENST00000464940 MT1MQ8N339 61 aa1.85□□□□□ -2.11
KPNA1-202ENST00000464940 MT1LQ93083 61 aa1.84□□□□□ -2.11
KPNA1-202ENST00000464940 KRTAP5-10Q6L8G5 202 aa1.82□□□□□ -2.12
KPNA1-202ENST00000464940 KRTAP20-2Q3LI61 65 aa1.73□□□□□ -2.13
KPNA1-202ENST00000464940 SYNE1Q8NF91 8797 aaKnown RBP1.72□□□□□ -2.13
KPNA1-202ENST00000464940 MT1AP04731 61 aa1.57□□□□□ -2.16
KPNA1-202ENST00000464940 MUC5BQ9HC84 5762 aaPredicted RBP1.55□□□□□ -2.16
KPNA1-202ENST00000464940 KRTAP6-1Q3LI64 71 aa1.55□□□□□ -2.16
KPNA1-202ENST00000464940 MUC5ACP98088 5654 aa1.54□□□□□ -2.16
KPNA1-202ENST00000464940 AHNAKQ09666 5890 aaKnown RBP1.52□□□□□ -2.17
KPNA1-202ENST00000464940 KRTAP6-2Q3LI66 62 aa1.5□□□□□ -2.17
KPNA1-202ENST00000464940 PRM1P04553 51 aa1.43□□□□□ -2.18
KPNA1-202ENST00000464940 MUC16Q8WXI7 14507 aa1.07□□□□□ -2.24
KPNA1-202ENST00000464940 PHGR1C9JFL3 82 aa1.06□□□□□ -2.24
KPNA1-202ENST00000464940 KRTAP21-1Q3LI58 79 aa0.96□□□□□ -2.26
Retrieved 78 of 20,778 RNA–protein pairs in 35.1 ms