RNA–Protein interactions for RNA: ENST00000464750.5

U2AF1-206, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best)

Gene U2AF1, Length 966 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-206ENST00000464750 C10orf95Q9H7T3 257 aa9.22□□□□□ -0.93
U2AF1-206ENST00000464750 LCE3AQ5TA76 89 aa9.21□□□□□ -0.94
U2AF1-206ENST00000464750 MT1LQ93083 61 aa9.21□□□□□ -0.94
U2AF1-206ENST00000464750 GPR98Q8WXG9 6306 aa9.21□□□□□ -0.94
U2AF1-206ENST00000464750 TNP1P09430 55 aa9.2□□□□□ -0.94
U2AF1-206ENST00000464750 MT1MQ8N339 61 aa9.2□□□□□ -0.94
U2AF1-206ENST00000464750 PRR15LQ9BU68 103 aa9.2□□□□□ -0.94
U2AF1-206ENST00000464750 ATP5EP56381 51 aaPredicted RBP9.19□□□□□ -0.94
U2AF1-206ENST00000464750 LINC01558Q9Y6Z2 57 aa9.07□□□□□ -0.96
U2AF1-206ENST00000464750 KRTAP4-3Q9BYR4 195 aa8.99□□□□□ -0.97
U2AF1-206ENST00000464750 KRTAP4-7Q9BYR0 210 aa8.98□□□□□ -0.97
U2AF1-206ENST00000464750 HMCN1Q96RW7 5635 aa8.94□□□□□ -0.98
U2AF1-206ENST00000464750 MT4P47944 62 aa8.93□□□□□ -0.98
U2AF1-206ENST00000464750 TMEM258P61165 79 aa8.89□□□□□ -0.99
U2AF1-206ENST00000464750 UQCR11O14957 56 aa8.88□□□□□ -0.99
U2AF1-206ENST00000464750 SVIPQ8NHG7 77 aa8.88□□□□□ -0.99
U2AF1-206ENST00000464750 KRTAP12-3P60328 96 aa8.84□□□□□ -0.99
U2AF1-206ENST00000464750 KRTAP5-4Q6L8H1 288 aa8.81□□□□□ -1
U2AF1-206ENST00000464750 AHNAK2Q8IVF2 5795 aa8.7□□□□□ -1.02
U2AF1-206ENST00000464750 KRTAP15-1Q3LI76 137 aa8.69□□□□□ -1.02
U2AF1-206ENST00000464750 KRTAP4-11Q9BYQ6 195 aa8.69□□□□□ -1.02
U2AF1-206ENST00000464750 MIR22HGQ0VDD5 57 aa8.68□□□□□ -1.02
U2AF1-206ENST00000464750 KRTAP25-1Q3LHN0 102 aa8.63□□□□□ -1.03
U2AF1-206ENST00000464750 KRTAP4-2Q9BYR5 136 aa8.59□□□□□ -1.03
U2AF1-206ENST00000464750 K7ERS5 55 aa8.54□□□□□ -1.04
U2AF1-206ENST00000464750 PSPHP1O15172 72 aa8.45□□□□□ -1.06
U2AF1-206ENST00000464750 KRTAP5-10Q6L8G5 202 aa8.44□□□□□ -1.06
U2AF1-206ENST00000464750 KRTAP5-5Q701N2 237 aaPredicted RBP8.44□□□□□ -1.06
U2AF1-206ENST00000464750 V9GYY9 64 aa8.43□□□□□ -1.06
U2AF1-206ENST00000464750 Q1T7F1 81 aa8.36□□□□□ -1.07
U2AF1-206ENST00000464750 KRTAP20-2Q3LI61 65 aa8.34□□□□□ -1.07
U2AF1-206ENST00000464750 SPRR5A0A1B0GTR4 108 aa8.27□□□□□ -1.09
U2AF1-206ENST00000464750 KRTAP12-4P60329 112 aa8.23□□□□□ -1.09
U2AF1-206ENST00000464750 KRTAP5-3Q6L8H2 238 aa8.23□□□□□ -1.09
U2AF1-206ENST00000464750 A6NED7 52 aa8.16□□□□□ -1.1
U2AF1-206ENST00000464750 PCP4P48539 62 aa8.16□□□□□ -1.1
U2AF1-206ENST00000464750 SYNE1Q8NF91 8797 aaKnown RBP8.16□□□□□ -1.1
U2AF1-206ENST00000464750 LCE3CQ5T5A8 94 aa8.12□□□□□ -1.11
U2AF1-206ENST00000464750 KRTAP5-7Q6L8G8 165 aa8.12□□□□□ -1.11
U2AF1-206ENST00000464750 CDC42SE1Q9NRR8 79 aa8.08□□□□□ -1.12
U2AF1-206ENST00000464750 A0A0A0MQY5 61 aa7.95□□□□□ -1.14
U2AF1-206ENST00000464750 ROMO1P60602 79 aa7.93□□□□□ -1.14
U2AF1-206ENST00000464750 RPS28P62857 69 aaKnown RBP7.84□□□□□ -1.15
U2AF1-206ENST00000464750 MT1AP04731 61 aa7.83□□□□□ -1.16
U2AF1-206ENST00000464750 KRTAP6-1Q3LI64 71 aa7.8□□□□□ -1.16
U2AF1-206ENST00000464750 KRTAP5-2Q701N4 177 aa7.71□□□□□ -1.18
U2AF1-206ENST00000464750 KRTAP9-6A8MVA2 160 aa7.67□□□□□ -1.18
U2AF1-206ENST00000464750 KRTAP6-2Q3LI66 62 aa7.46□□□□□ -1.22
U2AF1-206ENST00000464750 KRTAP5-8O75690 187 aa7.37□□□□□ -1.23
U2AF1-206ENST00000464750 OBSCNQ5VST9 7968 aa7.23□□□□□ -1.25
U2AF1-206ENST00000464750 AHNAKQ09666 5890 aaKnown RBP7.19□□□□□ -1.26
U2AF1-206ENST00000464750 MT3P25713 68 aa7.16□□□□□ -1.26
U2AF1-206ENST00000464750 MUC5BQ9HC84 5762 aaPredicted RBP7.14□□□□□ -1.27
U2AF1-206ENST00000464750 MUC5ACP98088 5654 aa7.13□□□□□ -1.27
U2AF1-206ENST00000464750 KRTAP5-1Q6L8H4 278 aa6.93□□□□□ -1.3
U2AF1-206ENST00000464750 BRK1Q8WUW1 75 aa6.83□□□□□ -1.32
U2AF1-206ENST00000464750 LCE1EQ5T753 118 aa6.58□□□□□ -1.36
U2AF1-206ENST00000464750 PRAC1Q96KF2 57 aa6.57□□□□□ -1.36
U2AF1-206ENST00000464750 PMAIP1Q13794 54 aa6.37□□□□□ -1.39
U2AF1-206ENST00000464750 NDUFAF8A1L188 74 aa6.25□□□□□ -1.41
U2AF1-206ENST00000464750 LCE1BQ5T7P3 118 aa6.24□□□□□ -1.41
U2AF1-206ENST00000464750 LCE1FQ5T754 118 aa6.2□□□□□ -1.42
U2AF1-206ENST00000464750 LCE1CQ5T751 118 aa6.11□□□□□ -1.43
U2AF1-206ENST00000464750 KRTAP5-11Q6L8G4 156 aa5.88□□□□□ -1.47
U2AF1-206ENST00000464750 LCE3DQ9BYE3 92 aa5.83□□□□□ -1.48
U2AF1-206ENST00000464750 PRO0628Q9UI54 55 aa5.8□□□□□ -1.48
U2AF1-206ENST00000464750 KRTAP5-6Q6L8G9 129 aaPredicted RBP5.56□□□□□ -1.52
U2AF1-206ENST00000464750 KTN1-AS1Q86SY8 53 aa5.55□□□□□ -1.52
U2AF1-206ENST00000464750 LCE3EQ5T5B0 92 aa5.47□□□□□ -1.53
U2AF1-206ENST00000464750 LUZP6Q538Z0 58 aa5.28□□□□□ -1.56
U2AF1-206ENST00000464750 KRTAP21-2Q3LI59 83 aa5.12□□□□□ -1.59
U2AF1-206ENST00000464750 PHGR1C9JFL3 82 aa4.93□□□□□ -1.62
U2AF1-206ENST00000464750 KRTAP4-4Q9BYR3 166 aa4.73□□□□□ -1.65
U2AF1-206ENST00000464750 MUC19Q7Z5P9 8384 aa4.47□□□□□ -1.69
U2AF1-206ENST00000464750 PRM1P04553 51 aa4.06□□□□□ -1.76
U2AF1-206ENST00000464750 KRTAP21-1Q3LI58 79 aa3.73□□□□□ -1.81
U2AF1-206ENST00000464750 INE1O15225 51 aa3.55□□□□□ -1.84
U2AF1-206ENST00000464750 MUC16Q8WXI7 14507 aa3.18□□□□□ -1.9
Retrieved 78 of 20,778 RNA–protein pairs in 81.7 ms