RNA–Protein interactions for RNA: ENST00000464611.1

ACTB-208, Transcript of actin beta, humanhuman

TSL 5

Gene ACTB, Length 715 nt, Biotype processed transcript, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-208ENST00000464611 SPRR5A0A1B0GTR4 108 aa3.52□□□□□ -1.85
ACTB-208ENST00000464611 LCE1AQ5T7P2 110 aa3.51□□□□□ -1.85
ACTB-208ENST00000464611 KRTAP4-4Q9BYR3 166 aa3.51□□□□□ -1.85
ACTB-208ENST00000464611 PRO2289Q9P1D8 64 aa3.47□□□□□ -1.85
ACTB-208ENST00000464611 KRTAP8-1Q8IUC2 63 aa3.46□□□□□ -1.86
ACTB-208ENST00000464611 A0A0A0MQY5 61 aa3.45□□□□□ -1.86
ACTB-208ENST00000464611 USH2AO75445 5202 aa3.43□□□□□ -1.86
ACTB-208ENST00000464611 MT1BP07438 61 aa3.43□□□□□ -1.86
ACTB-208ENST00000464611 LCE3AQ5TA76 89 aa3.42□□□□□ -1.86
ACTB-208ENST00000464611 KRTAP2-2Q9BYT5 123 aa3.41□□□□□ -1.86
ACTB-208ENST00000464611 FSIP2Q5CZC0 6907 aa3.41□□□□□ -1.86
ACTB-208ENST00000464611 KRTAP10-5P60370 271 aa3.4□□□□□ -1.87
ACTB-208ENST00000464611 CRCT1Q9UGL9 99 aa3.4□□□□□ -1.87
ACTB-208ENST00000464611 MT1XP80297 61 aa3.39□□□□□ -1.87
ACTB-208ENST00000464611 KRTAP10-12P60413 245 aa3.37□□□□□ -1.87
ACTB-208ENST00000464611 KRTAP19-6Q3LI70 58 aa3.34□□□□□ -1.87
ACTB-208ENST00000464611 SSPOA2VEC9 5147 aa3.33□□□□□ -1.88
ACTB-208ENST00000464611 KRTAP12-3P60328 96 aa3.33□□□□□ -1.88
ACTB-208ENST00000464611 FCGBPQ9Y6R7 5405 aaPredicted RBP3.22□□□□□ -1.89
ACTB-208ENST00000464611 MACF1Q9UPN3 7388 aaKnown RBP3.18□□□□□ -1.9
ACTB-208ENST00000464611 INE1O15225 51 aa3.18□□□□□ -1.9
ACTB-208ENST00000464611 OBSCNQ5VST9 7968 aa3.18□□□□□ -1.9
ACTB-208ENST00000464611 LCE3CQ5T5A8 94 aa3.15□□□□□ -1.91
ACTB-208ENST00000464611 KRTAP19-5Q3LI72 72 aa3.14□□□□□ -1.91
ACTB-208ENST00000464611 SYNE2Q8WXH0 6885 aaKnown RBP3.12□□□□□ -1.91
ACTB-208ENST00000464611 KRTAP6-3Q3LI67 103 aa3.04□□□□□ -1.92
ACTB-208ENST00000464611 KRTAP4-3Q9BYR4 195 aa3.04□□□□□ -1.92
ACTB-208ENST00000464611 KRTAP19-7Q3SYF9 63 aa3.02□□□□□ -1.93
ACTB-208ENST00000464611 KRTAP5-2Q701N4 177 aa3.02□□□□□ -1.93
ACTB-208ENST00000464611 KMT2DO14686 5537 aa3□□□□□ -1.93
ACTB-208ENST00000464611 KRTAP9-6A8MVA2 160 aa3□□□□□ -1.93
ACTB-208ENST00000464611 MT1EP04732 61 aa2.96□□□□□ -1.94
ACTB-208ENST00000464611 MT1LQ93083 61 aa2.96□□□□□ -1.94
ACTB-208ENST00000464611 SPRR2FQ96RM1 72 aa2.96□□□□□ -1.94
ACTB-208ENST00000464611 NEBP20929 6669 aa2.94□□□□□ -1.94
ACTB-208ENST00000464611 KRTAP2-3P0C7H8 128 aa2.92□□□□□ -1.94
ACTB-208ENST00000464611 KRTAP2-4Q9BYR9 128 aa2.92□□□□□ -1.94
ACTB-208ENST00000464611 KRTAP2-1Q9BYU5 128 aa2.92□□□□□ -1.94
ACTB-208ENST00000464611 MUC12Q9UKN1 5478 aa2.9□□□□□ -1.94
ACTB-208ENST00000464611 MT1GP13640 62 aa2.87□□□□□ -1.95
ACTB-208ENST00000464611 SPRR2EP22531 72 aa2.87□□□□□ -1.95
ACTB-208ENST00000464611 SPRR2BP35325 72 aa2.87□□□□□ -1.95
ACTB-208ENST00000464611 SPRR2AP35326 72 aa2.87□□□□□ -1.95
ACTB-208ENST00000464611 KRTAP19-3Q7Z4W3 81 aa2.82□□□□□ -1.96
ACTB-208ENST00000464611 MDN1Q9NU22 5596 aa2.82□□□□□ -1.96
ACTB-208ENST00000464611 SPRR2DP22532 72 aa2.77□□□□□ -1.97
ACTB-208ENST00000464611 MT1MQ8N339 61 aa2.77□□□□□ -1.97
ACTB-208ENST00000464611 MT3P25713 68 aa2.74□□□□□ -1.97
ACTB-208ENST00000464611 KRTAP20-1Q3LI63 56 aa2.72□□□□□ -1.97
ACTB-208ENST00000464611 MT1AP04731 61 aa2.6□□□□□ -1.99
ACTB-208ENST00000464611 DSTQ03001 7570 aaKnown RBP2.59□□□□□ -2
ACTB-208ENST00000464611 KRTAP5-8O75690 187 aa2.57□□□□□ -2
ACTB-208ENST00000464611 KRTAP12-4P60329 112 aa2.52□□□□□ -2.01
ACTB-208ENST00000464611 KRTAP5-5Q701N2 237 aaPredicted RBP2.47□□□□□ -2.01
ACTB-208ENST00000464611 KRTAP6-1Q3LI64 71 aa2.45□□□□□ -2.02
ACTB-208ENST00000464611 LCE3DQ9BYE3 92 aa2.44□□□□□ -2.02
ACTB-208ENST00000464611 LCE3EQ5T5B0 92 aa2.42□□□□□ -2.02
ACTB-208ENST00000464611 LCE1FQ5T754 118 aa2.41□□□□□ -2.02
ACTB-208ENST00000464611 MT4P47944 62 aa2.39□□□□□ -2.03
ACTB-208ENST00000464611 SYNE1Q8NF91 8797 aaKnown RBP2.36□□□□□ -2.03
ACTB-208ENST00000464611 HMCN1Q96RW7 5635 aa2.3□□□□□ -2.04
ACTB-208ENST00000464611 KRTAP20-2Q3LI61 65 aa2.29□□□□□ -2.04
ACTB-208ENST00000464611 LCE1CQ5T751 118 aa2.27□□□□□ -2.05
ACTB-208ENST00000464611 LCE1BQ5T7P3 118 aa2.27□□□□□ -2.05
ACTB-208ENST00000464611 KRTAP6-2Q3LI66 62 aa2.21□□□□□ -2.06
ACTB-208ENST00000464611 GPR98Q8WXG9 6306 aa2.21□□□□□ -2.06
ACTB-208ENST00000464611 PRM1P04553 51 aa2.18□□□□□ -2.06
ACTB-208ENST00000464611 AHNAK2Q8IVF2 5795 aa2.14□□□□□ -2.07
ACTB-208ENST00000464611 KRTAP5-10Q6L8G5 202 aa2.1□□□□□ -2.07
ACTB-208ENST00000464611 MUC19Q7Z5P9 8384 aa2□□□□□ -2.09
ACTB-208ENST00000464611 KRTAP5-7Q6L8G8 165 aa1.99□□□□□ -2.09
ACTB-208ENST00000464611 MUC5ACP98088 5654 aa1.85□□□□□ -2.11
ACTB-208ENST00000464611 MUC5BQ9HC84 5762 aaPredicted RBP1.71□□□□□ -2.14
ACTB-208ENST00000464611 AHNAKQ09666 5890 aaKnown RBP1.7□□□□□ -2.14
ACTB-208ENST00000464611 KRTAP21-2Q3LI59 83 aa1.67□□□□□ -2.14
ACTB-208ENST00000464611 KRTAP21-1Q3LI58 79 aa1.44□□□□□ -2.18
ACTB-208ENST00000464611 PHGR1C9JFL3 82 aa1.37□□□□□ -2.19
ACTB-208ENST00000464611 MUC16Q8WXI7 14507 aa0.85□□□□□ -2.27
Retrieved 78 of 20,778 RNA–protein pairs in 115.7 ms