RNA–Protein interactions for RNA: ENST00000464547.5

ATF3-207, Transcript of activating transcription factor 3, humanhuman

TSL 1 (best)

Gene ATF3, Length 767 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATF3-207ENST00000464547 KRTAP8-1Q8IUC2 63 aa3.85□□□□□ -1.79
ATF3-207ENST00000464547 USH2AO75445 5202 aa3.81□□□□□ -1.8
ATF3-207ENST00000464547 KRTAP12-3P60328 96 aa3.75□□□□□ -1.81
ATF3-207ENST00000464547 SPRR5A0A1B0GTR4 108 aa3.72□□□□□ -1.81
ATF3-207ENST00000464547 NDUFAF8A1L188 74 aa3.72□□□□□ -1.81
ATF3-207ENST00000464547 KRTAP19-6Q3LI70 58 aa3.72□□□□□ -1.81
ATF3-207ENST00000464547 KRTAP19-5Q3LI72 72 aa3.7□□□□□ -1.82
ATF3-207ENST00000464547 SSPOA2VEC9 5147 aa3.66□□□□□ -1.82
ATF3-207ENST00000464547 LUZP6Q538Z0 58 aa3.63□□□□□ -1.83
ATF3-207ENST00000464547 KRTAP19-7Q3SYF9 63 aa3.6□□□□□ -1.83
ATF3-207ENST00000464547 A0A0A0MQY5 61 aa3.57□□□□□ -1.84
ATF3-207ENST00000464547 LCE3CQ5T5A8 94 aa3.53□□□□□ -1.84
ATF3-207ENST00000464547 MT1EP04732 61 aa3.52□□□□□ -1.85
ATF3-207ENST00000464547 KMT2DO14686 5537 aa3.51□□□□□ -1.85
ATF3-207ENST00000464547 SYNE2Q8WXH0 6885 aaKnown RBP3.5□□□□□ -1.85
ATF3-207ENST00000464547 MT1LQ93083 61 aa3.48□□□□□ -1.85
ATF3-207ENST00000464547 MACF1Q9UPN3 7388 aaKnown RBP3.45□□□□□ -1.86
ATF3-207ENST00000464547 FCGBPQ9Y6R7 5405 aaPredicted RBP3.43□□□□□ -1.86
ATF3-207ENST00000464547 NEBP20929 6669 aa3.41□□□□□ -1.86
ATF3-207ENST00000464547 KRTAP9-6A8MVA2 160 aa3.37□□□□□ -1.87
ATF3-207ENST00000464547 KRTAP20-1Q3LI63 56 aa3.34□□□□□ -1.87
ATF3-207ENST00000464547 KRTAP19-3Q7Z4W3 81 aa3.34□□□□□ -1.87
ATF3-207ENST00000464547 MT1GP13640 62 aa3.32□□□□□ -1.88
ATF3-207ENST00000464547 MT1MQ8N339 61 aa3.31□□□□□ -1.88
ATF3-207ENST00000464547 SPRR2FQ96RM1 72 aa3.31□□□□□ -1.88
ATF3-207ENST00000464547 KRTAP6-3Q3LI67 103 aa3.3□□□□□ -1.88
ATF3-207ENST00000464547 KRTAP4-3Q9BYR4 195 aa3.29□□□□□ -1.88
ATF3-207ENST00000464547 GPR98Q8WXG9 6306 aa3.23□□□□□ -1.89
ATF3-207ENST00000464547 KRTAP5-9P26371 169 aa3.21□□□□□ -1.9
ATF3-207ENST00000464547 KRTAP2-3P0C7H8 128 aa3.18□□□□□ -1.9
ATF3-207ENST00000464547 KRTAP2-4Q9BYR9 128 aa3.18□□□□□ -1.9
ATF3-207ENST00000464547 KRTAP2-1Q9BYU5 128 aa3.18□□□□□ -1.9
ATF3-207ENST00000464547 MUC12Q9UKN1 5478 aa3.18□□□□□ -1.9
ATF3-207ENST00000464547 LCE1AQ5T7P2 110 aa3.16□□□□□ -1.9
ATF3-207ENST00000464547 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.14□□□□□ -1.91
ATF3-207ENST00000464547 SPRR2EP22531 72 aa3.11□□□□□ -1.91
ATF3-207ENST00000464547 SPRR2BP35325 72 aa3.11□□□□□ -1.91
ATF3-207ENST00000464547 SPRR2AP35326 72 aa3.11□□□□□ -1.91
ATF3-207ENST00000464547 KRTAP5-11Q6L8G4 156 aa3.08□□□□□ -1.92
ATF3-207ENST00000464547 INE1O15225 51 aa3.05□□□□□ -1.92
ATF3-207ENST00000464547 SPRR2DP22532 72 aa2.99□□□□□ -1.93
ATF3-207ENST00000464547 MDN1Q9NU22 5596 aa2.97□□□□□ -1.93
ATF3-207ENST00000464547 MT1AP04731 61 aa2.96□□□□□ -1.94
ATF3-207ENST00000464547 KRTAP5-5Q701N2 237 aaPredicted RBP2.96□□□□□ -1.94
ATF3-207ENST00000464547 KRTAP2-2Q9BYT5 123 aa2.96□□□□□ -1.94
ATF3-207ENST00000464547 KRTAP6-1Q3LI64 71 aa2.94□□□□□ -1.94
ATF3-207ENST00000464547 LCE1EQ5T753 118 aa2.89□□□□□ -1.95
ATF3-207ENST00000464547 DSTQ03001 7570 aaKnown RBP2.82□□□□□ -1.96
ATF3-207ENST00000464547 SYNE1Q8NF91 8797 aaKnown RBP2.76□□□□□ -1.97
ATF3-207ENST00000464547 KRTAP5-4Q6L8H1 288 aa2.74□□□□□ -1.97
ATF3-207ENST00000464547 KRTAP5-1Q6L8H4 278 aa2.73□□□□□ -1.97
ATF3-207ENST00000464547 KRTAP12-4P60329 112 aa2.72□□□□□ -1.97
ATF3-207ENST00000464547 AHNAK2Q8IVF2 5795 aa2.69□□□□□ -1.98
ATF3-207ENST00000464547 KRTAP6-2Q3LI66 62 aa2.67□□□□□ -1.98
ATF3-207ENST00000464547 LCE3DQ9BYE3 92 aa2.66□□□□□ -1.98
ATF3-207ENST00000464547 MT3P25713 68 aa2.65□□□□□ -1.99
ATF3-207ENST00000464547 KRTAP5-10Q6L8G5 202 aa2.65□□□□□ -1.99
ATF3-207ENST00000464547 KRTAP5-7Q6L8G8 165 aa2.64□□□□□ -1.99
ATF3-207ENST00000464547 KRTAP4-4Q9BYR3 166 aa2.63□□□□□ -1.99
ATF3-207ENST00000464547 LCE3EQ5T5B0 92 aa2.62□□□□□ -1.99
ATF3-207ENST00000464547 MT4P47944 62 aa2.6□□□□□ -1.99
ATF3-207ENST00000464547 HMCN1Q96RW7 5635 aa2.6□□□□□ -1.99
ATF3-207ENST00000464547 KRTAP20-2Q3LI61 65 aa2.56□□□□□ -2
ATF3-207ENST00000464547 KRTAP5-2Q701N4 177 aa2.52□□□□□ -2.01
ATF3-207ENST00000464547 AHNAKQ09666 5890 aaKnown RBP2.44□□□□□ -2.02
ATF3-207ENST00000464547 PRM1P04553 51 aa2.38□□□□□ -2.03
ATF3-207ENST00000464547 OBSCNQ5VST9 7968 aa2.35□□□□□ -2.03
ATF3-207ENST00000464547 MUC5ACP98088 5654 aa2.33□□□□□ -2.04
ATF3-207ENST00000464547 MUC5BQ9HC84 5762 aaPredicted RBP2.33□□□□□ -2.04
ATF3-207ENST00000464547 LCE1FQ5T754 118 aa2.31□□□□□ -2.04
ATF3-207ENST00000464547 LCE1BQ5T7P3 118 aa2.15□□□□□ -2.07
ATF3-207ENST00000464547 KRTAP5-8O75690 187 aa2.09□□□□□ -2.07
ATF3-207ENST00000464547 LCE1CQ5T751 118 aa2.09□□□□□ -2.07
ATF3-207ENST00000464547 KRTAP21-2Q3LI59 83 aa1.92□□□□□ -2.1
ATF3-207ENST00000464547 MUC19Q7Z5P9 8384 aa1.58□□□□□ -2.16
ATF3-207ENST00000464547 PHGR1C9JFL3 82 aa1.58□□□□□ -2.16
ATF3-207ENST00000464547 KRTAP21-1Q3LI58 79 aa1.48□□□□□ -2.17
ATF3-207ENST00000464547 MUC16Q8WXI7 14507 aa1.07□□□□□ -2.24
Retrieved 78 of 20,778 RNA–protein pairs in 63.2 ms