RNA–Protein interactions for RNA: ENST00000464286.1

CLSTN1-204, Transcript of calsyntenin 1, humanhuman

TSL 2

Gene CLSTN1, Length 563 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-204ENST00000464286 PRO2289Q9P1D8 64 aa3.11□□□□□ -1.91
CLSTN1-204ENST00000464286 KRTAP5-9P26371 169 aa3.08□□□□□ -1.92
CLSTN1-204ENST00000464286 LRP2P98164 4655 aa3.04□□□□□ -1.92
CLSTN1-204ENST00000464286 KRTAP19-2Q3LHN2 52 aa3.04□□□□□ -1.92
CLSTN1-204ENST00000464286 SPRR2GQ9BYE4 73 aa3.02□□□□□ -1.93
CLSTN1-204ENST00000464286 KRTAP4-1Q9BYQ7 146 aa3.02□□□□□ -1.93
CLSTN1-204ENST00000464286 MUC17Q685J3 4493 aa2.97□□□□□ -1.93
CLSTN1-204ENST00000464286 KRTAP8-1Q8IUC2 63 aa2.95□□□□□ -1.94
CLSTN1-204ENST00000464286 FLGP20930 4061 aaPredicted RBP2.92□□□□□ -1.94
CLSTN1-204ENST00000464286 LCE3AQ5TA76 89 aa2.92□□□□□ -1.94
CLSTN1-204ENST00000464286 LPAP08519 4548 aa2.92□□□□□ -1.94
CLSTN1-204ENST00000464286 LCE3EQ5T5B0 92 aa2.91□□□□□ -1.94
CLSTN1-204ENST00000464286 SYNE2Q8WXH0 6885 aaKnown RBP2.89□□□□□ -1.95
CLSTN1-204ENST00000464286 M0R2T5 61 aa2.89□□□□□ -1.95
CLSTN1-204ENST00000464286 NEBP20929 6669 aa2.88□□□□□ -1.95
CLSTN1-204ENST00000464286 SSPOA2VEC9 5147 aa2.86□□□□□ -1.95
CLSTN1-204ENST00000464286 GPR98Q8WXG9 6306 aa2.86□□□□□ -1.95
CLSTN1-204ENST00000464286 KRTAP19-8Q3LI54 63 aa2.86□□□□□ -1.95
CLSTN1-204ENST00000464286 KRTAP12-3P60328 96 aa2.85□□□□□ -1.95
CLSTN1-204ENST00000464286 KRTAP10-10P60014 251 aa2.83□□□□□ -1.96
CLSTN1-204ENST00000464286 KRTAP20-1Q3LI63 56 aa2.82□□□□□ -1.96
CLSTN1-204ENST00000464286 OBSCNQ5VST9 7968 aa2.81□□□□□ -1.96
CLSTN1-204ENST00000464286 KRTAP4-3Q9BYR4 195 aa2.81□□□□□ -1.96
CLSTN1-204ENST00000464286 MACF1Q9UPN3 7388 aaKnown RBP2.8□□□□□ -1.96
CLSTN1-204ENST00000464286 MT2AP02795 61 aa2.77□□□□□ -1.97
CLSTN1-204ENST00000464286 MT1HP80294 61 aa2.76□□□□□ -1.97
CLSTN1-204ENST00000464286 MT1FP04733 61 aa2.73□□□□□ -1.97
CLSTN1-204ENST00000464286 MT1XP80297 61 aa2.73□□□□□ -1.97
CLSTN1-204ENST00000464286 MT1BP07438 61 aa2.7□□□□□ -1.98
CLSTN1-204ENST00000464286 FCGBPQ9Y6R7 5405 aaPredicted RBP2.69□□□□□ -1.98
CLSTN1-204ENST00000464286 USH2AO75445 5202 aa2.67□□□□□ -1.98
CLSTN1-204ENST00000464286 KRTAP5-2Q701N4 177 aa2.61□□□□□ -1.99
CLSTN1-204ENST00000464286 KRTAP6-3Q3LI67 103 aa2.6□□□□□ -1.99
CLSTN1-204ENST00000464286 KRTAP5-5Q701N2 237 aaPredicted RBP2.6□□□□□ -1.99
CLSTN1-204ENST00000464286 MUC12Q9UKN1 5478 aa2.6□□□□□ -1.99
CLSTN1-204ENST00000464286 KRTAP19-5Q3LI72 72 aa2.59□□□□□ -1.99
CLSTN1-204ENST00000464286 KMT2DO14686 5537 aa2.58□□□□□ -2
CLSTN1-204ENST00000464286 KRTAP2-3P0C7H8 128 aa2.57□□□□□ -2
CLSTN1-204ENST00000464286 KRTAP2-4Q9BYR9 128 aa2.57□□□□□ -2
CLSTN1-204ENST00000464286 KRTAP2-1Q9BYU5 128 aa2.57□□□□□ -2
CLSTN1-204ENST00000464286 AHNAK2Q8IVF2 5795 aa2.45□□□□□ -2.02
CLSTN1-204ENST00000464286 LCE1CQ5T751 118 aa2.45□□□□□ -2.02
CLSTN1-204ENST00000464286 LCE1BQ5T7P3 118 aa2.45□□□□□ -2.02
CLSTN1-204ENST00000464286 KRTAP19-7Q3SYF9 63 aa2.42□□□□□ -2.02
CLSTN1-204ENST00000464286 MT1LQ93083 61 aa2.41□□□□□ -2.02
CLSTN1-204ENST00000464286 MT1EP04732 61 aa2.4□□□□□ -2.03
CLSTN1-204ENST00000464286 MDN1Q9NU22 5596 aa2.35□□□□□ -2.03
CLSTN1-204ENST00000464286 LCE3DQ9BYE3 92 aa2.3□□□□□ -2.04
CLSTN1-204ENST00000464286 MT1GP13640 62 aa2.29□□□□□ -2.04
CLSTN1-204ENST00000464286 KRTAP12-4P60329 112 aa2.29□□□□□ -2.04
CLSTN1-204ENST00000464286 DSTQ03001 7570 aaKnown RBP2.29□□□□□ -2.04
CLSTN1-204ENST00000464286 KRTAP5-10Q6L8G5 202 aa2.24□□□□□ -2.05
CLSTN1-204ENST00000464286 KRTAP5-7Q6L8G8 165 aa2.24□□□□□ -2.05
CLSTN1-204ENST00000464286 AHNAKQ09666 5890 aaKnown RBP2.24□□□□□ -2.05
CLSTN1-204ENST00000464286 MT1AP04731 61 aa2.23□□□□□ -2.05
CLSTN1-204ENST00000464286 KRTAP19-3Q7Z4W3 81 aa2.23□□□□□ -2.05
CLSTN1-204ENST00000464286 KRTAP19-6Q3LI70 58 aa2.22□□□□□ -2.05
CLSTN1-204ENST00000464286 MT1MQ8N339 61 aa2.22□□□□□ -2.05
CLSTN1-204ENST00000464286 HMCN1Q96RW7 5635 aa2.16□□□□□ -2.06
CLSTN1-204ENST00000464286 KRTAP5-8O75690 187 aa2.13□□□□□ -2.07
CLSTN1-204ENST00000464286 SPRR2EP22531 72 aa2.11□□□□□ -2.07
CLSTN1-204ENST00000464286 SPRR2BP35325 72 aa2.11□□□□□ -2.07
CLSTN1-204ENST00000464286 SPRR2AP35326 72 aa2.11□□□□□ -2.07
CLSTN1-204ENST00000464286 MUC5BQ9HC84 5762 aaPredicted RBP2.1□□□□□ -2.07
CLSTN1-204ENST00000464286 SPRR2DP22532 72 aa2.04□□□□□ -2.08
CLSTN1-204ENST00000464286 PRM1P04553 51 aa2.02□□□□□ -2.09
CLSTN1-204ENST00000464286 SPRR2FQ96RM1 72 aa2.02□□□□□ -2.09
CLSTN1-204ENST00000464286 MUC5ACP98088 5654 aa2□□□□□ -2.09
CLSTN1-204ENST00000464286 KRTAP6-1Q3LI64 71 aa1.98□□□□□ -2.09
CLSTN1-204ENST00000464286 MUC19Q7Z5P9 8384 aa1.98□□□□□ -2.09
CLSTN1-204ENST00000464286 KRTAP6-2Q3LI66 62 aa1.9□□□□□ -2.11
CLSTN1-204ENST00000464286 MT4P47944 62 aa1.89□□□□□ -2.11
CLSTN1-204ENST00000464286 SYNE1Q8NF91 8797 aaKnown RBP1.83□□□□□ -2.12
CLSTN1-204ENST00000464286 KRTAP21-2Q3LI59 83 aa1.76□□□□□ -2.13
CLSTN1-204ENST00000464286 KRTAP20-2Q3LI61 65 aa1.53□□□□□ -2.16
CLSTN1-204ENST00000464286 PHGR1C9JFL3 82 aa1.36□□□□□ -2.19
CLSTN1-204ENST00000464286 KRTAP21-1Q3LI58 79 aa1.33□□□□□ -2.2
CLSTN1-204ENST00000464286 MUC16Q8WXI7 14507 aa0.91□□□□□ -2.26
Retrieved 78 of 20,778 RNA–protein pairs in 53.7 ms