RNA–Protein interactions for RNA: ENST00000464187.1

COL5A1-205, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 2

Gene COL5A1, Length 1,830 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-205ENST00000464187 LCE3CQ5T5A8 94 aa5.2□□□□□ -1.58
COL5A1-205ENST00000464187 MUC12Q9UKN1 5478 aa5.17□□□□□ -1.58
COL5A1-205ENST00000464187 KRTAP5-9P26371 169 aa5.17□□□□□ -1.58
COL5A1-205ENST00000464187 MT1LQ93083 61 aa5.12□□□□□ -1.59
COL5A1-205ENST00000464187 KRTAP6-3Q3LI67 103 aa5.1□□□□□ -1.59
COL5A1-205ENST00000464187 A0A0A0MQY5 61 aa5.09□□□□□ -1.59
COL5A1-205ENST00000464187 KRTAP19-3Q7Z4W3 81 aa5.06□□□□□ -1.6
COL5A1-205ENST00000464187 MDN1Q9NU22 5596 aa5.03□□□□□ -1.6
COL5A1-205ENST00000464187 KRTAP4-7Q9BYR0 210 aa5.02□□□□□ -1.61
COL5A1-205ENST00000464187 KRTAP9-7A8MTY7 169 aa5□□□□□ -1.61
COL5A1-205ENST00000464187 KRTAP19-4Q3LI73 84 aa5□□□□□ -1.61
COL5A1-205ENST00000464187 KRTAP9-6A8MVA2 160 aa5□□□□□ -1.61
COL5A1-205ENST00000464187 MT1GP13640 62 aa5□□□□□ -1.61
COL5A1-205ENST00000464187 LCE1AQ5T7P2 110 aa4.99□□□□□ -1.61
COL5A1-205ENST00000464187 LCE5AQ5TCM9 118 aa4.97□□□□□ -1.61
COL5A1-205ENST00000464187 SPRR2EP22531 72 aa4.95□□□□□ -1.62
COL5A1-205ENST00000464187 SPRR2BP35325 72 aa4.95□□□□□ -1.62
COL5A1-205ENST00000464187 SPRR2AP35326 72 aa4.95□□□□□ -1.62
COL5A1-205ENST00000464187 MT1MQ8N339 61 aa4.93□□□□□ -1.62
COL5A1-205ENST00000464187 KRTAP4-3Q9BYR4 195 aa4.85□□□□□ -1.63
COL5A1-205ENST00000464187 DSTQ03001 7570 aaKnown RBP4.83□□□□□ -1.64
COL5A1-205ENST00000464187 SPRR2DP22532 72 aa4.77□□□□□ -1.65
COL5A1-205ENST00000464187 NEBP20929 6669 aa4.76□□□□□ -1.65
COL5A1-205ENST00000464187 KRTAP2-3P0C7H8 128 aa4.74□□□□□ -1.65
COL5A1-205ENST00000464187 KRTAP2-4Q9BYR9 128 aa4.74□□□□□ -1.65
COL5A1-205ENST00000464187 KRTAP2-1Q9BYU5 128 aa4.74□□□□□ -1.65
COL5A1-205ENST00000464187 LOC100996750A0A140TA64 210 aa4.69□□□□□ -1.66
COL5A1-205ENST00000464187 INE1O15225 51 aa4.69□□□□□ -1.66
COL5A1-205ENST00000464187 LCE3BQ5TA77 95 aa4.59□□□□□ -1.67
COL5A1-205ENST00000464187 KRTAP5-5Q701N2 237 aaPredicted RBP4.46□□□□□ -1.69
COL5A1-205ENST00000464187 KRTAP20-1Q3LI63 56 aa4.42□□□□□ -1.7
COL5A1-205ENST00000464187 KRTAP2-2Q9BYT5 123 aa4.38□□□□□ -1.71
COL5A1-205ENST00000464187 MT1AP04731 61 aa4.34□□□□□ -1.71
COL5A1-205ENST00000464187 KRTAP6-1Q3LI64 71 aa4.32□□□□□ -1.72
COL5A1-205ENST00000464187 KRTAP5-4Q6L8H1 288 aa4.29□□□□□ -1.72
COL5A1-205ENST00000464187 SYNE1Q8NF91 8797 aaKnown RBP4.29□□□□□ -1.72
COL5A1-205ENST00000464187 LCE4AQ5TA78 99 aa4.22□□□□□ -1.73
COL5A1-205ENST00000464187 MT4P47944 62 aa4.16□□□□□ -1.74
COL5A1-205ENST00000464187 KRTAP12-4P60329 112 aa4.16□□□□□ -1.74
COL5A1-205ENST00000464187 KRTAP4-9Q9BYQ8 210 aa4.14□□□□□ -1.75
COL5A1-205ENST00000464187 KRTAP9-4Q9BYQ2 154 aa4.14□□□□□ -1.75
COL5A1-205ENST00000464187 KRTAP4-6Q9BYQ5 205 aa4.12□□□□□ -1.75
COL5A1-205ENST00000464187 LCE1DQ5T752 114 aa4.09□□□□□ -1.75
COL5A1-205ENST00000464187 HMCN1Q96RW7 5635 aa4.04□□□□□ -1.76
COL5A1-205ENST00000464187 KRTAP20-2Q3LI61 65 aa4.02□□□□□ -1.77
COL5A1-205ENST00000464187 KRTAP6-2Q3LI66 62 aa4□□□□□ -1.77
COL5A1-205ENST00000464187 LCE3DQ9BYE3 92 aa3.95□□□□□ -1.78
COL5A1-205ENST00000464187 MT3P25713 68 aa3.94□□□□□ -1.78
COL5A1-205ENST00000464187 LCE3EQ5T5B0 92 aa3.88□□□□□ -1.79
COL5A1-205ENST00000464187 KRTAP5-3Q6L8H2 238 aa3.88□□□□□ -1.79
COL5A1-205ENST00000464187 KRTAP5-2Q701N4 177 aa3.87□□□□□ -1.79
COL5A1-205ENST00000464187 OBSCNQ5VST9 7968 aa3.81□□□□□ -1.8
COL5A1-205ENST00000464187 PRM1P04553 51 aa3.6□□□□□ -1.83
COL5A1-205ENST00000464187 AHNAK2Q8IVF2 5795 aa3.6□□□□□ -1.83
COL5A1-205ENST00000464187 KRTAP4-11Q9BYQ6 195 aa3.51□□□□□ -1.85
COL5A1-205ENST00000464187 GPR98Q8WXG9 6306 aa3.5□□□□□ -1.85
COL5A1-205ENST00000464187 KRTAP5-10Q6L8G5 202 aa3.44□□□□□ -1.86
COL5A1-205ENST00000464187 LCE1EQ5T753 118 aa3.44□□□□□ -1.86
COL5A1-205ENST00000464187 KRTAP5-8O75690 187 aa3.38□□□□□ -1.87
COL5A1-205ENST00000464187 KRTAP5-1Q6L8H4 278 aa3.38□□□□□ -1.87
COL5A1-205ENST00000464187 LCE1BQ5T7P3 118 aa3.25□□□□□ -1.89
COL5A1-205ENST00000464187 KRTAP5-7Q6L8G8 165 aa3.23□□□□□ -1.89
COL5A1-205ENST00000464187 KRTAP4-2Q9BYR5 136 aa3.22□□□□□ -1.89
COL5A1-205ENST00000464187 LCE1CQ5T751 118 aa3.21□□□□□ -1.89
COL5A1-205ENST00000464187 MUC5ACP98088 5654 aa3.21□□□□□ -1.9
COL5A1-205ENST00000464187 KRTAP9-9Q9BYP9 154 aa3.06□□□□□ -1.92
COL5A1-205ENST00000464187 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.99□□□□□ -1.93
COL5A1-205ENST00000464187 MUC5BQ9HC84 5762 aaPredicted RBP2.92□□□□□ -1.94
COL5A1-205ENST00000464187 KRTAP4-12Q9BQ66 201 aa2.87□□□□□ -1.95
COL5A1-205ENST00000464187 KRTAP5-11Q6L8G4 156 aa2.84□□□□□ -1.96
COL5A1-205ENST00000464187 KRTAP21-2Q3LI59 83 aa2.83□□□□□ -1.96
COL5A1-205ENST00000464187 AHNAKQ09666 5890 aaKnown RBP2.83□□□□□ -1.96
COL5A1-205ENST00000464187 LCE1FQ5T754 118 aa2.57□□□□□ -2
COL5A1-205ENST00000464187 KRTAP4-4Q9BYR3 166 aa2.54□□□□□ -2
COL5A1-205ENST00000464187 PHGR1C9JFL3 82 aa2.45□□□□□ -2.02
COL5A1-205ENST00000464187 MUC19Q7Z5P9 8384 aa2.27□□□□□ -2.05
COL5A1-205ENST00000464187 KRTAP21-1Q3LI58 79 aa2.25□□□□□ -2.05
COL5A1-205ENST00000464187 MUC16Q8WXI7 14507 aa1.58□□□□□ -2.16
Retrieved 78 of 20,778 RNA–protein pairs in 41.8 ms