RNA–Protein interactions for RNA: ENST00000464117.1

SHISA4-202, Transcript of shisa family member 4, humanhuman

TSL 2

Gene SHISA4, Length 914 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA4-202ENST00000464117 ATP5EP56381 51 aaPredicted RBP6.91□□□□□ -1.3
SHISA4-202ENST00000464117 KRTAP4-3Q9BYR4 195 aa6.89□□□□□ -1.31
SHISA4-202ENST00000464117 CCDC179H3BU77 68 aa6.87□□□□□ -1.31
SHISA4-202ENST00000464117 KRTAP5-4Q6L8H1 288 aa6.86□□□□□ -1.31
SHISA4-202ENST00000464117 LINC01558Q9Y6Z2 57 aa6.84□□□□□ -1.31
SHISA4-202ENST00000464117 AHNAK2Q8IVF2 5795 aa6.77□□□□□ -1.33
SHISA4-202ENST00000464117 KRTAP12-3P60328 96 aa6.77□□□□□ -1.33
SHISA4-202ENST00000464117 UQCR11O14957 56 aa6.72□□□□□ -1.33
SHISA4-202ENST00000464117 KRTAP4-6Q9BYQ5 205 aa6.71□□□□□ -1.34
SHISA4-202ENST00000464117 KRTAP4-7Q9BYR0 210 aa6.69□□□□□ -1.34
SHISA4-202ENST00000464117 TMEM258P61165 79 aa6.64□□□□□ -1.35
SHISA4-202ENST00000464117 KRTAP5-10Q6L8G5 202 aa6.61□□□□□ -1.35
SHISA4-202ENST00000464117 KRTAP25-1Q3LHN0 102 aa6.59□□□□□ -1.35
SHISA4-202ENST00000464117 MIR22HGQ0VDD5 57 aa6.53□□□□□ -1.36
SHISA4-202ENST00000464117 KRTAP5-5Q701N2 237 aaPredicted RBP6.53□□□□□ -1.36
SHISA4-202ENST00000464117 K7ERS5 55 aa6.48□□□□□ -1.37
SHISA4-202ENST00000464117 KRTAP20-2Q3LI61 65 aa6.47□□□□□ -1.37
SHISA4-202ENST00000464117 SPRR5A0A1B0GTR4 108 aa6.45□□□□□ -1.38
SHISA4-202ENST00000464117 KRTAP19-4Q3LI73 84 aa6.45□□□□□ -1.38
SHISA4-202ENST00000464117 KRTAP5-3Q6L8H2 238 aa6.43□□□□□ -1.38
SHISA4-202ENST00000464117 KRTAP12-4P60329 112 aa6.41□□□□□ -1.38
SHISA4-202ENST00000464117 KRTAP5-7Q6L8G8 165 aa6.38□□□□□ -1.39
SHISA4-202ENST00000464117 KRTAP23-1A1A580 65 aa6.36□□□□□ -1.39
SHISA4-202ENST00000464117 LOC100996750A0A140TA64 210 aa6.35□□□□□ -1.39
SHISA4-202ENST00000464117 V9GYY9 64 aa6.35□□□□□ -1.39
SHISA4-202ENST00000464117 PSPHP1O15172 72 aa6.3□□□□□ -1.4
SHISA4-202ENST00000464117 KRTAP15-1Q3LI76 137 aa6.29□□□□□ -1.4
SHISA4-202ENST00000464117 Q1T7F1 81 aa6.27□□□□□ -1.41
SHISA4-202ENST00000464117 SYNE1Q8NF91 8797 aaKnown RBP6.26□□□□□ -1.41
SHISA4-202ENST00000464117 LCE3CQ5T5A8 94 aa6.22□□□□□ -1.41
SHISA4-202ENST00000464117 A6NED7 52 aa6.1□□□□□ -1.43
SHISA4-202ENST00000464117 CDC42SE1Q9NRR8 79 aa6.1□□□□□ -1.43
SHISA4-202ENST00000464117 MT1AP04731 61 aa6.04□□□□□ -1.44
SHISA4-202ENST00000464117 KRTAP6-1Q3LI64 71 aa5.99□□□□□ -1.45
SHISA4-202ENST00000464117 ROMO1P60602 79 aa5.98□□□□□ -1.45
SHISA4-202ENST00000464117 KRTAP5-2Q701N4 177 aa5.98□□□□□ -1.45
SHISA4-202ENST00000464117 RPS28P62857 69 aaKnown RBP5.97□□□□□ -1.45
SHISA4-202ENST00000464117 KRTAP4-11Q9BYQ6 195 aa5.95□□□□□ -1.46
SHISA4-202ENST00000464117 KRTAP9-6A8MVA2 160 aa5.85□□□□□ -1.47
SHISA4-202ENST00000464117 KRTAP9-4Q9BYQ2 154 aa5.85□□□□□ -1.47
SHISA4-202ENST00000464117 KRTAP6-2Q3LI66 62 aa5.75□□□□□ -1.49
SHISA4-202ENST00000464117 KRTAP5-8O75690 187 aa5.74□□□□□ -1.49
SHISA4-202ENST00000464117 MUC5BQ9HC84 5762 aaPredicted RBP5.63□□□□□ -1.51
SHISA4-202ENST00000464117 AHNAKQ09666 5890 aaKnown RBP5.61□□□□□ -1.51
SHISA4-202ENST00000464117 MUC5ACP98088 5654 aa5.58□□□□□ -1.52
SHISA4-202ENST00000464117 OBSCNQ5VST9 7968 aa5.58□□□□□ -1.52
SHISA4-202ENST00000464117 MT3P25713 68 aa5.54□□□□□ -1.52
SHISA4-202ENST00000464117 KRTAP9-9Q9BYP9 154 aa5.49□□□□□ -1.53
SHISA4-202ENST00000464117 PCP4P48539 62 aa5.45□□□□□ -1.54
SHISA4-202ENST00000464117 KRTAP5-1Q6L8H4 278 aa5.38□□□□□ -1.55
SHISA4-202ENST00000464117 LCE1EQ5T753 118 aa5.13□□□□□ -1.59
SHISA4-202ENST00000464117 BRK1Q8WUW1 75 aa5.01□□□□□ -1.61
SHISA4-202ENST00000464117 KRTAP4-2Q9BYR5 136 aa4.83□□□□□ -1.64
SHISA4-202ENST00000464117 LCE1BQ5T7P3 118 aa4.8□□□□□ -1.64
SHISA4-202ENST00000464117 LCE1CQ5T751 118 aa4.76□□□□□ -1.65
SHISA4-202ENST00000464117 PMAIP1Q13794 54 aa4.7□□□□□ -1.66
SHISA4-202ENST00000464117 PRAC1Q96KF2 57 aa4.56□□□□□ -1.68
SHISA4-202ENST00000464117 LCE3DQ9BYE3 92 aa4.46□□□□□ -1.7
SHISA4-202ENST00000464117 KRTAP4-12Q9BQ66 201 aa4.4□□□□□ -1.71
SHISA4-202ENST00000464117 KRTAP5-11Q6L8G4 156 aa4.32□□□□□ -1.72
SHISA4-202ENST00000464117 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.32□□□□□ -1.72
SHISA4-202ENST00000464117 LCE1FQ5T754 118 aa4.26□□□□□ -1.73
SHISA4-202ENST00000464117 LCE3EQ5T5B0 92 aa4.17□□□□□ -1.74
SHISA4-202ENST00000464117 PRO0628Q9UI54 55 aa4.15□□□□□ -1.75
SHISA4-202ENST00000464117 KTN1-AS1Q86SY8 53 aa4.04□□□□□ -1.76
SHISA4-202ENST00000464117 KRTAP21-2Q3LI59 83 aa3.95□□□□□ -1.78
SHISA4-202ENST00000464117 LUZP6Q538Z0 58 aa3.95□□□□□ -1.78
SHISA4-202ENST00000464117 SVIPQ8NHG7 77 aa3.9□□□□□ -1.79
SHISA4-202ENST00000464117 PHGR1C9JFL3 82 aa3.85□□□□□ -1.79
SHISA4-202ENST00000464117 KRTAP4-4Q9BYR3 166 aa3.61□□□□□ -1.83
SHISA4-202ENST00000464117 MUC19Q7Z5P9 8384 aa3.44□□□□□ -1.86
SHISA4-202ENST00000464117 PRM1P04553 51 aa3.03□□□□□ -1.92
SHISA4-202ENST00000464117 KRTAP21-1Q3LI58 79 aa2.95□□□□□ -1.94
SHISA4-202ENST00000464117 NDUFAF8A1L188 74 aa2.88□□□□□ -1.95
SHISA4-202ENST00000464117 H3BS24 57 aa2.65□□□□□ -1.99
SHISA4-202ENST00000464117 MUC16Q8WXI7 14507 aa2.42□□□□□ -2.02
SHISA4-202ENST00000464117 A0A0A0MQY5 61 aa2.41□□□□□ -2.02
SHISA4-202ENST00000464117 INE1O15225 51 aa2.31□□□□□ -2.04
Retrieved 78 of 20,778 RNA–protein pairs in 50.5 ms