RNA–Protein interactions for RNA: ENST00000463822.1

RGPD6-207, Transcript of RANBP2-like and GRIP domain containing 6, humanhuman

TSL 1 (best)

Gene RGPD6, Length 6,902 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD6-207ENST00000463822 LCE3CQ5T5A8 94 aa1.62□□□□□ -2.15
RGPD6-207ENST00000463822 MACF1Q9UPN3 7388 aaKnown RBP1.61□□□□□ -2.15
RGPD6-207ENST00000463822 KRTAP9-6A0A140TA67 174 aa1.61□□□□□ -2.15
RGPD6-207ENST00000463822 SYNE2Q8WXH0 6885 aaKnown RBP1.6□□□□□ -2.15
RGPD6-207ENST00000463822 MT1LQ93083 61 aa1.6□□□□□ -2.15
RGPD6-207ENST00000463822 MT1GP13640 62 aa1.59□□□□□ -2.15
RGPD6-207ENST00000463822 SPRR5A0A1B0GTR4 108 aa1.59□□□□□ -2.15
RGPD6-207ENST00000463822 KRTAP19-3Q7Z4W3 81 aa1.59□□□□□ -2.16
RGPD6-207ENST00000463822 MUC12Q9UKN1 5478 aa1.58□□□□□ -2.16
RGPD6-207ENST00000463822 MDN1Q9NU22 5596 aa1.56□□□□□ -2.16
RGPD6-207ENST00000463822 SYNE1Q8NF91 8797 aaKnown RBP1.56□□□□□ -2.16
RGPD6-207ENST00000463822 SPRR2EP22531 72 aa1.56□□□□□ -2.16
RGPD6-207ENST00000463822 SPRR2BP35325 72 aa1.56□□□□□ -2.16
RGPD6-207ENST00000463822 SPRR2AP35326 72 aa1.56□□□□□ -2.16
RGPD6-207ENST00000463822 KRTAP4-7Q9BYR0 210 aa1.55□□□□□ -2.16
RGPD6-207ENST00000463822 LOC100996750A0A140TA64 210 aa1.55□□□□□ -2.16
RGPD6-207ENST00000463822 KRTAP4-6Q9BYQ5 205 aa1.55□□□□□ -2.16
RGPD6-207ENST00000463822 KRTAP9-1A8MXZ3 250 aaPredicted RBP1.54□□□□□ -2.16
RGPD6-207ENST00000463822 MT1MQ8N339 61 aa1.54□□□□□ -2.16
RGPD6-207ENST00000463822 LCE3BQ5TA77 95 aa1.54□□□□□ -2.16
RGPD6-207ENST00000463822 KRTAP6-3Q3LI67 103 aa1.53□□□□□ -2.16
RGPD6-207ENST00000463822 DSTQ03001 7570 aaKnown RBP1.51□□□□□ -2.17
RGPD6-207ENST00000463822 KRTAP5-9P26371 169 aa1.51□□□□□ -2.17
RGPD6-207ENST00000463822 SPRR2DP22532 72 aa1.51□□□□□ -2.17
RGPD6-207ENST00000463822 LCE5AQ5TCM9 118 aa1.5□□□□□ -2.17
RGPD6-207ENST00000463822 LCE1AQ5T7P2 110 aa1.49□□□□□ -2.17
RGPD6-207ENST00000463822 KRTAP4-3Q9BYR4 195 aa1.49□□□□□ -2.17
RGPD6-207ENST00000463822 KRTAP9-7A8MTY7 169 aa1.49□□□□□ -2.17
RGPD6-207ENST00000463822 NEBP20929 6669 aa1.48□□□□□ -2.17
RGPD6-207ENST00000463822 MUC5BQ9HC84 5762 aaPredicted RBP1.48□□□□□ -2.17
RGPD6-207ENST00000463822 KRTAP9-6A8MVA2 160 aa1.46□□□□□ -2.18
RGPD6-207ENST00000463822 GPR98Q8WXG9 6306 aa1.44□□□□□ -2.18
RGPD6-207ENST00000463822 MT1AP04731 61 aa1.39□□□□□ -2.19
RGPD6-207ENST00000463822 INE1O15225 51 aa1.38□□□□□ -2.19
RGPD6-207ENST00000463822 KRTAP2-3P0C7H8 128 aa1.37□□□□□ -2.19
RGPD6-207ENST00000463822 KRTAP2-4Q9BYR9 128 aa1.37□□□□□ -2.19
RGPD6-207ENST00000463822 KRTAP2-1Q9BYU5 128 aa1.37□□□□□ -2.19
RGPD6-207ENST00000463822 KRTAP12-4P60329 112 aa1.37□□□□□ -2.19
RGPD6-207ENST00000463822 AHNAK2Q8IVF2 5795 aa1.36□□□□□ -2.19
RGPD6-207ENST00000463822 KRTAP20-1Q3LI63 56 aa1.34□□□□□ -2.19
RGPD6-207ENST00000463822 KRTAP6-1Q3LI64 71 aa1.34□□□□□ -2.19
RGPD6-207ENST00000463822 KRTAP9-9Q9BYP9 154 aa1.34□□□□□ -2.2
RGPD6-207ENST00000463822 KRTAP2-2Q9BYT5 123 aa1.33□□□□□ -2.2
RGPD6-207ENST00000463822 MT4P47944 62 aa1.31□□□□□ -2.2
RGPD6-207ENST00000463822 MT3P25713 68 aa1.3□□□□□ -2.2
RGPD6-207ENST00000463822 LCE4AQ5TA78 99 aa1.3□□□□□ -2.2
RGPD6-207ENST00000463822 KRTAP5-5Q701N2 237 aaPredicted RBP1.29□□□□□ -2.2
RGPD6-207ENST00000463822 KRTAP9-4Q9BYQ2 154 aa1.29□□□□□ -2.2
RGPD6-207ENST00000463822 LCE3DQ9BYE3 92 aa1.27□□□□□ -2.21
RGPD6-207ENST00000463822 KRTAP4-9Q9BYQ8 210 aa1.26□□□□□ -2.21
RGPD6-207ENST00000463822 KRTAP6-2Q3LI66 62 aa1.25□□□□□ -2.21
RGPD6-207ENST00000463822 LCE3EQ5T5B0 92 aa1.25□□□□□ -2.21
RGPD6-207ENST00000463822 KRTAP5-4Q6L8H1 288 aa1.25□□□□□ -2.21
RGPD6-207ENST00000463822 AHNAKQ09666 5890 aaKnown RBP1.23□□□□□ -2.21
RGPD6-207ENST00000463822 LCE1DQ5T752 114 aa1.23□□□□□ -2.21
RGPD6-207ENST00000463822 KRTAP20-2Q3LI61 65 aa1.22□□□□□ -2.21
RGPD6-207ENST00000463822 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.22□□□□□ -2.21
RGPD6-207ENST00000463822 MUC5ACP98088 5654 aa1.21□□□□□ -2.22
RGPD6-207ENST00000463822 KRTAP5-3Q6L8H2 238 aa1.18□□□□□ -2.22
RGPD6-207ENST00000463822 KRTAP5-2Q701N4 177 aa1.17□□□□□ -2.22
RGPD6-207ENST00000463822 KRTAP4-2Q9BYR5 136 aa1.17□□□□□ -2.22
RGPD6-207ENST00000463822 KRTAP4-12Q9BQ66 201 aa1.11□□□□□ -2.23
RGPD6-207ENST00000463822 LCE1BQ5T7P3 118 aa1.09□□□□□ -2.23
RGPD6-207ENST00000463822 PRM1P04553 51 aa1.08□□□□□ -2.24
RGPD6-207ENST00000463822 KRTAP4-11Q9BYQ6 195 aa1.07□□□□□ -2.24
RGPD6-207ENST00000463822 LCE1EQ5T753 118 aa1.06□□□□□ -2.24
RGPD6-207ENST00000463822 KRTAP4-4Q9BYR3 166 aa1.03□□□□□ -2.24
RGPD6-207ENST00000463822 KRTAP5-8O75690 187 aa0.97□□□□□ -2.25
RGPD6-207ENST00000463822 KRTAP5-1Q6L8H4 278 aa0.97□□□□□ -2.25
RGPD6-207ENST00000463822 LCE1CQ5T751 118 aa0.96□□□□□ -2.26
RGPD6-207ENST00000463822 KRTAP5-10Q6L8G5 202 aa0.95□□□□□ -2.26
RGPD6-207ENST00000463822 KRTAP5-7Q6L8G8 165 aa0.92□□□□□ -2.26
RGPD6-207ENST00000463822 LCE1FQ5T754 118 aa0.89□□□□□ -2.27
RGPD6-207ENST00000463822 KRTAP5-11Q6L8G4 156 aa0.86□□□□□ -2.27
RGPD6-207ENST00000463822 KRTAP21-2Q3LI59 83 aa0.84□□□□□ -2.28
RGPD6-207ENST00000463822 PHGR1C9JFL3 82 aa0.71□□□□□ -2.3
RGPD6-207ENST00000463822 KRTAP21-1Q3LI58 79 aa0.6□□□□□ -2.31
RGPD6-207ENST00000463822 MUC16Q8WXI7 14507 aa0.41□□□□□ -2.34
Retrieved 78 of 20,778 RNA–protein pairs in 81.8 ms