RNA–Protein interactions for RNA: ENST00000463591.1

PRDM16-204, Transcript of PR/SET domain 16, humanhuman

TSL 5

Gene PRDM16, Length 384 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM16-204ENST00000463591 LINC01558Q9Y6Z2 57 aa7.21□□□□□ -1.26
PRDM16-204ENST00000463591 KRTAP9-9Q9BYP9 154 aa7.18□□□□□ -1.26
PRDM16-204ENST00000463591 KRTAP9-4Q9BYQ2 154 aa7.18□□□□□ -1.26
PRDM16-204ENST00000463591 LCE4AQ5TA78 99 aa7.14□□□□□ -1.27
PRDM16-204ENST00000463591 LCE1DQ5T752 114 aa7.11□□□□□ -1.27
PRDM16-204ENST00000463591 UQCR11O14957 56 aa7.07□□□□□ -1.28
PRDM16-204ENST00000463591 GPR98Q8WXG9 6306 aa7.07□□□□□ -1.28
PRDM16-204ENST00000463591 TMEM258P61165 79 aa7.05□□□□□ -1.28
PRDM16-204ENST00000463591 KRTAP4-3Q9BYR4 195 aa7.02□□□□□ -1.29
PRDM16-204ENST00000463591 MT4P47944 62 aa7□□□□□ -1.29
PRDM16-204ENST00000463591 KRTAP12-3P60328 96 aa6.98□□□□□ -1.29
PRDM16-204ENST00000463591 KRTAP5-4Q6L8H1 288 aa6.96□□□□□ -1.3
PRDM16-204ENST00000463591 HMCN1Q96RW7 5635 aa6.93□□□□□ -1.3
PRDM16-204ENST00000463591 KRTAP4-7Q9BYR0 210 aa6.89□□□□□ -1.31
PRDM16-204ENST00000463591 MIR22HGQ0VDD5 57 aa6.88□□□□□ -1.31
PRDM16-204ENST00000463591 KRTAP25-1Q3LHN0 102 aa6.86□□□□□ -1.31
PRDM16-204ENST00000463591 K7ERS5 55 aa6.81□□□□□ -1.32
PRDM16-204ENST00000463591 V9GYY9 64 aa6.75□□□□□ -1.33
PRDM16-204ENST00000463591 AHNAK2Q8IVF2 5795 aa6.72□□□□□ -1.33
PRDM16-204ENST00000463591 KRTAP19-4Q3LI73 84 aa6.7□□□□□ -1.34
PRDM16-204ENST00000463591 PSPHP1O15172 72 aa6.66□□□□□ -1.34
PRDM16-204ENST00000463591 Q1T7F1 81 aa6.66□□□□□ -1.34
PRDM16-204ENST00000463591 KRTAP5-5Q701N2 237 aaPredicted RBP6.65□□□□□ -1.34
PRDM16-204ENST00000463591 KRTAP23-1A1A580 65 aa6.64□□□□□ -1.35
PRDM16-204ENST00000463591 KRTAP5-10Q6L8G5 202 aa6.63□□□□□ -1.35
PRDM16-204ENST00000463591 KRTAP4-2Q9BYR5 136 aa6.59□□□□□ -1.35
PRDM16-204ENST00000463591 SPRR5A0A1B0GTR4 108 aa6.56□□□□□ -1.36
PRDM16-204ENST00000463591 KRTAP20-2Q3LI61 65 aa6.56□□□□□ -1.36
PRDM16-204ENST00000463591 KRTAP12-4P60329 112 aa6.54□□□□□ -1.36
PRDM16-204ENST00000463591 KRTAP15-1Q3LI76 137 aa6.52□□□□□ -1.37
PRDM16-204ENST00000463591 KRTAP5-3Q6L8H2 238 aa6.48□□□□□ -1.37
PRDM16-204ENST00000463591 A6NED7 52 aa6.45□□□□□ -1.38
PRDM16-204ENST00000463591 LCE3CQ5T5A8 94 aa6.43□□□□□ -1.38
PRDM16-204ENST00000463591 KRTAP5-7Q6L8G8 165 aa6.42□□□□□ -1.38
PRDM16-204ENST00000463591 SYNE1Q8NF91 8797 aaKnown RBP6.4□□□□□ -1.38
PRDM16-204ENST00000463591 KRTAP4-11Q9BYQ6 195 aa6.4□□□□□ -1.38
PRDM16-204ENST00000463591 CDC42SE1Q9NRR8 79 aa6.4□□□□□ -1.38
PRDM16-204ENST00000463591 ROMO1P60602 79 aa6.29□□□□□ -1.4
PRDM16-204ENST00000463591 RPS28P62857 69 aaKnown RBP6.24□□□□□ -1.41
PRDM16-204ENST00000463591 MT1AP04731 61 aa6.19□□□□□ -1.42
PRDM16-204ENST00000463591 KRTAP6-1Q3LI64 71 aa6.12□□□□□ -1.43
PRDM16-204ENST00000463591 KRTAP5-2Q701N4 177 aa6.08□□□□□ -1.44
PRDM16-204ENST00000463591 KRTAP9-6A8MVA2 160 aa6.02□□□□□ -1.45
PRDM16-204ENST00000463591 PCP4P48539 62 aa5.94□□□□□ -1.46
PRDM16-204ENST00000463591 KRTAP6-2Q3LI66 62 aa5.87□□□□□ -1.47
PRDM16-204ENST00000463591 KRTAP5-8O75690 187 aa5.81□□□□□ -1.48
PRDM16-204ENST00000463591 OBSCNQ5VST9 7968 aa5.71□□□□□ -1.5
PRDM16-204ENST00000463591 MT3P25713 68 aa5.69□□□□□ -1.5
PRDM16-204ENST00000463591 AHNAKQ09666 5890 aaKnown RBP5.51□□□□□ -1.53
PRDM16-204ENST00000463591 MUC5ACP98088 5654 aa5.51□□□□□ -1.53
PRDM16-204ENST00000463591 MUC5BQ9HC84 5762 aaPredicted RBP5.51□□□□□ -1.53
PRDM16-204ENST00000463591 KRTAP5-1Q6L8H4 278 aa5.47□□□□□ -1.53
PRDM16-204ENST00000463591 BRK1Q8WUW1 75 aa5.38□□□□□ -1.55
PRDM16-204ENST00000463591 H3BS24 57 aa5.34□□□□□ -1.55
PRDM16-204ENST00000463591 LCE1EQ5T753 118 aa5.25□□□□□ -1.57
PRDM16-204ENST00000463591 PMAIP1Q13794 54 aa5.08□□□□□ -1.6
PRDM16-204ENST00000463591 LCE1BQ5T7P3 118 aa4.9□□□□□ -1.63
PRDM16-204ENST00000463591 LCE1CQ5T751 118 aa4.87□□□□□ -1.63
PRDM16-204ENST00000463591 PRAC1Q96KF2 57 aa4.87□□□□□ -1.63
PRDM16-204ENST00000463591 LCE3DQ9BYE3 92 aa4.63□□□□□ -1.67
PRDM16-204ENST00000463591 PRO0628Q9UI54 55 aa4.56□□□□□ -1.68
PRDM16-204ENST00000463591 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.47□□□□□ -1.69
PRDM16-204ENST00000463591 KRTAP5-11Q6L8G4 156 aa4.4□□□□□ -1.71
PRDM16-204ENST00000463591 KTN1-AS1Q86SY8 53 aa4.4□□□□□ -1.71
PRDM16-204ENST00000463591 LCE3EQ5T5B0 92 aa4.35□□□□□ -1.71
PRDM16-204ENST00000463591 LCE1FQ5T754 118 aa4.34□□□□□ -1.71
PRDM16-204ENST00000463591 LUZP6Q538Z0 58 aa4.22□□□□□ -1.73
PRDM16-204ENST00000463591 SVIPQ8NHG7 77 aa4.22□□□□□ -1.73
PRDM16-204ENST00000463591 KRTAP21-2Q3LI59 83 aa4.04□□□□□ -1.76
PRDM16-204ENST00000463591 PHGR1C9JFL3 82 aa3.86□□□□□ -1.79
PRDM16-204ENST00000463591 KRTAP4-4Q9BYR3 166 aa3.73□□□□□ -1.81
PRDM16-204ENST00000463591 MUC19Q7Z5P9 8384 aa3.52□□□□□ -1.85
PRDM16-204ENST00000463591 PRM1P04553 51 aa3.18□□□□□ -1.9
PRDM16-204ENST00000463591 NDUFAF8A1L188 74 aa3.15□□□□□ -1.91
PRDM16-204ENST00000463591 KRTAP21-1Q3LI58 79 aa2.97□□□□□ -1.93
PRDM16-204ENST00000463591 A0A0A0MQY5 61 aa2.61□□□□□ -1.99
PRDM16-204ENST00000463591 INE1O15225 51 aa2.55□□□□□ -2
PRDM16-204ENST00000463591 MUC16Q8WXI7 14507 aa2.52□□□□□ -2.01
Retrieved 78 of 20,778 RNA–protein pairs in 59.3 ms