RNA–Protein interactions for RNA: ENST00000463244.6

CPSF7-209, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4

Gene CPSF7, Length 545 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-209ENST00000463244 TNP1P09430 55 aa6.9□□□□□ -1.3
CPSF7-209ENST00000463244 KRTAP5-5Q701N2 237 aaPredicted RBP6.88□□□□□ -1.31
CPSF7-209ENST00000463244 SERP2Q8N6R1 65 aa6.83□□□□□ -1.32
CPSF7-209ENST00000463244 SMIM26A0A096LP01 95 aa6.82□□□□□ -1.32
CPSF7-209ENST00000463244 KRTAP12-4P60329 112 aa6.79□□□□□ -1.32
CPSF7-209ENST00000463244 A8MU10 97 aa6.78□□□□□ -1.32
CPSF7-209ENST00000463244 KRTAP12-3P60328 96 aa6.78□□□□□ -1.32
CPSF7-209ENST00000463244 SYNE1Q8NF91 8797 aaKnown RBP6.75□□□□□ -1.33
CPSF7-209ENST00000463244 K7ERU9 68 aa6.73□□□□□ -1.33
CPSF7-209ENST00000463244 A0A1B0GU69 56 aa6.65□□□□□ -1.34
CPSF7-209ENST00000463244 LOC100996750A0A140TA64 210 aa6.61□□□□□ -1.35
CPSF7-209ENST00000463244 H7BZZ5 65 aa6.51□□□□□ -1.37
CPSF7-209ENST00000463244 KRTAP4-11Q9BYQ6 195 aa6.5□□□□□ -1.37
CPSF7-209ENST00000463244 COX7CP15954 63 aa6.45□□□□□ -1.38
CPSF7-209ENST00000463244 KRTAP5-2Q701N4 177 aa6.39□□□□□ -1.39
CPSF7-209ENST00000463244 KRTAP19-4Q3LI73 84 aa6.36□□□□□ -1.39
CPSF7-209ENST00000463244 MUC5BQ9HC84 5762 aaPredicted RBP6.31□□□□□ -1.4
CPSF7-209ENST00000463244 KRTAP5-8O75690 187 aa6.3□□□□□ -1.4
CPSF7-209ENST00000463244 PRR15LQ9BU68 103 aa6.3□□□□□ -1.4
CPSF7-209ENST00000463244 MUC5ACP98088 5654 aa6.3□□□□□ -1.4
CPSF7-209ENST00000463244 AHNAKQ09666 5890 aaKnown RBP6.29□□□□□ -1.4
CPSF7-209ENST00000463244 KRTAP25-1Q3LHN0 102 aa6.27□□□□□ -1.41
CPSF7-209ENST00000463244 KRTAP6-1Q3LI64 71 aa6.23□□□□□ -1.41
CPSF7-209ENST00000463244 MT1AP04731 61 aa6.22□□□□□ -1.41
CPSF7-209ENST00000463244 LCE3CQ5T5A8 94 aa6.19□□□□□ -1.42
CPSF7-209ENST00000463244 KRTAP15-1Q3LI76 137 aa6.15□□□□□ -1.42
CPSF7-209ENST00000463244 LINC01558Q9Y6Z2 57 aa6.13□□□□□ -1.43
CPSF7-209ENST00000463244 OBSCNQ5VST9 7968 aa6.11□□□□□ -1.43
CPSF7-209ENST00000463244 UQCR11O14957 56 aa6.08□□□□□ -1.44
CPSF7-209ENST00000463244 KRTAP9-4Q9BYQ2 154 aa6.07□□□□□ -1.44
CPSF7-209ENST00000463244 KRTAP6-2Q3LI66 62 aa6.04□□□□□ -1.44
CPSF7-209ENST00000463244 KRTAP9-9Q9BYP9 154 aa6.04□□□□□ -1.44
CPSF7-209ENST00000463244 KRTAP23-1A1A580 65 aa6.01□□□□□ -1.45
CPSF7-209ENST00000463244 ATP5EP56381 51 aaPredicted RBP5.94□□□□□ -1.46
CPSF7-209ENST00000463244 ANAPC13Q9BS18 74 aa5.92□□□□□ -1.46
CPSF7-209ENST00000463244 MIR22HGQ0VDD5 57 aa5.89□□□□□ -1.47
CPSF7-209ENST00000463244 KRTAP9-6A8MVA2 160 aa5.88□□□□□ -1.47
CPSF7-209ENST00000463244 K7ERS5 55 aa5.87□□□□□ -1.47
CPSF7-209ENST00000463244 CCDC179H3BU77 68 aa5.85□□□□□ -1.47
CPSF7-209ENST00000463244 KRTAP5-1Q6L8H4 278 aa5.82□□□□□ -1.48
CPSF7-209ENST00000463244 MT3P25713 68 aa5.71□□□□□ -1.5
CPSF7-209ENST00000463244 TMEM258P61165 79 aa5.58□□□□□ -1.52
CPSF7-209ENST00000463244 RPS28P62857 69 aaKnown RBP5.56□□□□□ -1.52
CPSF7-209ENST00000463244 CDC42SE1Q9NRR8 79 aa5.5□□□□□ -1.53
CPSF7-209ENST00000463244 PSPHP1O15172 72 aa5.49□□□□□ -1.53
CPSF7-209ENST00000463244 Q1T7F1 81 aa5.48□□□□□ -1.53
CPSF7-209ENST00000463244 V9GYY9 64 aa5.39□□□□□ -1.55
CPSF7-209ENST00000463244 ROMO1P60602 79 aa5.38□□□□□ -1.55
CPSF7-209ENST00000463244 LCE1EQ5T753 118 aa5.38□□□□□ -1.55
CPSF7-209ENST00000463244 A6NED7 52 aa5.26□□□□□ -1.57
CPSF7-209ENST00000463244 KRTAP4-2Q9BYR5 136 aa5.14□□□□□ -1.59
CPSF7-209ENST00000463244 LCE1BQ5T7P3 118 aa5.08□□□□□ -1.6
CPSF7-209ENST00000463244 LCE1CQ5T751 118 aa4.99□□□□□ -1.61
CPSF7-209ENST00000463244 KRTAP4-12Q9BQ66 201 aa4.82□□□□□ -1.64
CPSF7-209ENST00000463244 PCP4P48539 62 aa4.67□□□□□ -1.66
CPSF7-209ENST00000463244 KRTAP5-11Q6L8G4 156 aa4.6□□□□□ -1.67
CPSF7-209ENST00000463244 LCE1FQ5T754 118 aa4.56□□□□□ -1.68
CPSF7-209ENST00000463244 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.5□□□□□ -1.69
CPSF7-209ENST00000463244 LCE3DQ9BYE3 92 aa4.36□□□□□ -1.71
CPSF7-209ENST00000463244 PHGR1C9JFL3 82 aa4.35□□□□□ -1.71
CPSF7-209ENST00000463244 BRK1Q8WUW1 75 aa4.19□□□□□ -1.74
CPSF7-209ENST00000463244 KRTAP21-2Q3LI59 83 aa4.12□□□□□ -1.75
CPSF7-209ENST00000463244 LCE3EQ5T5B0 92 aa4.01□□□□□ -1.77
CPSF7-209ENST00000463244 SVIPQ8NHG7 77 aa3.92□□□□□ -1.78
CPSF7-209ENST00000463244 PMAIP1Q13794 54 aa3.9□□□□□ -1.79
CPSF7-209ENST00000463244 PRAC1Q96KF2 57 aa3.86□□□□□ -1.79
CPSF7-209ENST00000463244 KRTAP4-4Q9BYR3 166 aa3.83□□□□□ -1.8
CPSF7-209ENST00000463244 MUC19Q7Z5P9 8384 aa3.82□□□□□ -1.8
CPSF7-209ENST00000463244 PRO0628Q9UI54 55 aa3.69□□□□□ -1.82
CPSF7-209ENST00000463244 KTN1-AS1Q86SY8 53 aa3.42□□□□□ -1.86
CPSF7-209ENST00000463244 KRTAP21-1Q3LI58 79 aa3.31□□□□□ -1.88
CPSF7-209ENST00000463244 H3BS24 57 aa3.19□□□□□ -1.9
CPSF7-209ENST00000463244 LUZP6Q538Z0 58 aa3.16□□□□□ -1.9
CPSF7-209ENST00000463244 PRM1P04553 51 aa2.73□□□□□ -1.97
CPSF7-209ENST00000463244 A0A0A0MQY5 61 aa2.66□□□□□ -1.98
CPSF7-209ENST00000463244 MUC16Q8WXI7 14507 aa2.65□□□□□ -1.98
CPSF7-209ENST00000463244 NDUFAF8A1L188 74 aa2.61□□□□□ -1.99
CPSF7-209ENST00000463244 INE1O15225 51 aa2.27□□□□□ -2.05
Retrieved 78 of 20,778 RNA–protein pairs in 6 ms