RNA–Protein interactions for RNA: ENST00000463094.5

MSH5-210, Transcript of mutS homolog 5, humanhuman

TSL 2

Gene MSH5, Length 796 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-210ENST00000463094 K7ERS5 55 aa6.93□□□□□ -1.3
MSH5-210ENST00000463094 MIR22HGQ0VDD5 57 aa6.92□□□□□ -1.3
MSH5-210ENST00000463094 LCE4AQ5TA78 99 aa6.91□□□□□ -1.3
MSH5-210ENST00000463094 KRTAP12-3P60328 96 aa6.89□□□□□ -1.31
MSH5-210ENST00000463094 LCE1DQ5T752 114 aa6.88□□□□□ -1.31
MSH5-210ENST00000463094 MT4P47944 62 aa6.85□□□□□ -1.31
MSH5-210ENST00000463094 KRTAP4-3Q9BYR4 195 aa6.84□□□□□ -1.31
MSH5-210ENST00000463094 V9GYY9 64 aa6.83□□□□□ -1.32
MSH5-210ENST00000463094 KRTAP25-1Q3LHN0 102 aa6.82□□□□□ -1.32
MSH5-210ENST00000463094 PSPHP1O15172 72 aa6.75□□□□□ -1.33
MSH5-210ENST00000463094 GPR98Q8WXG9 6306 aa6.7□□□□□ -1.34
MSH5-210ENST00000463094 KRTAP5-4Q6L8H1 288 aa6.69□□□□□ -1.34
MSH5-210ENST00000463094 KRTAP4-7Q9BYR0 210 aa6.68□□□□□ -1.34
MSH5-210ENST00000463094 Q1T7F1 81 aa6.67□□□□□ -1.34
MSH5-210ENST00000463094 HMCN1Q96RW7 5635 aa6.61□□□□□ -1.35
MSH5-210ENST00000463094 A6NED7 52 aa6.58□□□□□ -1.36
MSH5-210ENST00000463094 KRTAP4-6Q9BYQ5 205 aa6.57□□□□□ -1.36
MSH5-210ENST00000463094 KRTAP19-4Q3LI73 84 aa6.54□□□□□ -1.36
MSH5-210ENST00000463094 KRTAP23-1A1A580 65 aa6.52□□□□□ -1.37
MSH5-210ENST00000463094 CDC42SE1Q9NRR8 79 aa6.48□□□□□ -1.37
MSH5-210ENST00000463094 KRTAP15-1Q3LI76 137 aa6.43□□□□□ -1.38
MSH5-210ENST00000463094 KRTAP12-4P60329 112 aa6.41□□□□□ -1.38
MSH5-210ENST00000463094 KRTAP5-5Q701N2 237 aaPredicted RBP6.4□□□□□ -1.38
MSH5-210ENST00000463094 KRTAP5-10Q6L8G5 202 aa6.36□□□□□ -1.39
MSH5-210ENST00000463094 SPRR5A0A1B0GTR4 108 aa6.35□□□□□ -1.39
MSH5-210ENST00000463094 KRTAP20-2Q3LI61 65 aa6.35□□□□□ -1.39
MSH5-210ENST00000463094 LOC100996750A0A140TA64 210 aa6.34□□□□□ -1.39
MSH5-210ENST00000463094 ROMO1P60602 79 aa6.32□□□□□ -1.4
MSH5-210ENST00000463094 LCE3CQ5T5A8 94 aa6.32□□□□□ -1.4
MSH5-210ENST00000463094 AHNAK2Q8IVF2 5795 aa6.31□□□□□ -1.4
MSH5-210ENST00000463094 RPS28P62857 69 aaKnown RBP6.3□□□□□ -1.4
MSH5-210ENST00000463094 KRTAP5-3Q6L8H2 238 aa6.24□□□□□ -1.41
MSH5-210ENST00000463094 KRTAP5-7Q6L8G8 165 aa6.14□□□□□ -1.43
MSH5-210ENST00000463094 PCP4P48539 62 aa6.13□□□□□ -1.43
MSH5-210ENST00000463094 MT1AP04731 61 aa6.03□□□□□ -1.44
MSH5-210ENST00000463094 SYNE1Q8NF91 8797 aaKnown RBP6.01□□□□□ -1.45
MSH5-210ENST00000463094 KRTAP6-1Q3LI64 71 aa5.96□□□□□ -1.46
MSH5-210ENST00000463094 KRTAP9-6A8MVA2 160 aa5.84□□□□□ -1.47
MSH5-210ENST00000463094 KRTAP5-2Q701N4 177 aa5.84□□□□□ -1.47
MSH5-210ENST00000463094 KRTAP9-4Q9BYQ2 154 aa5.83□□□□□ -1.48
MSH5-210ENST00000463094 KRTAP4-11Q9BYQ6 195 aa5.82□□□□□ -1.48
MSH5-210ENST00000463094 KRTAP6-2Q3LI66 62 aa5.73□□□□□ -1.49
MSH5-210ENST00000463094 KRTAP5-8O75690 187 aa5.58□□□□□ -1.52
MSH5-210ENST00000463094 BRK1Q8WUW1 75 aa5.58□□□□□ -1.52
MSH5-210ENST00000463094 MT3P25713 68 aa5.57□□□□□ -1.52
MSH5-210ENST00000463094 OBSCNQ5VST9 7968 aa5.42□□□□□ -1.54
MSH5-210ENST00000463094 KRTAP9-9Q9BYP9 154 aa5.41□□□□□ -1.54
MSH5-210ENST00000463094 MUC5ACP98088 5654 aa5.25□□□□□ -1.57
MSH5-210ENST00000463094 PMAIP1Q13794 54 aa5.25□□□□□ -1.57
MSH5-210ENST00000463094 KRTAP5-1Q6L8H4 278 aa5.24□□□□□ -1.57
MSH5-210ENST00000463094 MUC5BQ9HC84 5762 aaPredicted RBP5.18□□□□□ -1.58
MSH5-210ENST00000463094 AHNAKQ09666 5890 aaKnown RBP5.17□□□□□ -1.58
MSH5-210ENST00000463094 LCE1EQ5T753 118 aa5.08□□□□□ -1.6
MSH5-210ENST00000463094 PRAC1Q96KF2 57 aa4.99□□□□□ -1.61
MSH5-210ENST00000463094 LCE1BQ5T7P3 118 aa4.84□□□□□ -1.63
MSH5-210ENST00000463094 KRTAP4-2Q9BYR5 136 aa4.73□□□□□ -1.65
MSH5-210ENST00000463094 PRO0628Q9UI54 55 aa4.73□□□□□ -1.65
MSH5-210ENST00000463094 LCE1CQ5T751 118 aa4.7□□□□□ -1.66
MSH5-210ENST00000463094 H3BS24 57 aa4.59□□□□□ -1.67
MSH5-210ENST00000463094 LCE3DQ9BYE3 92 aa4.59□□□□□ -1.67
MSH5-210ENST00000463094 KTN1-AS1Q86SY8 53 aa4.57□□□□□ -1.68
MSH5-210ENST00000463094 SVIPQ8NHG7 77 aa4.51□□□□□ -1.69
MSH5-210ENST00000463094 KRTAP4-12Q9BQ66 201 aa4.45□□□□□ -1.7
MSH5-210ENST00000463094 LUZP6Q538Z0 58 aa4.42□□□□□ -1.7
MSH5-210ENST00000463094 LCE3EQ5T5B0 92 aa4.31□□□□□ -1.72
MSH5-210ENST00000463094 KRTAP5-11Q6L8G4 156 aa4.25□□□□□ -1.73
MSH5-210ENST00000463094 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.24□□□□□ -1.73
MSH5-210ENST00000463094 LCE1FQ5T754 118 aa4.18□□□□□ -1.74
MSH5-210ENST00000463094 KRTAP21-2Q3LI59 83 aa3.9□□□□□ -1.79
MSH5-210ENST00000463094 PHGR1C9JFL3 82 aa3.78□□□□□ -1.8
MSH5-210ENST00000463094 KRTAP4-4Q9BYR3 166 aa3.61□□□□□ -1.83
MSH5-210ENST00000463094 NDUFAF8A1L188 74 aa3.34□□□□□ -1.87
MSH5-210ENST00000463094 MUC19Q7Z5P9 8384 aa3.31□□□□□ -1.88
MSH5-210ENST00000463094 PRM1P04553 51 aa3.21□□□□□ -1.9
MSH5-210ENST00000463094 KRTAP21-1Q3LI58 79 aa2.88□□□□□ -1.95
MSH5-210ENST00000463094 A0A0A0MQY5 61 aa2.82□□□□□ -1.96
MSH5-210ENST00000463094 INE1O15225 51 aa2.69□□□□□ -1.98
MSH5-210ENST00000463094 MUC16Q8WXI7 14507 aa2.36□□□□□ -2.03
Retrieved 78 of 20,778 RNA–protein pairs in 112.7 ms