RNA–Protein interactions for RNA: ENST00000462658.1

UBE4B-204, Transcript of ubiquitination factor E4B, humanhuman

TSL 3

Gene UBE4B, Length 573 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-204ENST00000462658 SPATA8Q6RVD6 105 aa3.31□□□□□ -1.88
UBE4B-204ENST00000462658 M0QZ58 72 aa3.3□□□□□ -1.88
UBE4B-204ENST00000462658 MT2AP02795 61 aa3.3□□□□□ -1.88
UBE4B-204ENST00000462658 KRTAP10-10P60014 251 aa3.3□□□□□ -1.88
UBE4B-204ENST00000462658 KRTAP13-4Q3LI77 160 aa3.3□□□□□ -1.88
UBE4B-204ENST00000462658 R4GN34 69 aa3.3□□□□□ -1.88
UBE4B-204ENST00000462658 MT1FP04733 61 aa3.28□□□□□ -1.88
UBE4B-204ENST00000462658 CRIPTQ9P021 101 aa3.28□□□□□ -1.88
UBE4B-204ENST00000462658 KRTAP5-2Q701N4 177 aa3.26□□□□□ -1.89
UBE4B-204ENST00000462658 CRCT1Q9UGL9 99 aa3.26□□□□□ -1.89
UBE4B-204ENST00000462658 A0A0D9SG42 100 aa3.25□□□□□ -1.89
UBE4B-204ENST00000462658 ROMO1P60602 79 aa3.25□□□□□ -1.89
UBE4B-204ENST00000462658 FCGBPQ9Y6R7 5405 aaPredicted RBP3.24□□□□□ -1.89
UBE4B-204ENST00000462658 LCE1CQ5T751 118 aa3.22□□□□□ -1.89
UBE4B-204ENST00000462658 LCE1BQ5T7P3 118 aa3.22□□□□□ -1.89
UBE4B-204ENST00000462658 SPRR2GQ9BYE4 73 aa3.21□□□□□ -1.9
UBE4B-204ENST00000462658 KRTAP25-1Q3LHN0 102 aa3.2□□□□□ -1.9
UBE4B-204ENST00000462658 SPINT4Q6UDR6 99 aa3.19□□□□□ -1.9
UBE4B-204ENST00000462658 K7ERS5 55 aa3.18□□□□□ -1.9
UBE4B-204ENST00000462658 KRTAP12-1P59990 96 aa3.18□□□□□ -1.9
UBE4B-204ENST00000462658 KRTAP19-8Q3LI54 63 aa3.14□□□□□ -1.91
UBE4B-204ENST00000462658 PLAC4Q8WY50 150 aa3.12□□□□□ -1.91
UBE4B-204ENST00000462658 SYNE2Q8WXH0 6885 aaKnown RBP3.11□□□□□ -1.91
UBE4B-204ENST00000462658 MT1BP07438 61 aa3.09□□□□□ -1.91
UBE4B-204ENST00000462658 MACF1Q9UPN3 7388 aaKnown RBP3.08□□□□□ -1.92
UBE4B-204ENST00000462658 KRTAP19-6Q3LI70 58 aa3.03□□□□□ -1.92
UBE4B-204ENST00000462658 C10orf95Q9H7T3 257 aa3.01□□□□□ -1.93
UBE4B-204ENST00000462658 MUC12Q9UKN1 5478 aa2.98□□□□□ -1.93
UBE4B-204ENST00000462658 MT1XP80297 61 aa2.98□□□□□ -1.93
UBE4B-204ENST00000462658 PRO2289Q9P1D8 64 aa2.97□□□□□ -1.93
UBE4B-204ENST00000462658 NEBP20929 6669 aa2.96□□□□□ -1.94
UBE4B-204ENST00000462658 LUZP6Q538Z0 58 aa2.96□□□□□ -1.94
UBE4B-204ENST00000462658 KMT2DO14686 5537 aa2.95□□□□□ -1.94
UBE4B-204ENST00000462658 TNP1P09430 55 aa2.93□□□□□ -1.94
UBE4B-204ENST00000462658 MDN1Q9NU22 5596 aa2.89□□□□□ -1.95
UBE4B-204ENST00000462658 KRTAP6-3Q3LI67 103 aa2.84□□□□□ -1.95
UBE4B-204ENST00000462658 KRTAP8-1Q8IUC2 63 aa2.74□□□□□ -1.97
UBE4B-204ENST00000462658 KRTAP5-8O75690 187 aa2.73□□□□□ -1.97
UBE4B-204ENST00000462658 KRTAP12-3P60328 96 aa2.7□□□□□ -1.98
UBE4B-204ENST00000462658 KRTAP19-5Q3LI72 72 aa2.7□□□□□ -1.98
UBE4B-204ENST00000462658 KRTAP5-7Q6L8G8 165 aa2.7□□□□□ -1.98
UBE4B-204ENST00000462658 KRTAP19-7Q3SYF9 63 aa2.66□□□□□ -1.98
UBE4B-204ENST00000462658 MT1EP04732 61 aa2.62□□□□□ -1.99
UBE4B-204ENST00000462658 SPRR2FQ96RM1 72 aa2.62□□□□□ -1.99
UBE4B-204ENST00000462658 KRTAP20-1Q3LI63 56 aa2.6□□□□□ -1.99
UBE4B-204ENST00000462658 INE1O15225 51 aa2.57□□□□□ -2
UBE4B-204ENST00000462658 SPRR2EP22531 72 aa2.57□□□□□ -2
UBE4B-204ENST00000462658 SPRR2BP35325 72 aa2.57□□□□□ -2
UBE4B-204ENST00000462658 SPRR2AP35326 72 aa2.57□□□□□ -2
UBE4B-204ENST00000462658 MT1LQ93083 61 aa2.57□□□□□ -2
UBE4B-204ENST00000462658 KRTAP12-4P60329 112 aa2.56□□□□□ -2
UBE4B-204ENST00000462658 MUC19Q7Z5P9 8384 aa2.56□□□□□ -2
UBE4B-204ENST00000462658 KRTAP2-3P0C7H8 128 aa2.53□□□□□ -2
UBE4B-204ENST00000462658 KRTAP19-3Q7Z4W3 81 aa2.53□□□□□ -2
UBE4B-204ENST00000462658 KRTAP2-4Q9BYR9 128 aa2.53□□□□□ -2
UBE4B-204ENST00000462658 MT1GP13640 62 aa2.51□□□□□ -2.01
UBE4B-204ENST00000462658 SPRR2DP22532 72 aa2.48□□□□□ -2.01
UBE4B-204ENST00000462658 MT1MQ8N339 61 aa2.47□□□□□ -2.01
UBE4B-204ENST00000462658 KRTAP2-1Q9BYU5 128 aa2.45□□□□□ -2.02
UBE4B-204ENST00000462658 DSTQ03001 7570 aaKnown RBP2.44□□□□□ -2.02
UBE4B-204ENST00000462658 GPR98Q8WXG9 6306 aa2.37□□□□□ -2.03
UBE4B-204ENST00000462658 HMCN1Q96RW7 5635 aa2.33□□□□□ -2.04
UBE4B-204ENST00000462658 KRTAP21-2Q3LI59 83 aa2.3□□□□□ -2.04
UBE4B-204ENST00000462658 AHNAK2Q8IVF2 5795 aa2.29□□□□□ -2.04
UBE4B-204ENST00000462658 SYNE1Q8NF91 8797 aaKnown RBP2.21□□□□□ -2.06
UBE4B-204ENST00000462658 MT4P47944 62 aa2.2□□□□□ -2.06
UBE4B-204ENST00000462658 MT1AP04731 61 aa2.18□□□□□ -2.06
UBE4B-204ENST00000462658 KRTAP6-1Q3LI64 71 aa2.16□□□□□ -2.06
UBE4B-204ENST00000462658 KRTAP5-10Q6L8G5 202 aa2.11□□□□□ -2.07
UBE4B-204ENST00000462658 KRTAP20-2Q3LI61 65 aa2.09□□□□□ -2.07
UBE4B-204ENST00000462658 KRTAP6-2Q3LI66 62 aa2□□□□□ -2.09
UBE4B-204ENST00000462658 MUC5ACP98088 5654 aa1.9□□□□□ -2.11
UBE4B-204ENST00000462658 AHNAKQ09666 5890 aaKnown RBP1.88□□□□□ -2.11
UBE4B-204ENST00000462658 MUC5BQ9HC84 5762 aaPredicted RBP1.88□□□□□ -2.11
UBE4B-204ENST00000462658 PRM1P04553 51 aa1.57□□□□□ -2.16
UBE4B-204ENST00000462658 MUC16Q8WXI7 14507 aa1.28□□□□□ -2.2
UBE4B-204ENST00000462658 PHGR1C9JFL3 82 aa1.22□□□□□ -2.21
UBE4B-204ENST00000462658 KRTAP21-1Q3LI58 79 aa1.09□□□□□ -2.23
Retrieved 78 of 20,778 RNA–protein pairs in 172.1 ms