RNA–Protein interactions for RNA: ENST00000462625.1

LIMK2-206, Transcript of LIM domain kinase 2, humanhuman

TSL 2

Gene LIMK2, Length 1,042 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK2-206ENST00000462625 PP632Q6XCG6 107 aa8.35□□□□□ -1.07
LIMK2-206ENST00000462625 DSTQ03001 7570 aaKnown RBP8.28□□□□□ -1.08
LIMK2-206ENST00000462625 MT1LQ93083 61 aa8.25□□□□□ -1.09
LIMK2-206ENST00000462625 KRTAP25-1Q3LHN0 102 aa8.18□□□□□ -1.1
LIMK2-206ENST00000462625 MT1MQ8N339 61 aa8.18□□□□□ -1.1
LIMK2-206ENST00000462625 A6NED7 52 aa8.14□□□□□ -1.11
LIMK2-206ENST00000462625 KRTAP12-3P60328 96 aa8.12□□□□□ -1.11
LIMK2-206ENST00000462625 PCP4P48539 62 aa8.09□□□□□ -1.11
LIMK2-206ENST00000462625 RPS28P62857 69 aaKnown RBP8.09□□□□□ -1.11
LIMK2-206ENST00000462625 KRTAP4-3Q9BYR4 195 aa7.94□□□□□ -1.14
LIMK2-206ENST00000462625 KRTAP4-9Q9BYQ8 210 aa7.92□□□□□ -1.14
LIMK2-206ENST00000462625 KRTAP23-1A1A580 65 aa7.89□□□□□ -1.15
LIMK2-206ENST00000462625 CDC42SE1Q9NRR8 79 aa7.89□□□□□ -1.15
LIMK2-206ENST00000462625 LCE4AQ5TA78 99 aa7.86□□□□□ -1.15
LIMK2-206ENST00000462625 KRTAP4-7Q9BYR0 210 aa7.81□□□□□ -1.16
LIMK2-206ENST00000462625 LCE1DQ5T752 114 aa7.77□□□□□ -1.17
LIMK2-206ENST00000462625 ROMO1P60602 79 aa7.75□□□□□ -1.17
LIMK2-206ENST00000462625 KRTAP19-4Q3LI73 84 aa7.75□□□□□ -1.17
LIMK2-206ENST00000462625 MT4P47944 62 aa7.72□□□□□ -1.17
LIMK2-206ENST00000462625 KRTAP5-4Q6L8H1 288 aa7.69□□□□□ -1.18
LIMK2-206ENST00000462625 KRTAP15-1Q3LI76 137 aa7.66□□□□□ -1.18
LIMK2-206ENST00000462625 HMCN1Q96RW7 5635 aa7.57□□□□□ -1.2
LIMK2-206ENST00000462625 LCE3CQ5T5A8 94 aa7.5□□□□□ -1.21
LIMK2-206ENST00000462625 KRTAP4-6Q9BYQ5 205 aa7.48□□□□□ -1.21
LIMK2-206ENST00000462625 GPR98Q8WXG9 6306 aa7.47□□□□□ -1.21
LIMK2-206ENST00000462625 KRTAP5-5Q701N2 237 aaPredicted RBP7.45□□□□□ -1.22
LIMK2-206ENST00000462625 LOC100996750A0A140TA64 210 aa7.4□□□□□ -1.22
LIMK2-206ENST00000462625 KRTAP12-4P60329 112 aa7.32□□□□□ -1.24
LIMK2-206ENST00000462625 SPRR5A0A1B0GTR4 108 aa7.28□□□□□ -1.24
LIMK2-206ENST00000462625 KRTAP20-2Q3LI61 65 aa7.26□□□□□ -1.25
LIMK2-206ENST00000462625 AHNAK2Q8IVF2 5795 aa7.24□□□□□ -1.25
LIMK2-206ENST00000462625 BRK1Q8WUW1 75 aa7.14□□□□□ -1.27
LIMK2-206ENST00000462625 KRTAP5-10Q6L8G5 202 aa7.11□□□□□ -1.27
LIMK2-206ENST00000462625 SYNE1Q8NF91 8797 aaKnown RBP7.1□□□□□ -1.27
LIMK2-206ENST00000462625 MT1AP04731 61 aa7.04□□□□□ -1.28
LIMK2-206ENST00000462625 KRTAP5-3Q6L8H2 238 aa7.01□□□□□ -1.29
LIMK2-206ENST00000462625 KRTAP9-6A8MVA2 160 aa6.98□□□□□ -1.29
LIMK2-206ENST00000462625 KRTAP6-1Q3LI64 71 aa6.96□□□□□ -1.3
LIMK2-206ENST00000462625 KRTAP5-7Q6L8G8 165 aa6.83□□□□□ -1.32
LIMK2-206ENST00000462625 KRTAP9-4Q9BYQ2 154 aa6.79□□□□□ -1.32
LIMK2-206ENST00000462625 KRTAP5-2Q701N4 177 aa6.76□□□□□ -1.33
LIMK2-206ENST00000462625 PMAIP1Q13794 54 aa6.73□□□□□ -1.33
LIMK2-206ENST00000462625 KRTAP6-2Q3LI66 62 aa6.63□□□□□ -1.35
LIMK2-206ENST00000462625 KRTAP4-11Q9BYQ6 195 aa6.59□□□□□ -1.35
LIMK2-206ENST00000462625 MT3P25713 68 aa6.47□□□□□ -1.37
LIMK2-206ENST00000462625 PRAC1Q96KF2 57 aa6.38□□□□□ -1.39
LIMK2-206ENST00000462625 KRTAP5-8O75690 187 aa6.34□□□□□ -1.39
LIMK2-206ENST00000462625 OBSCNQ5VST9 7968 aa6.32□□□□□ -1.4
LIMK2-206ENST00000462625 PRO0628Q9UI54 55 aa6.31□□□□□ -1.4
LIMK2-206ENST00000462625 KRTAP9-9Q9BYP9 154 aa6.06□□□□□ -1.44
LIMK2-206ENST00000462625 KRTAP5-1Q6L8H4 278 aa6.02□□□□□ -1.45
LIMK2-206ENST00000462625 KTN1-AS1Q86SY8 53 aa6.02□□□□□ -1.45
LIMK2-206ENST00000462625 MUC5ACP98088 5654 aa5.92□□□□□ -1.46
LIMK2-206ENST00000462625 LCE1EQ5T753 118 aa5.89□□□□□ -1.47
LIMK2-206ENST00000462625 MUC5BQ9HC84 5762 aaPredicted RBP5.88□□□□□ -1.47
LIMK2-206ENST00000462625 AHNAKQ09666 5890 aaKnown RBP5.88□□□□□ -1.47
LIMK2-206ENST00000462625 SVIPQ8NHG7 77 aa5.8□□□□□ -1.48
LIMK2-206ENST00000462625 LCE1BQ5T7P3 118 aa5.53□□□□□ -1.52
LIMK2-206ENST00000462625 LUZP6Q538Z0 58 aa5.51□□□□□ -1.53
LIMK2-206ENST00000462625 KRTAP4-2Q9BYR5 136 aa5.48□□□□□ -1.53
LIMK2-206ENST00000462625 LCE3DQ9BYE3 92 aa5.46□□□□□ -1.54
LIMK2-206ENST00000462625 LCE1CQ5T751 118 aa5.45□□□□□ -1.54
LIMK2-206ENST00000462625 LCE3EQ5T5B0 92 aa5.17□□□□□ -1.58
LIMK2-206ENST00000462625 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.96□□□□□ -1.62
LIMK2-206ENST00000462625 KRTAP4-12Q9BQ66 201 aa4.93□□□□□ -1.62
LIMK2-206ENST00000462625 KRTAP5-11Q6L8G4 156 aa4.91□□□□□ -1.62
LIMK2-206ENST00000462625 LCE1FQ5T754 118 aa4.78□□□□□ -1.64
LIMK2-206ENST00000462625 KRTAP21-2Q3LI59 83 aa4.57□□□□□ -1.68
LIMK2-206ENST00000462625 NDUFAF8A1L188 74 aa4.43□□□□□ -1.7
LIMK2-206ENST00000462625 PHGR1C9JFL3 82 aa4.24□□□□□ -1.73
LIMK2-206ENST00000462625 KRTAP4-4Q9BYR3 166 aa4.16□□□□□ -1.74
LIMK2-206ENST00000462625 PRM1P04553 51 aa3.95□□□□□ -1.78
LIMK2-206ENST00000462625 MUC19Q7Z5P9 8384 aa3.87□□□□□ -1.79
LIMK2-206ENST00000462625 INE1O15225 51 aa3.63□□□□□ -1.83
LIMK2-206ENST00000462625 A0A0A0MQY5 61 aa3.61□□□□□ -1.83
LIMK2-206ENST00000462625 KRTAP21-1Q3LI58 79 aa3.18□□□□□ -1.9
LIMK2-206ENST00000462625 H3BS24 57 aa2.93□□□□□ -1.94
LIMK2-206ENST00000462625 MUC16Q8WXI7 14507 aa2.8□□□□□ -1.96
Retrieved 78 of 20,778 RNA–protein pairs in 61.1 ms