RNA–Protein interactions for RNA: ENST00000462539.1

SREBF2-204, Transcript of sterol regulatory element binding transcription factor 2, humanhuman

TSL 2

Gene SREBF2, Length 796 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF2-204ENST00000462539 KRTAP10-5P60370 271 aa2.95□□□□□ -1.94
SREBF2-204ENST00000462539 MT1XP80297 61 aa2.95□□□□□ -1.94
SREBF2-204ENST00000462539 KRTAP10-12P60413 245 aa2.91□□□□□ -1.94
SREBF2-204ENST00000462539 KRTAP12-3P60328 96 aa2.88□□□□□ -1.95
SREBF2-204ENST00000462539 KRTAP10-7P60409 375 aaPredicted RBP2.86□□□□□ -1.95
SREBF2-204ENST00000462539 LCE1AQ5T7P2 110 aa2.8□□□□□ -1.96
SREBF2-204ENST00000462539 PRO2289Q9P1D8 64 aa2.8□□□□□ -1.96
SREBF2-204ENST00000462539 MT3P25713 68 aa2.79□□□□□ -1.96
SREBF2-204ENST00000462539 SYNE2Q8WXH0 6885 aaKnown RBP2.77□□□□□ -1.97
SREBF2-204ENST00000462539 INE1O15225 51 aa2.77□□□□□ -1.97
SREBF2-204ENST00000462539 MACF1Q9UPN3 7388 aaKnown RBP2.76□□□□□ -1.97
SREBF2-204ENST00000462539 KRTAP19-5Q3LI72 72 aa2.76□□□□□ -1.97
SREBF2-204ENST00000462539 KRTAP20-1Q3LI63 56 aa2.75□□□□□ -1.97
SREBF2-204ENST00000462539 LCE3CQ5T5A8 94 aa2.72□□□□□ -1.97
SREBF2-204ENST00000462539 KRTAP6-3Q3LI67 103 aa2.71□□□□□ -1.98
SREBF2-204ENST00000462539 SSPOA2VEC9 5147 aa2.66□□□□□ -1.98
SREBF2-204ENST00000462539 FCGBPQ9Y6R7 5405 aaPredicted RBP2.65□□□□□ -1.98
SREBF2-204ENST00000462539 KRTAP9-6A8MVA2 160 aa2.62□□□□□ -1.99
SREBF2-204ENST00000462539 KRTAP19-7Q3SYF9 63 aa2.62□□□□□ -1.99
SREBF2-204ENST00000462539 USH2AO75445 5202 aa2.61□□□□□ -1.99
SREBF2-204ENST00000462539 NEBP20929 6669 aa2.6□□□□□ -1.99
SREBF2-204ENST00000462539 KRTAP2-3P0C7H8 128 aa2.57□□□□□ -2
SREBF2-204ENST00000462539 MT1LQ93083 61 aa2.57□□□□□ -2
SREBF2-204ENST00000462539 KRTAP2-4Q9BYR9 128 aa2.57□□□□□ -2
SREBF2-204ENST00000462539 KRTAP2-1Q9BYU5 128 aa2.57□□□□□ -2
SREBF2-204ENST00000462539 MT1EP04732 61 aa2.56□□□□□ -2
SREBF2-204ENST00000462539 LCE1FQ5T754 118 aa2.55□□□□□ -2
SREBF2-204ENST00000462539 KRTAP2-2Q9BYT5 123 aa2.54□□□□□ -2
SREBF2-204ENST00000462539 KRTAP19-6Q3LI70 58 aa2.53□□□□□ -2
SREBF2-204ENST00000462539 MUC12Q9UKN1 5478 aa2.47□□□□□ -2.01
SREBF2-204ENST00000462539 KMT2DO14686 5537 aa2.45□□□□□ -2.02
SREBF2-204ENST00000462539 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.44□□□□□ -2.02
SREBF2-204ENST00000462539 MT1MQ8N339 61 aa2.4□□□□□ -2.03
SREBF2-204ENST00000462539 GPR98Q8WXG9 6306 aa2.4□□□□□ -2.03
SREBF2-204ENST00000462539 KRTAP4-3Q9BYR4 195 aa2.39□□□□□ -2.03
SREBF2-204ENST00000462539 SPRR2EP22531 72 aa2.37□□□□□ -2.03
SREBF2-204ENST00000462539 KRTAP5-9P26371 169 aa2.37□□□□□ -2.03
SREBF2-204ENST00000462539 SPRR2BP35325 72 aa2.37□□□□□ -2.03
SREBF2-204ENST00000462539 SPRR2AP35326 72 aa2.37□□□□□ -2.03
SREBF2-204ENST00000462539 KRTAP19-3Q7Z4W3 81 aa2.37□□□□□ -2.03
SREBF2-204ENST00000462539 MT1GP13640 62 aa2.36□□□□□ -2.03
SREBF2-204ENST00000462539 KRTAP5-11Q6L8G4 156 aa2.35□□□□□ -2.03
SREBF2-204ENST00000462539 SPRR2DP22532 72 aa2.3□□□□□ -2.04
SREBF2-204ENST00000462539 MDN1Q9NU22 5596 aa2.29□□□□□ -2.04
SREBF2-204ENST00000462539 SPRR2FQ96RM1 72 aa2.29□□□□□ -2.04
SREBF2-204ENST00000462539 LCE1EQ5T753 118 aa2.23□□□□□ -2.05
SREBF2-204ENST00000462539 KRTAP12-4P60329 112 aa2.22□□□□□ -2.05
SREBF2-204ENST00000462539 MT1AP04731 61 aa2.17□□□□□ -2.06
SREBF2-204ENST00000462539 KRTAP6-1Q3LI64 71 aa2.17□□□□□ -2.06
SREBF2-204ENST00000462539 LCE3EQ5T5B0 92 aa2.17□□□□□ -2.06
SREBF2-204ENST00000462539 DSTQ03001 7570 aaKnown RBP2.17□□□□□ -2.06
SREBF2-204ENST00000462539 KRTAP5-5Q701N2 237 aaPredicted RBP2.12□□□□□ -2.07
SREBF2-204ENST00000462539 KRTAP5-10Q6L8G5 202 aa2.09□□□□□ -2.07
SREBF2-204ENST00000462539 KRTAP5-7Q6L8G8 165 aa2.09□□□□□ -2.07
SREBF2-204ENST00000462539 KRTAP5-1Q6L8H4 278 aa2.09□□□□□ -2.07
SREBF2-204ENST00000462539 LCE3DQ9BYE3 92 aa2.08□□□□□ -2.08
SREBF2-204ENST00000462539 MT4P47944 62 aa2.04□□□□□ -2.08
SREBF2-204ENST00000462539 KRTAP5-4Q6L8H1 288 aa2.04□□□□□ -2.08
SREBF2-204ENST00000462539 AHNAK2Q8IVF2 5795 aa2.04□□□□□ -2.08
SREBF2-204ENST00000462539 SYNE1Q8NF91 8797 aaKnown RBP2.01□□□□□ -2.09
SREBF2-204ENST00000462539 PRM1P04553 51 aa2.01□□□□□ -2.09
SREBF2-204ENST00000462539 KRTAP4-4Q9BYR3 166 aa2.01□□□□□ -2.09
SREBF2-204ENST00000462539 KRTAP6-2Q3LI66 62 aa1.95□□□□□ -2.1
SREBF2-204ENST00000462539 HMCN1Q96RW7 5635 aa1.95□□□□□ -2.1
SREBF2-204ENST00000462539 OBSCNQ5VST9 7968 aa1.9□□□□□ -2.11
SREBF2-204ENST00000462539 AHNAKQ09666 5890 aaKnown RBP1.81□□□□□ -2.12
SREBF2-204ENST00000462539 KRTAP20-2Q3LI61 65 aa1.75□□□□□ -2.13
SREBF2-204ENST00000462539 KRTAP5-2Q701N4 177 aa1.74□□□□□ -2.13
SREBF2-204ENST00000462539 MUC5ACP98088 5654 aa1.73□□□□□ -2.13
SREBF2-204ENST00000462539 MUC5BQ9HC84 5762 aaPredicted RBP1.68□□□□□ -2.14
SREBF2-204ENST00000462539 KRTAP5-8O75690 187 aa1.68□□□□□ -2.14
SREBF2-204ENST00000462539 LCE1BQ5T7P3 118 aa1.51□□□□□ -2.17
SREBF2-204ENST00000462539 LCE1CQ5T751 118 aa1.47□□□□□ -2.17
SREBF2-204ENST00000462539 KRTAP21-2Q3LI59 83 aa1.4□□□□□ -2.19
SREBF2-204ENST00000462539 PHGR1C9JFL3 82 aa1.31□□□□□ -2.2
SREBF2-204ENST00000462539 MUC19Q7Z5P9 8384 aa1.3□□□□□ -2.2
SREBF2-204ENST00000462539 KRTAP21-1Q3LI58 79 aa1.29□□□□□ -2.2
SREBF2-204ENST00000462539 MUC16Q8WXI7 14507 aa0.84□□□□□ -2.27
Retrieved 78 of 20,778 RNA–protein pairs in 113 ms