RNA–Protein interactions for RNA: ENST00000462257.1

SH3D19-205, Transcript of SH3 domain containing 19, humanhuman

TSL 2

Gene SH3D19, Length 882 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3D19-205ENST00000462257 R4GN34 69 aa3.01□□□□□ -1.93
SH3D19-205ENST00000462257 CCDC179H3BU77 68 aa3□□□□□ -1.93
SH3D19-205ENST00000462257 M0QZ58 72 aa2.98□□□□□ -1.93
SH3D19-205ENST00000462257 LCE3EQ5T5B0 92 aa2.98□□□□□ -1.93
SH3D19-205ENST00000462257 ATP5EP56381 51 aaPredicted RBP2.97□□□□□ -1.93
SH3D19-205ENST00000462257 KRTAP12-2P59991 146 aa2.96□□□□□ -1.94
SH3D19-205ENST00000462257 PLAC4Q8WY50 150 aa2.95□□□□□ -1.94
SH3D19-205ENST00000462257 SERP1Q9Y6X1 66 aa2.95□□□□□ -1.94
SH3D19-205ENST00000462257 CAMK2N1Q7Z7J9 78 aa2.94□□□□□ -1.94
SH3D19-205ENST00000462257 TMEM258P61165 79 aa2.93□□□□□ -1.94
SH3D19-205ENST00000462257 MT1XP80297 61 aa2.92□□□□□ -1.94
SH3D19-205ENST00000462257 LINC01554Q52M75 96 aa2.92□□□□□ -1.94
SH3D19-205ENST00000462257 GPR98Q8WXG9 6306 aa2.91□□□□□ -1.94
SH3D19-205ENST00000462257 SMIM26A0A096LP01 95 aa2.89□□□□□ -1.95
SH3D19-205ENST00000462257 A0A1B0GU33 70 aa2.88□□□□□ -1.95
SH3D19-205ENST00000462257 A0A1B0GU69 56 aa2.88□□□□□ -1.95
SH3D19-205ENST00000462257 PRR15LQ9BU68 103 aa2.86□□□□□ -1.95
SH3D19-205ENST00000462257 PSPHP1O15172 72 aa2.85□□□□□ -1.95
SH3D19-205ENST00000462257 KRTAP5-8O75690 187 aa2.85□□□□□ -1.95
SH3D19-205ENST00000462257 KRTAP13-4Q3LI77 160 aa2.85□□□□□ -1.95
SH3D19-205ENST00000462257 DSTQ03001 7570 aaKnown RBP2.84□□□□□ -1.95
SH3D19-205ENST00000462257 LINC01558Q9Y6Z2 57 aa2.83□□□□□ -1.96
SH3D19-205ENST00000462257 PRO0628Q9UI54 55 aa2.82□□□□□ -1.96
SH3D19-205ENST00000462257 SPATA8Q6RVD6 105 aa2.81□□□□□ -1.96
SH3D19-205ENST00000462257 A0A0D9SG42 100 aa2.8□□□□□ -1.96
SH3D19-205ENST00000462257 KRTAP5-5Q701N2 237 aaPredicted RBP2.8□□□□□ -1.96
SH3D19-205ENST00000462257 SPINT4Q6UDR6 99 aa2.77□□□□□ -1.97
SH3D19-205ENST00000462257 A8MU10 97 aa2.76□□□□□ -1.97
SH3D19-205ENST00000462257 UQCR11O14957 56 aa2.75□□□□□ -1.97
SH3D19-205ENST00000462257 KRTAP12-1P59990 96 aa2.75□□□□□ -1.97
SH3D19-205ENST00000462257 LCE1CQ5T751 118 aa2.75□□□□□ -1.97
SH3D19-205ENST00000462257 LCE1BQ5T7P3 118 aa2.75□□□□□ -1.97
SH3D19-205ENST00000462257 Q1T7F1 81 aa2.74□□□□□ -1.97
SH3D19-205ENST00000462257 RPS28P62857 69 aaKnown RBP2.73□□□□□ -1.97
SH3D19-205ENST00000462257 MIR22HGQ0VDD5 57 aa2.69□□□□□ -1.98
SH3D19-205ENST00000462257 KRTAP5-10Q6L8G5 202 aa2.67□□□□□ -1.98
SH3D19-205ENST00000462257 KRTAP19-3Q7Z4W3 81 aa2.67□□□□□ -1.98
SH3D19-205ENST00000462257 K7ERS5 55 aa2.66□□□□□ -1.98
SH3D19-205ENST00000462257 MT4P47944 62 aa2.66□□□□□ -1.98
SH3D19-205ENST00000462257 LUZP6Q538Z0 58 aa2.66□□□□□ -1.98
SH3D19-205ENST00000462257 HMCN1Q96RW7 5635 aa2.64□□□□□ -1.99
SH3D19-205ENST00000462257 A6NED7 52 aa2.63□□□□□ -1.99
SH3D19-205ENST00000462257 TNP1P09430 55 aa2.62□□□□□ -1.99
SH3D19-205ENST00000462257 KRTAP5-7Q6L8G8 165 aa2.62□□□□□ -1.99
SH3D19-205ENST00000462257 PP632Q6XCG6 107 aa2.62□□□□□ -1.99
SH3D19-205ENST00000462257 C10orf95Q9H7T3 257 aa2.62□□□□□ -1.99
SH3D19-205ENST00000462257 MT1EP04732 61 aa2.61□□□□□ -1.99
SH3D19-205ENST00000462257 MT1GP13640 62 aa2.61□□□□□ -1.99
SH3D19-205ENST00000462257 KRTAP19-7Q3SYF9 63 aa2.61□□□□□ -1.99
SH3D19-205ENST00000462257 AHNAK2Q8IVF2 5795 aa2.6□□□□□ -1.99
SH3D19-205ENST00000462257 KRTAP25-1Q3LHN0 102 aa2.54□□□□□ -2
SH3D19-205ENST00000462257 CDC42SE1Q9NRR8 79 aa2.53□□□□□ -2
SH3D19-205ENST00000462257 SPRR5A0A1B0GTR4 108 aa2.51□□□□□ -2.01
SH3D19-205ENST00000462257 PMAIP1Q13794 54 aa2.51□□□□□ -2.01
SH3D19-205ENST00000462257 KRTAP19-5Q3LI72 72 aa2.51□□□□□ -2.01
SH3D19-205ENST00000462257 MT1MQ8N339 61 aa2.51□□□□□ -2.01
SH3D19-205ENST00000462257 BRK1Q8WUW1 75 aa2.48□□□□□ -2.01
SH3D19-205ENST00000462257 ROMO1P60602 79 aa2.47□□□□□ -2.01
SH3D19-205ENST00000462257 MT1LQ93083 61 aa2.45□□□□□ -2.02
SH3D19-205ENST00000462257 KRTAP12-3P60328 96 aa2.44□□□□□ -2.02
SH3D19-205ENST00000462257 KRTAP20-2Q3LI61 65 aa2.43□□□□□ -2.02
SH3D19-205ENST00000462257 KRTAP12-4P60329 112 aa2.4□□□□□ -2.03
SH3D19-205ENST00000462257 LCE3DQ9BYE3 92 aa2.34□□□□□ -2.03
SH3D19-205ENST00000462257 MUC19Q7Z5P9 8384 aa2.27□□□□□ -2.05
SH3D19-205ENST00000462257 KTN1-AS1Q86SY8 53 aa2.25□□□□□ -2.05
SH3D19-205ENST00000462257 MUC5ACP98088 5654 aa2.24□□□□□ -2.05
SH3D19-205ENST00000462257 AHNAKQ09666 5890 aaKnown RBP2.24□□□□□ -2.05
SH3D19-205ENST00000462257 SYNE1Q8NF91 8797 aaKnown RBP2.19□□□□□ -2.06
SH3D19-205ENST00000462257 MUC5BQ9HC84 5762 aaPredicted RBP2.16□□□□□ -2.06
SH3D19-205ENST00000462257 MT1AP04731 61 aa2.1□□□□□ -2.07
SH3D19-205ENST00000462257 KRTAP6-1Q3LI64 71 aa2.07□□□□□ -2.08
SH3D19-205ENST00000462257 KRTAP6-2Q3LI66 62 aa2.05□□□□□ -2.08
SH3D19-205ENST00000462257 KRTAP21-2Q3LI59 83 aa1.98□□□□□ -2.09
SH3D19-205ENST00000462257 INE1O15225 51 aa1.76□□□□□ -2.13
SH3D19-205ENST00000462257 PHGR1C9JFL3 82 aa1.57□□□□□ -2.16
SH3D19-205ENST00000462257 PRM1P04553 51 aa1.25□□□□□ -2.21
SH3D19-205ENST00000462257 KRTAP21-1Q3LI58 79 aa1.23□□□□□ -2.21
SH3D19-205ENST00000462257 MUC16Q8WXI7 14507 aa0.91□□□□□ -2.26
Retrieved 78 of 20,778 RNA–protein pairs in 72.5 ms