RNA–Protein interactions for RNA: ENST00000462236.1

COPS3-204, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 5

Gene COPS3, Length 551 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-204ENST00000462236 KRTAP19-5Q3LI72 72 aa1.6□□□□□ -2.15
COPS3-204ENST00000462236 LINC01554Q52M75 96 aa1.6□□□□□ -2.15
COPS3-204ENST00000462236 C20orf197Q8N268 126 aa1.6□□□□□ -2.15
COPS3-204ENST00000462236 NAA38Q9BRA0 125 aaKnown RBP1.6□□□□□ -2.15
COPS3-204ENST00000462236 SYNE1Q8NF91 8797 aaKnown RBP1.6□□□□□ -2.15
COPS3-204ENST00000462236 TRAV22A0A0B4J277 110 aa1.57□□□□□ -2.16
COPS3-204ENST00000462236 LOC101927531A0A1B0GV80 90 aa1.57□□□□□ -2.16
COPS3-204ENST00000462236 KRTAP21-2Q3LI59 83 aa1.57□□□□□ -2.16
COPS3-204ENST00000462236 ACYP1P07311 99 aa1.56□□□□□ -2.16
COPS3-204ENST00000462236 S100A6P06703 90 aa1.55□□□□□ -2.16
COPS3-204ENST00000462236 H3BT86 120 aa1.54□□□□□ -2.16
COPS3-204ENST00000462236 S100A1P23297 94 aa1.52□□□□□ -2.17
COPS3-204ENST00000462236 BATFQ16520 125 aa1.52□□□□□ -2.17
COPS3-204ENST00000462236 PYY3Q5JQD4 70 aa1.52□□□□□ -2.17
COPS3-204ENST00000462236 UQCR10Q9UDW1 63 aa1.52□□□□□ -2.17
COPS3-204ENST00000462236 A0A0D9SG42 100 aa1.51□□□□□ -2.17
COPS3-204ENST00000462236 A0A1W2PPM0 123 aa1.51□□□□□ -2.17
COPS3-204ENST00000462236 MT-ATP8P03928 68 aa1.5□□□□□ -2.17
COPS3-204ENST00000462236 UBL5Q9BZL1 73 aa1.5□□□□□ -2.17
COPS3-204ENST00000462236 ATOX1O00244 68 aa1.48□□□□□ -2.17
COPS3-204ENST00000462236 SPCS1Q9Y6A9 102 aa1.48□□□□□ -2.17
COPS3-204ENST00000462236 H0Y9P7 68 aa1.47□□□□□ -2.17
COPS3-204ENST00000462236 UQCRQO14949 82 aa1.47□□□□□ -2.17
COPS3-204ENST00000462236 DMAC1Q96GE9 116 aa1.47□□□□□ -2.17
COPS3-204ENST00000462236 TSTD3H0UI37 97 aa1.46□□□□□ -2.18
COPS3-204ENST00000462236 TAX1BP3O14907 124 aa1.45□□□□□ -2.18
COPS3-204ENST00000462236 C10orf95Q9H7T3 257 aa1.45□□□□□ -2.18
COPS3-204ENST00000462236 M0R143 59 aa1.44□□□□□ -2.18
COPS3-204ENST00000462236 TMEM258P61165 79 aa1.43□□□□□ -2.18
COPS3-204ENST00000462236 COA5Q86WW8 74 aa1.42□□□□□ -2.18
COPS3-204ENST00000462236 LINC00208Q96KT6 92 aa1.42□□□□□ -2.18
COPS3-204ENST00000462236 TRAV7A0A075B6U4 112 aa1.4□□□□□ -2.19
COPS3-204ENST00000462236 HIST1H4AP62805 103 aaKnown RBP1.4□□□□□ -2.19
COPS3-204ENST00000462236 KRTAP6-1Q3LI64 71 aa1.38□□□□□ -2.19
COPS3-204ENST00000462236 KTN1-AS1Q86SY8 53 aa1.38□□□□□ -2.19
COPS3-204ENST00000462236 MT1AP04731 61 aa1.37□□□□□ -2.19
COPS3-204ENST00000462236 KRTAP6-2Q3LI66 62 aa1.34□□□□□ -2.19
COPS3-204ENST00000462236 SPTSSBQ8NFR3 76 aa1.34□□□□□ -2.19
COPS3-204ENST00000462236 ACYP2P14621 99 aa1.33□□□□□ -2.2
COPS3-204ENST00000462236 ATP5EP2Q5VTU8 51 aa1.33□□□□□ -2.2
COPS3-204ENST00000462236 TNP1P09430 55 aa1.31□□□□□ -2.2
COPS3-204ENST00000462236 Q1T7F1 81 aa1.3□□□□□ -2.2
COPS3-204ENST00000462236 ETDBQ3ZM63 59 aa1.29□□□□□ -2.2
COPS3-204ENST00000462236 SPATA8Q6RVD6 105 aa1.28□□□□□ -2.2
COPS3-204ENST00000462236 F8W1H4 67 aa1.26□□□□□ -2.21
COPS3-204ENST00000462236 CHKB-CPT1BH3BT56 60 aa1.25□□□□□ -2.21
COPS3-204ENST00000462236 SMIM6P0DI80 62 aa1.25□□□□□ -2.21
COPS3-204ENST00000462236 LINC00643Q86TS7 51 aa1.24□□□□□ -2.21
COPS3-204ENST00000462236 PMAIP1Q13794 54 aa1.23□□□□□ -2.21
COPS3-204ENST00000462236 COL5A1-AS1Q5SY13 56 aa1.2□□□□□ -2.22
COPS3-204ENST00000462236 GTF2H5Q6ZYL4 71 aa1.2□□□□□ -2.22
COPS3-204ENST00000462236 SCGB1A1P11684 91 aa1.18□□□□□ -2.22
COPS3-204ENST00000462236 SERP1Q9Y6X1 66 aa1.17□□□□□ -2.22
COPS3-204ENST00000462236 SNURFQ9Y675 71 aa1.14□□□□□ -2.23
COPS3-204ENST00000462236 SMIM20Q8N5G0 67 aa1.09□□□□□ -2.23
COPS3-204ENST00000462236 LOC105371267A0A1B0GV96 52 aa1.08□□□□□ -2.24
COPS3-204ENST00000462236 PHGR1C9JFL3 82 aa1.08□□□□□ -2.24
COPS3-204ENST00000462236 SERP2Q8N6R1 65 aa1.05□□□□□ -2.24
COPS3-204ENST00000462236 A0A1B0GU69 56 aa1.04□□□□□ -2.24
COPS3-204ENST00000462236 H7BZZ5 65 aa1.01□□□□□ -2.25
COPS3-204ENST00000462236 PRR15LQ9BU68 103 aa1□□□□□ -2.25
COPS3-204ENST00000462236 INE1O15225 51 aa0.97□□□□□ -2.25
COPS3-204ENST00000462236 J3QR89 54 aa0.96□□□□□ -2.26
COPS3-204ENST00000462236 LINC01558Q9Y6Z2 57 aa0.93□□□□□ -2.26
COPS3-204ENST00000462236 UQCR11O14957 56 aa0.91□□□□□ -2.26
COPS3-204ENST00000462236 A0A1B0GV90 55 aa0.9□□□□□ -2.27
COPS3-204ENST00000462236 ROMO1P60602 79 aa0.9□□□□□ -2.27
COPS3-204ENST00000462236 RPS28P62857 69 aaKnown RBP0.9□□□□□ -2.27
COPS3-204ENST00000462236 COX7CP15954 63 aa0.88□□□□□ -2.27
COPS3-204ENST00000462236 BRK1Q8WUW1 75 aa0.88□□□□□ -2.27
COPS3-204ENST00000462236 CDC42SE1Q9NRR8 79 aa0.87□□□□□ -2.27
COPS3-204ENST00000462236 MIR22HGQ0VDD5 57 aa0.86□□□□□ -2.27
COPS3-204ENST00000462236 MUC16Q8WXI7 14507 aa0.86□□□□□ -2.27
COPS3-204ENST00000462236 KRTAP21-1Q3LI58 79 aa0.84□□□□□ -2.27
COPS3-204ENST00000462236 K7ERU9 68 aa0.81□□□□□ -2.28
COPS3-204ENST00000462236 ATP5EP56381 51 aaPredicted RBP0.76□□□□□ -2.29
COPS3-204ENST00000462236 CCDC179H3BU77 68 aa0.73□□□□□ -2.29
COPS3-204ENST00000462236 PRM1P04553 51 aa0.38□□□□□ -2.35
Retrieved 78 of 20,778 RNA–protein pairs in 254.5 ms