RNA–Protein interactions for RNA: ENST00000462165.2

CBX3-205, Transcript of chromobox 3, humanhuman

TSL 3

Gene CBX3, Length 949 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-205ENST00000462165 SCGB1A1P11684 91 aa3.77□□□□□ -1.81
CBX3-205ENST00000462165 MT3P25713 68 aa3.76□□□□□ -1.81
CBX3-205ENST00000462165 KRTAP5-1Q6L8H4 278 aa3.72□□□□□ -1.81
CBX3-205ENST00000462165 KRTAP20-2Q3LI61 65 aa3.7□□□□□ -1.82
CBX3-205ENST00000462165 SPRR5A0A1B0GTR4 108 aa3.68□□□□□ -1.82
CBX3-205ENST00000462165 SPINT4Q6UDR6 99 aa3.67□□□□□ -1.82
CBX3-205ENST00000462165 C10orf95Q9H7T3 257 aa3.67□□□□□ -1.82
CBX3-205ENST00000462165 V9GYY9 64 aa3.66□□□□□ -1.82
CBX3-205ENST00000462165 KRTAP12-1P59990 96 aa3.64□□□□□ -1.83
CBX3-205ENST00000462165 LCE3AQ5TA76 89 aa3.64□□□□□ -1.83
CBX3-205ENST00000462165 SPATA8Q6RVD6 105 aa3.63□□□□□ -1.83
CBX3-205ENST00000462165 KRTAP5-5Q701N2 237 aaPredicted RBP3.61□□□□□ -1.83
CBX3-205ENST00000462165 SMIM20Q8N5G0 67 aa3.61□□□□□ -1.83
CBX3-205ENST00000462165 SPANXA2-OT1Q8N9U9 137 aa3.61□□□□□ -1.83
CBX3-205ENST00000462165 KRTAP4-4Q9BYR3 166 aa3.59□□□□□ -1.83
CBX3-205ENST00000462165 SERP1Q9Y6X1 66 aa3.59□□□□□ -1.83
CBX3-205ENST00000462165 SYNE1Q8NF91 8797 aaKnown RBP3.59□□□□□ -1.83
CBX3-205ENST00000462165 KRTAP12-4P60329 112 aa3.58□□□□□ -1.84
CBX3-205ENST00000462165 SNURFQ9Y675 71 aa3.58□□□□□ -1.84
CBX3-205ENST00000462165 J3QR89 54 aa3.57□□□□□ -1.84
CBX3-205ENST00000462165 A0A1B0GU33 70 aa3.55□□□□□ -1.84
CBX3-205ENST00000462165 TNP1P09430 55 aa3.54□□□□□ -1.84
CBX3-205ENST00000462165 COA5Q86WW8 74 aa3.51□□□□□ -1.85
CBX3-205ENST00000462165 KRTAP12-3P60328 96 aa3.49□□□□□ -1.85
CBX3-205ENST00000462165 PRAC1Q96KF2 57 aa3.49□□□□□ -1.85
CBX3-205ENST00000462165 KRTAP9-6A8MVA2 160 aa3.47□□□□□ -1.85
CBX3-205ENST00000462165 SMIM26A0A096LP01 95 aa3.46□□□□□ -1.86
CBX3-205ENST00000462165 A0A1B0GV90 55 aa3.46□□□□□ -1.86
CBX3-205ENST00000462165 A8MU10 97 aa3.42□□□□□ -1.86
CBX3-205ENST00000462165 AHNAKQ09666 5890 aaKnown RBP3.4□□□□□ -1.86
CBX3-205ENST00000462165 NDUFAF8A1L188 74 aa3.39□□□□□ -1.87
CBX3-205ENST00000462165 MUC5ACP98088 5654 aa3.39□□□□□ -1.87
CBX3-205ENST00000462165 MUC5BQ9HC84 5762 aaPredicted RBP3.37□□□□□ -1.87
CBX3-205ENST00000462165 KRTAP5-2Q701N4 177 aa3.37□□□□□ -1.87
CBX3-205ENST00000462165 SERP2Q8N6R1 65 aa3.37□□□□□ -1.87
CBX3-205ENST00000462165 LCE1FQ5T754 118 aa3.36□□□□□ -1.87
CBX3-205ENST00000462165 KRTAP5-8O75690 187 aa3.35□□□□□ -1.87
CBX3-205ENST00000462165 A0A1B0GU69 56 aa3.34□□□□□ -1.87
CBX3-205ENST00000462165 PRO0628Q9UI54 55 aa3.31□□□□□ -1.88
CBX3-205ENST00000462165 K7ERU9 68 aa3.27□□□□□ -1.89
CBX3-205ENST00000462165 OBSCNQ5VST9 7968 aa3.26□□□□□ -1.89
CBX3-205ENST00000462165 PSPHP1O15172 72 aa3.25□□□□□ -1.89
CBX3-205ENST00000462165 MT1AP04731 61 aa3.25□□□□□ -1.89
CBX3-205ENST00000462165 KRTAP6-1Q3LI64 71 aa3.25□□□□□ -1.89
CBX3-205ENST00000462165 H7BZZ5 65 aa3.22□□□□□ -1.89
CBX3-205ENST00000462165 PMAIP1Q13794 54 aa3.2□□□□□ -1.9
CBX3-205ENST00000462165 KRTAP25-1Q3LHN0 102 aa3.19□□□□□ -1.9
CBX3-205ENST00000462165 LCE3CQ5T5A8 94 aa3.19□□□□□ -1.9
CBX3-205ENST00000462165 COX7CP15954 63 aa3.17□□□□□ -1.9
CBX3-205ENST00000462165 KRTAP6-2Q3LI66 62 aa3.16□□□□□ -1.9
CBX3-205ENST00000462165 ANAPC13Q9BS18 74 aa3.16□□□□□ -1.9
CBX3-205ENST00000462165 PRR15LQ9BU68 103 aa3.14□□□□□ -1.91
CBX3-205ENST00000462165 RPS28P62857 69 aaKnown RBP3.06□□□□□ -1.92
CBX3-205ENST00000462165 LINC01558Q9Y6Z2 57 aa3.05□□□□□ -1.92
CBX3-205ENST00000462165 UQCR11O14957 56 aa3.04□□□□□ -1.92
CBX3-205ENST00000462165 K7ERS5 55 aa2.95□□□□□ -1.94
CBX3-205ENST00000462165 LUZP6Q538Z0 58 aa2.95□□□□□ -1.94
CBX3-205ENST00000462165 MIR22HGQ0VDD5 57 aa2.93□□□□□ -1.94
CBX3-205ENST00000462165 ATP5EP56381 51 aaPredicted RBP2.91□□□□□ -1.94
CBX3-205ENST00000462165 KTN1-AS1Q86SY8 53 aa2.91□□□□□ -1.94
CBX3-205ENST00000462165 A6NED7 52 aa2.84□□□□□ -1.95
CBX3-205ENST00000462165 LCE3EQ5T5B0 92 aa2.83□□□□□ -1.96
CBX3-205ENST00000462165 CCDC179H3BU77 68 aa2.82□□□□□ -1.96
CBX3-205ENST00000462165 BRK1Q8WUW1 75 aa2.78□□□□□ -1.96
CBX3-205ENST00000462165 CDC42SE1Q9NRR8 79 aa2.74□□□□□ -1.97
CBX3-205ENST00000462165 Q1T7F1 81 aa2.72□□□□□ -1.97
CBX3-205ENST00000462165 TMEM258P61165 79 aa2.69□□□□□ -1.98
CBX3-205ENST00000462165 ROMO1P60602 79 aa2.67□□□□□ -1.98
CBX3-205ENST00000462165 LCE1BQ5T7P3 118 aa2.66□□□□□ -1.98
CBX3-205ENST00000462165 LCE1CQ5T751 118 aa2.63□□□□□ -1.99
CBX3-205ENST00000462165 PHGR1C9JFL3 82 aa2.33□□□□□ -2.04
CBX3-205ENST00000462165 LCE3DQ9BYE3 92 aa2.33□□□□□ -2.04
CBX3-205ENST00000462165 MUC19Q7Z5P9 8384 aa2.22□□□□□ -2.05
CBX3-205ENST00000462165 INE1O15225 51 aa2.18□□□□□ -2.06
CBX3-205ENST00000462165 KRTAP21-2Q3LI59 83 aa2.15□□□□□ -2.07
CBX3-205ENST00000462165 KRTAP21-1Q3LI58 79 aa1.78□□□□□ -2.12
CBX3-205ENST00000462165 MUC16Q8WXI7 14507 aa1.42□□□□□ -2.18
CBX3-205ENST00000462165 PRM1P04553 51 aa1.35□□□□□ -2.19
Retrieved 78 of 20,778 RNA–protein pairs in 95.8 ms