RNA–Protein interactions for RNA: ENST00000462112.1

SSR1-203, Transcript of signal sequence receptor subunit 1, humanhuman

TSL 4 BASIC

Gene SSR1, Length 1,094 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1-203ENST00000462112 KRTAP10-12P60413 245 aa3.25□□□□□ -1.89
SSR1-203ENST00000462112 MIR22HGQ0VDD5 57 aa3.25□□□□□ -1.89
SSR1-203ENST00000462112 Q1T7F1 81 aa3.25□□□□□ -1.89
SSR1-203ENST00000462112 LCE1FQ5T754 118 aa3.25□□□□□ -1.89
SSR1-203ENST00000462112 SPRR2FQ96RM1 72 aa3.25□□□□□ -1.89
SSR1-203ENST00000462112 KRTAP4-4Q9BYR3 166 aa3.25□□□□□ -1.89
SSR1-203ENST00000462112 RPS28P62857 69 aaKnown RBP3.23□□□□□ -1.89
SSR1-203ENST00000462112 LCE1EQ5T753 118 aa3.23□□□□□ -1.89
SSR1-203ENST00000462112 PSPHP1O15172 72 aa3.22□□□□□ -1.89
SSR1-203ENST00000462112 TNP1P09430 55 aa3.2□□□□□ -1.9
SSR1-203ENST00000462112 PRO0628Q9UI54 55 aa3.2□□□□□ -1.9
SSR1-203ENST00000462112 A6NED7 52 aa3.18□□□□□ -1.9
SSR1-203ENST00000462112 SPRR2EP22531 72 aa3.18□□□□□ -1.9
SSR1-203ENST00000462112 SPRR2BP35325 72 aa3.18□□□□□ -1.9
SSR1-203ENST00000462112 SPRR2AP35326 72 aa3.18□□□□□ -1.9
SSR1-203ENST00000462112 KRTAP20-1Q3LI63 56 aa3.12□□□□□ -1.91
SSR1-203ENST00000462112 C10orf95Q9H7T3 257 aa3.1□□□□□ -1.91
SSR1-203ENST00000462112 KRTAP2-3P0C7H8 128 aa3.09□□□□□ -1.91
SSR1-203ENST00000462112 KRTAP2-4Q9BYR9 128 aa3.09□□□□□ -1.91
SSR1-203ENST00000462112 SPRR2DP22532 72 aa3.08□□□□□ -1.92
SSR1-203ENST00000462112 KRTAP25-1Q3LHN0 102 aa3.08□□□□□ -1.92
SSR1-203ENST00000462112 KMT2DO14686 5537 aa3.07□□□□□ -1.92
SSR1-203ENST00000462112 NEBP20929 6669 aa3.06□□□□□ -1.92
SSR1-203ENST00000462112 PMAIP1Q13794 54 aa3.06□□□□□ -1.92
SSR1-203ENST00000462112 CDC42SE1Q9NRR8 79 aa3.05□□□□□ -1.92
SSR1-203ENST00000462112 PP632Q6XCG6 107 aa3.03□□□□□ -1.92
SSR1-203ENST00000462112 MUC12Q9UKN1 5478 aa3.03□□□□□ -1.93
SSR1-203ENST00000462112 LCE3CQ5T5A8 94 aa3.02□□□□□ -1.93
SSR1-203ENST00000462112 LCE3AQ5TA76 89 aa3.02□□□□□ -1.93
SSR1-203ENST00000462112 MT1EP04732 61 aa3.01□□□□□ -1.93
SSR1-203ENST00000462112 KRTAP19-5Q3LI72 72 aa3.01□□□□□ -1.93
SSR1-203ENST00000462112 KRTAP19-7Q3SYF9 63 aa3.01□□□□□ -1.93
SSR1-203ENST00000462112 KRTAP2-1Q9BYU5 128 aa3□□□□□ -1.93
SSR1-203ENST00000462112 KRTAP19-3Q7Z4W3 81 aa2.99□□□□□ -1.93
SSR1-203ENST00000462112 MT1GP13640 62 aa2.98□□□□□ -1.93
SSR1-203ENST00000462112 ROMO1P60602 79 aa2.97□□□□□ -1.93
SSR1-203ENST00000462112 MDN1Q9NU22 5596 aa2.95□□□□□ -1.94
SSR1-203ENST00000462112 KRTAP12-3P60328 96 aa2.95□□□□□ -1.94
SSR1-203ENST00000462112 MT1LQ93083 61 aa2.91□□□□□ -1.94
SSR1-203ENST00000462112 BRK1Q8WUW1 75 aa2.87□□□□□ -1.95
SSR1-203ENST00000462112 KRTAP5-2Q701N4 177 aa2.86□□□□□ -1.95
SSR1-203ENST00000462112 MT1MQ8N339 61 aa2.86□□□□□ -1.95
SSR1-203ENST00000462112 KTN1-AS1Q86SY8 53 aa2.84□□□□□ -1.95
SSR1-203ENST00000462112 KRTAP4-3Q9BYR4 195 aa2.81□□□□□ -1.96
SSR1-203ENST00000462112 OBSCNQ5VST9 7968 aa2.76□□□□□ -1.97
SSR1-203ENST00000462112 DSTQ03001 7570 aaKnown RBP2.76□□□□□ -1.97
SSR1-203ENST00000462112 LCE3EQ5T5B0 92 aa2.76□□□□□ -1.97
SSR1-203ENST00000462112 KRTAP9-6A8MVA2 160 aa2.65□□□□□ -1.99
SSR1-203ENST00000462112 MT4P47944 62 aa2.65□□□□□ -1.99
SSR1-203ENST00000462112 LUZP6Q538Z0 58 aa2.64□□□□□ -1.99
SSR1-203ENST00000462112 KRTAP12-4P60329 112 aa2.62□□□□□ -1.99
SSR1-203ENST00000462112 KRTAP5-5Q701N2 237 aaPredicted RBP2.57□□□□□ -2
SSR1-203ENST00000462112 SPRR5A0A1B0GTR4 108 aa2.55□□□□□ -2
SSR1-203ENST00000462112 MT1AP04731 61 aa2.5□□□□□ -2.01
SSR1-203ENST00000462112 KRTAP20-2Q3LI61 65 aa2.5□□□□□ -2.01
SSR1-203ENST00000462112 KRTAP5-8O75690 187 aa2.49□□□□□ -2.01
SSR1-203ENST00000462112 HMCN1Q96RW7 5635 aa2.47□□□□□ -2.01
SSR1-203ENST00000462112 KRTAP6-1Q3LI64 71 aa2.42□□□□□ -2.02
SSR1-203ENST00000462112 GPR98Q8WXG9 6306 aa2.36□□□□□ -2.03
SSR1-203ENST00000462112 SYNE1Q8NF91 8797 aaKnown RBP2.36□□□□□ -2.03
SSR1-203ENST00000462112 KRTAP5-10Q6L8G5 202 aa2.36□□□□□ -2.03
SSR1-203ENST00000462112 LCE3DQ9BYE3 92 aa2.34□□□□□ -2.03
SSR1-203ENST00000462112 KRTAP6-2Q3LI66 62 aa2.32□□□□□ -2.04
SSR1-203ENST00000462112 AHNAK2Q8IVF2 5795 aa2.3□□□□□ -2.04
SSR1-203ENST00000462112 KRTAP5-7Q6L8G8 165 aa2.29□□□□□ -2.04
SSR1-203ENST00000462112 LCE1CQ5T751 118 aa2.04□□□□□ -2.08
SSR1-203ENST00000462112 LCE1BQ5T7P3 118 aa2.04□□□□□ -2.08
SSR1-203ENST00000462112 INE1O15225 51 aa1.99□□□□□ -2.09
SSR1-203ENST00000462112 MUC5ACP98088 5654 aa1.91□□□□□ -2.1
SSR1-203ENST00000462112 MUC5BQ9HC84 5762 aaPredicted RBP1.88□□□□□ -2.11
SSR1-203ENST00000462112 AHNAKQ09666 5890 aaKnown RBP1.86□□□□□ -2.11
SSR1-203ENST00000462112 MUC19Q7Z5P9 8384 aa1.68□□□□□ -2.14
SSR1-203ENST00000462112 KRTAP21-2Q3LI59 83 aa1.59□□□□□ -2.15
SSR1-203ENST00000462112 PRM1P04553 51 aa1.48□□□□□ -2.17
SSR1-203ENST00000462112 PHGR1C9JFL3 82 aa1.47□□□□□ -2.17
SSR1-203ENST00000462112 KRTAP21-1Q3LI58 79 aa1.11□□□□□ -2.23
SSR1-203ENST00000462112 MUC16Q8WXI7 14507 aa0.91□□□□□ -2.26
Retrieved 77 of 20,778 RNA–protein pairs in 64.7 ms