RNA–Protein interactions for RNA: ENST00000461539.5

C9orf78-203, Transcript of chromosome 9 open reading frame 78, humanhuman

TSL 5

Gene C9orf78, Length 637 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf78-203ENST00000461539 MDN1Q9NU22 5596 aa3.54□□□□□ -1.84
C9orf78-203ENST00000461539 LCE1AQ5T7P2 110 aa3.54□□□□□ -1.84
C9orf78-203ENST00000461539 LOC100996750A0A140TA64 210 aa3.53□□□□□ -1.84
C9orf78-203ENST00000461539 PRAC1Q96KF2 57 aa3.53□□□□□ -1.84
C9orf78-203ENST00000461539 KRTAP4-6Q9BYQ5 205 aa3.53□□□□□ -1.84
C9orf78-203ENST00000461539 KRTAP19-3Q7Z4W3 81 aa3.5□□□□□ -1.85
C9orf78-203ENST00000461539 KTN1-AS1Q86SY8 53 aa3.49□□□□□ -1.85
C9orf78-203ENST00000461539 MT1LQ93083 61 aa3.49□□□□□ -1.85
C9orf78-203ENST00000461539 KRTAP15-1Q3LI76 137 aa3.46□□□□□ -1.86
C9orf78-203ENST00000461539 MT1GP13640 62 aa3.45□□□□□ -1.86
C9orf78-203ENST00000461539 LCE5AQ5TCM9 118 aa3.45□□□□□ -1.86
C9orf78-203ENST00000461539 SPRR2DP22532 72 aa3.44□□□□□ -1.86
C9orf78-203ENST00000461539 MT1MQ8N339 61 aa3.4□□□□□ -1.87
C9orf78-203ENST00000461539 KRTAP19-4Q3LI73 84 aa3.36□□□□□ -1.87
C9orf78-203ENST00000461539 KRTAP4-7Q9BYR0 210 aa3.36□□□□□ -1.87
C9orf78-203ENST00000461539 SVIPQ8NHG7 77 aa3.35□□□□□ -1.87
C9orf78-203ENST00000461539 KRTAP20-1Q3LI63 56 aa3.33□□□□□ -1.88
C9orf78-203ENST00000461539 KRTAP2-3P0C7H8 128 aa3.32□□□□□ -1.88
C9orf78-203ENST00000461539 LCE3CQ5T5A8 94 aa3.32□□□□□ -1.88
C9orf78-203ENST00000461539 KRTAP4-3Q9BYR4 195 aa3.32□□□□□ -1.88
C9orf78-203ENST00000461539 KRTAP2-4Q9BYR9 128 aa3.32□□□□□ -1.88
C9orf78-203ENST00000461539 LCE3BQ5TA77 95 aa3.31□□□□□ -1.88
C9orf78-203ENST00000461539 KRTAP2-2Q9BYT5 123 aa3.24□□□□□ -1.89
C9orf78-203ENST00000461539 KRTAP2-1Q9BYU5 128 aa3.24□□□□□ -1.89
C9orf78-203ENST00000461539 DSTQ03001 7570 aaKnown RBP3.2□□□□□ -1.9
C9orf78-203ENST00000461539 KRTAP9-6A8MVA2 160 aa3.12□□□□□ -1.91
C9orf78-203ENST00000461539 SPRR5A0A1B0GTR4 108 aa3.08□□□□□ -1.92
C9orf78-203ENST00000461539 KRTAP5-5Q701N2 237 aaPredicted RBP3.06□□□□□ -1.92
C9orf78-203ENST00000461539 LCE4AQ5TA78 99 aa3.04□□□□□ -1.92
C9orf78-203ENST00000461539 KRTAP5-4Q6L8H1 288 aa3.03□□□□□ -1.92
C9orf78-203ENST00000461539 KRTAP4-9Q9BYQ8 210 aa3.01□□□□□ -1.93
C9orf78-203ENST00000461539 GPR98Q8WXG9 6306 aa3□□□□□ -1.93
C9orf78-203ENST00000461539 MT4P47944 62 aa3□□□□□ -1.93
C9orf78-203ENST00000461539 MT1AP04731 61 aa2.98□□□□□ -1.93
C9orf78-203ENST00000461539 LCE1DQ5T752 114 aa2.96□□□□□ -1.94
C9orf78-203ENST00000461539 SYNE1Q8NF91 8797 aaKnown RBP2.95□□□□□ -1.94
C9orf78-203ENST00000461539 KRTAP12-4P60329 112 aa2.94□□□□□ -1.94
C9orf78-203ENST00000461539 KRTAP6-1Q3LI64 71 aa2.94□□□□□ -1.94
C9orf78-203ENST00000461539 LUZP6Q538Z0 58 aa2.93□□□□□ -1.94
C9orf78-203ENST00000461539 KRTAP9-9Q9BYP9 154 aa2.91□□□□□ -1.94
C9orf78-203ENST00000461539 KRTAP9-4Q9BYQ2 154 aa2.91□□□□□ -1.94
C9orf78-203ENST00000461539 HMCN1Q96RW7 5635 aa2.88□□□□□ -1.95
C9orf78-203ENST00000461539 KRTAP4-12Q9BQ66 201 aa2.86□□□□□ -1.95
C9orf78-203ENST00000461539 KRTAP20-2Q3LI61 65 aa2.85□□□□□ -1.95
C9orf78-203ENST00000461539 H3BS24 57 aa2.8□□□□□ -1.96
C9orf78-203ENST00000461539 KRTAP6-2Q3LI66 62 aa2.75□□□□□ -1.97
C9orf78-203ENST00000461539 KRTAP5-3Q6L8H2 238 aa2.74□□□□□ -1.97
C9orf78-203ENST00000461539 KRTAP4-2Q9BYR5 136 aa2.73□□□□□ -1.97
C9orf78-203ENST00000461539 MT3P25713 68 aa2.72□□□□□ -1.97
C9orf78-203ENST00000461539 KRTAP5-2Q701N4 177 aa2.71□□□□□ -1.98
C9orf78-203ENST00000461539 NDUFAF8A1L188 74 aa2.69□□□□□ -1.98
C9orf78-203ENST00000461539 AHNAK2Q8IVF2 5795 aa2.67□□□□□ -1.98
C9orf78-203ENST00000461539 A0A0A0MQY5 61 aa2.56□□□□□ -2
C9orf78-203ENST00000461539 KRTAP5-10Q6L8G5 202 aa2.56□□□□□ -2
C9orf78-203ENST00000461539 KRTAP4-11Q9BYQ6 195 aa2.56□□□□□ -2
C9orf78-203ENST00000461539 OBSCNQ5VST9 7968 aa2.48□□□□□ -2.01
C9orf78-203ENST00000461539 LCE3DQ9BYE3 92 aa2.47□□□□□ -2.01
C9orf78-203ENST00000461539 KRTAP5-8O75690 187 aa2.42□□□□□ -2.02
C9orf78-203ENST00000461539 KRTAP5-7Q6L8G8 165 aa2.42□□□□□ -2.02
C9orf78-203ENST00000461539 LCE1EQ5T753 118 aa2.39□□□□□ -2.03
C9orf78-203ENST00000461539 LCE3EQ5T5B0 92 aa2.38□□□□□ -2.03
C9orf78-203ENST00000461539 KRTAP5-1Q6L8H4 278 aa2.37□□□□□ -2.03
C9orf78-203ENST00000461539 MUC5ACP98088 5654 aa2.32□□□□□ -2.04
C9orf78-203ENST00000461539 LCE1BQ5T7P3 118 aa2.28□□□□□ -2.04
C9orf78-203ENST00000461539 AHNAKQ09666 5890 aaKnown RBP2.26□□□□□ -2.05
C9orf78-203ENST00000461539 LCE1CQ5T751 118 aa2.22□□□□□ -2.05
C9orf78-203ENST00000461539 INE1O15225 51 aa2.2□□□□□ -2.06
C9orf78-203ENST00000461539 MUC5BQ9HC84 5762 aaPredicted RBP2.16□□□□□ -2.06
C9orf78-203ENST00000461539 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.04□□□□□ -2.08
C9orf78-203ENST00000461539 PRM1P04553 51 aa1.98□□□□□ -2.09
C9orf78-203ENST00000461539 KRTAP5-11Q6L8G4 156 aa1.98□□□□□ -2.09
C9orf78-203ENST00000461539 KRTAP21-2Q3LI59 83 aa1.92□□□□□ -2.1
C9orf78-203ENST00000461539 LCE1FQ5T754 118 aa1.84□□□□□ -2.11
C9orf78-203ENST00000461539 KRTAP4-4Q9BYR3 166 aa1.75□□□□□ -2.13
C9orf78-203ENST00000461539 PHGR1C9JFL3 82 aa1.7□□□□□ -2.14
C9orf78-203ENST00000461539 MUC19Q7Z5P9 8384 aa1.51□□□□□ -2.17
C9orf78-203ENST00000461539 KRTAP21-1Q3LI58 79 aa1.15□□□□□ -2.23
C9orf78-203ENST00000461539 MUC16Q8WXI7 14507 aa1.1□□□□□ -2.23
Retrieved 78 of 20,778 RNA–protein pairs in 117.4 ms