RNA–Protein interactions for RNA: ENST00000461525.5

COL1A2-202, Transcript of collagen type I alpha 2 chain, humanhuman

TSL 1 (best)

Gene COL1A2, Length 776 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A2-202ENST00000461525 PRR15LQ9BU68 103 aa6.13□□□□□ -1.43
COL1A2-202ENST00000461525 KRTAP5-4Q6L8H1 288 aa6.08□□□□□ -1.44
COL1A2-202ENST00000461525 CCDC179H3BU77 68 aa6.05□□□□□ -1.44
COL1A2-202ENST00000461525 ATP5EP56381 51 aaPredicted RBP6.05□□□□□ -1.44
COL1A2-202ENST00000461525 LINC01558Q9Y6Z2 57 aa6.01□□□□□ -1.45
COL1A2-202ENST00000461525 KRTAP12-3P60328 96 aa6□□□□□ -1.45
COL1A2-202ENST00000461525 AHNAK2Q8IVF2 5795 aa5.99□□□□□ -1.45
COL1A2-202ENST00000461525 KRTAP4-6Q9BYQ5 205 aa5.98□□□□□ -1.45
COL1A2-202ENST00000461525 KRTAP4-7Q9BYR0 210 aa5.96□□□□□ -1.46
COL1A2-202ENST00000461525 UQCR11O14957 56 aa5.91□□□□□ -1.46
COL1A2-202ENST00000461525 KRTAP5-10Q6L8G5 202 aa5.89□□□□□ -1.47
COL1A2-202ENST00000461525 TMEM258P61165 79 aa5.82□□□□□ -1.48
COL1A2-202ENST00000461525 KRTAP25-1Q3LHN0 102 aa5.81□□□□□ -1.48
COL1A2-202ENST00000461525 KRTAP5-5Q701N2 237 aaPredicted RBP5.78□□□□□ -1.48
COL1A2-202ENST00000461525 MIR22HGQ0VDD5 57 aa5.76□□□□□ -1.49
COL1A2-202ENST00000461525 KRTAP20-2Q3LI61 65 aa5.76□□□□□ -1.49
COL1A2-202ENST00000461525 KRTAP5-3Q6L8H2 238 aa5.73□□□□□ -1.49
COL1A2-202ENST00000461525 SPRR5A0A1B0GTR4 108 aa5.71□□□□□ -1.5
COL1A2-202ENST00000461525 K7ERS5 55 aa5.71□□□□□ -1.5
COL1A2-202ENST00000461525 KRTAP12-4P60329 112 aa5.69□□□□□ -1.5
COL1A2-202ENST00000461525 KRTAP5-7Q6L8G8 165 aa5.68□□□□□ -1.5
COL1A2-202ENST00000461525 LOC100996750A0A140TA64 210 aa5.65□□□□□ -1.5
COL1A2-202ENST00000461525 KRTAP19-4Q3LI73 84 aa5.64□□□□□ -1.51
COL1A2-202ENST00000461525 SYNE1Q8NF91 8797 aaKnown RBP5.57□□□□□ -1.52
COL1A2-202ENST00000461525 KRTAP23-1A1A580 65 aa5.56□□□□□ -1.52
COL1A2-202ENST00000461525 PSPHP1O15172 72 aa5.56□□□□□ -1.52
COL1A2-202ENST00000461525 KRTAP15-1Q3LI76 137 aa5.56□□□□□ -1.52
COL1A2-202ENST00000461525 V9GYY9 64 aa5.55□□□□□ -1.52
COL1A2-202ENST00000461525 LCE3CQ5T5A8 94 aa5.5□□□□□ -1.53
COL1A2-202ENST00000461525 Q1T7F1 81 aa5.48□□□□□ -1.53
COL1A2-202ENST00000461525 A6NED7 52 aa5.38□□□□□ -1.55
COL1A2-202ENST00000461525 CDC42SE1Q9NRR8 79 aa5.38□□□□□ -1.55
COL1A2-202ENST00000461525 PCP4P48539 62 aa5.36□□□□□ -1.55
COL1A2-202ENST00000461525 MT1AP04731 61 aa5.35□□□□□ -1.55
COL1A2-202ENST00000461525 KRTAP6-1Q3LI64 71 aa5.32□□□□□ -1.56
COL1A2-202ENST00000461525 KRTAP5-2Q701N4 177 aa5.3□□□□□ -1.56
COL1A2-202ENST00000461525 KRTAP4-11Q9BYQ6 195 aa5.29□□□□□ -1.56
COL1A2-202ENST00000461525 ROMO1P60602 79 aa5.27□□□□□ -1.57
COL1A2-202ENST00000461525 RPS28P62857 69 aaKnown RBP5.26□□□□□ -1.57
COL1A2-202ENST00000461525 KRTAP9-6A8MVA2 160 aa5.18□□□□□ -1.58
COL1A2-202ENST00000461525 KRTAP9-4Q9BYQ2 154 aa5.17□□□□□ -1.58
COL1A2-202ENST00000461525 KRTAP6-2Q3LI66 62 aa5.12□□□□□ -1.59
COL1A2-202ENST00000461525 KRTAP5-8O75690 187 aa5.11□□□□□ -1.59
COL1A2-202ENST00000461525 AHNAKQ09666 5890 aaKnown RBP5□□□□□ -1.61
COL1A2-202ENST00000461525 OBSCNQ5VST9 7968 aa4.99□□□□□ -1.61
COL1A2-202ENST00000461525 MUC5ACP98088 5654 aa4.99□□□□□ -1.61
COL1A2-202ENST00000461525 MUC5BQ9HC84 5762 aaPredicted RBP4.96□□□□□ -1.62
COL1A2-202ENST00000461525 MT3P25713 68 aa4.91□□□□□ -1.62
COL1A2-202ENST00000461525 KRTAP9-9Q9BYP9 154 aa4.89□□□□□ -1.63
COL1A2-202ENST00000461525 KRTAP5-1Q6L8H4 278 aa4.78□□□□□ -1.64
COL1A2-202ENST00000461525 LCE1EQ5T753 118 aa4.54□□□□□ -1.68
COL1A2-202ENST00000461525 BRK1Q8WUW1 75 aa4.44□□□□□ -1.7
COL1A2-202ENST00000461525 PRO0628Q9UI54 55 aa4.35□□□□□ -1.71
COL1A2-202ENST00000461525 LCE1BQ5T7P3 118 aa4.3□□□□□ -1.72
COL1A2-202ENST00000461525 KRTAP4-2Q9BYR5 136 aa4.29□□□□□ -1.72
COL1A2-202ENST00000461525 PMAIP1Q13794 54 aa4.23□□□□□ -1.73
COL1A2-202ENST00000461525 LCE1CQ5T751 118 aa4.2□□□□□ -1.74
COL1A2-202ENST00000461525 KTN1-AS1Q86SY8 53 aa4.03□□□□□ -1.76
COL1A2-202ENST00000461525 PRAC1Q96KF2 57 aa4.03□□□□□ -1.76
COL1A2-202ENST00000461525 SVIPQ8NHG7 77 aa3.95□□□□□ -1.78
COL1A2-202ENST00000461525 KRTAP4-12Q9BQ66 201 aa3.95□□□□□ -1.78
COL1A2-202ENST00000461525 LCE3DQ9BYE3 92 aa3.94□□□□□ -1.78
COL1A2-202ENST00000461525 KRTAP5-11Q6L8G4 156 aa3.83□□□□□ -1.8
COL1A2-202ENST00000461525 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.8□□□□□ -1.8
COL1A2-202ENST00000461525 LCE1FQ5T754 118 aa3.75□□□□□ -1.81
COL1A2-202ENST00000461525 LCE3EQ5T5B0 92 aa3.68□□□□□ -1.82
COL1A2-202ENST00000461525 KRTAP21-2Q3LI59 83 aa3.5□□□□□ -1.85
COL1A2-202ENST00000461525 PHGR1C9JFL3 82 aa3.46□□□□□ -1.86
COL1A2-202ENST00000461525 LUZP6Q538Z0 58 aa3.46□□□□□ -1.86
COL1A2-202ENST00000461525 KRTAP4-4Q9BYR3 166 aa3.24□□□□□ -1.89
COL1A2-202ENST00000461525 MUC19Q7Z5P9 8384 aa3.09□□□□□ -1.91
COL1A2-202ENST00000461525 NDUFAF8A1L188 74 aa3.09□□□□□ -1.91
COL1A2-202ENST00000461525 A0A0A0MQY5 61 aa2.87□□□□□ -1.95
COL1A2-202ENST00000461525 PRM1P04553 51 aa2.68□□□□□ -1.98
COL1A2-202ENST00000461525 H3BS24 57 aa2.67□□□□□ -1.98
COL1A2-202ENST00000461525 INE1O15225 51 aa2.67□□□□□ -1.98
COL1A2-202ENST00000461525 KRTAP21-1Q3LI58 79 aa2.63□□□□□ -1.99
COL1A2-202ENST00000461525 MUC16Q8WXI7 14507 aa2.17□□□□□ -2.06
Retrieved 78 of 20,778 RNA–protein pairs in 54.6 ms