RNA–Protein interactions for RNA: ENST00000461469.5

LMBR1-214, Transcript of limb development membrane protein 1, humanhuman

TSL 3

Gene LMBR1, Length 560 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMBR1-214ENST00000461469 GPR98Q8WXG9 6306 aa8.18□□□□□ -1.1
LMBR1-214ENST00000461469 TMEM258P61165 79 aa8.13□□□□□ -1.11
LMBR1-214ENST00000461469 LCE4AQ5TA78 99 aa8.11□□□□□ -1.11
LMBR1-214ENST00000461469 MT4P47944 62 aa8.09□□□□□ -1.11
LMBR1-214ENST00000461469 KRTAP4-7Q9BYR0 210 aa8.07□□□□□ -1.12
LMBR1-214ENST00000461469 UQCR11O14957 56 aa8.06□□□□□ -1.12
LMBR1-214ENST00000461469 KRTAP12-3P60328 96 aa8.04□□□□□ -1.12
LMBR1-214ENST00000461469 HMCN1Q96RW7 5635 aa8.04□□□□□ -1.12
LMBR1-214ENST00000461469 KRTAP5-4Q6L8H1 288 aa8.03□□□□□ -1.12
LMBR1-214ENST00000461469 MIR22HGQ0VDD5 57 aa7.91□□□□□ -1.14
LMBR1-214ENST00000461469 KRTAP4-6Q9BYQ5 205 aa7.91□□□□□ -1.14
LMBR1-214ENST00000461469 KRTAP25-1Q3LHN0 102 aa7.81□□□□□ -1.16
LMBR1-214ENST00000461469 AHNAK2Q8IVF2 5795 aa7.81□□□□□ -1.16
LMBR1-214ENST00000461469 PSPHP1O15172 72 aa7.77□□□□□ -1.17
LMBR1-214ENST00000461469 KRTAP5-5Q701N2 237 aaPredicted RBP7.72□□□□□ -1.17
LMBR1-214ENST00000461469 Q1T7F1 81 aa7.68□□□□□ -1.18
LMBR1-214ENST00000461469 LOC100996750A0A140TA64 210 aa7.65□□□□□ -1.18
LMBR1-214ENST00000461469 KRTAP5-10Q6L8G5 202 aa7.65□□□□□ -1.18
LMBR1-214ENST00000461469 K7ERS5 55 aa7.64□□□□□ -1.19
LMBR1-214ENST00000461469 V9GYY9 64 aa7.63□□□□□ -1.19
LMBR1-214ENST00000461469 KRTAP20-2Q3LI61 65 aa7.57□□□□□ -1.2
LMBR1-214ENST00000461469 H3BS24 57 aa7.56□□□□□ -1.2
LMBR1-214ENST00000461469 KRTAP23-1A1A580 65 aa7.5□□□□□ -1.21
LMBR1-214ENST00000461469 KRTAP15-1Q3LI76 137 aa7.49□□□□□ -1.21
LMBR1-214ENST00000461469 SPRR5A0A1B0GTR4 108 aa7.47□□□□□ -1.21
LMBR1-214ENST00000461469 KRTAP5-3Q6L8H2 238 aa7.45□□□□□ -1.22
LMBR1-214ENST00000461469 SYNE1Q8NF91 8797 aaKnown RBP7.45□□□□□ -1.22
LMBR1-214ENST00000461469 A6NED7 52 aa7.43□□□□□ -1.22
LMBR1-214ENST00000461469 KRTAP19-4Q3LI73 84 aa7.43□□□□□ -1.22
LMBR1-214ENST00000461469 LCE3CQ5T5A8 94 aa7.41□□□□□ -1.22
LMBR1-214ENST00000461469 KRTAP12-4P60329 112 aa7.39□□□□□ -1.23
LMBR1-214ENST00000461469 KRTAP5-7Q6L8G8 165 aa7.32□□□□□ -1.24
LMBR1-214ENST00000461469 CDC42SE1Q9NRR8 79 aa7.3□□□□□ -1.24
LMBR1-214ENST00000461469 ROMO1P60602 79 aa7.23□□□□□ -1.25
LMBR1-214ENST00000461469 RPS28P62857 69 aaKnown RBP7.16□□□□□ -1.26
LMBR1-214ENST00000461469 KRTAP6-1Q3LI64 71 aa7.14□□□□□ -1.27
LMBR1-214ENST00000461469 MT1AP04731 61 aa7.13□□□□□ -1.27
LMBR1-214ENST00000461469 KRTAP9-6A8MVA2 160 aa7.12□□□□□ -1.27
LMBR1-214ENST00000461469 KRTAP5-2Q701N4 177 aa7.04□□□□□ -1.28
LMBR1-214ENST00000461469 PCP4P48539 62 aa6.99□□□□□ -1.29
LMBR1-214ENST00000461469 KRTAP4-11Q9BYQ6 195 aa6.91□□□□□ -1.3
LMBR1-214ENST00000461469 KRTAP9-4Q9BYQ2 154 aa6.89□□□□□ -1.31
LMBR1-214ENST00000461469 KRTAP6-2Q3LI66 62 aa6.81□□□□□ -1.32
LMBR1-214ENST00000461469 KRTAP5-8O75690 187 aa6.72□□□□□ -1.33
LMBR1-214ENST00000461469 SVIPQ8NHG7 77 aa6.67□□□□□ -1.34
LMBR1-214ENST00000461469 OBSCNQ5VST9 7968 aa6.58□□□□□ -1.36
LMBR1-214ENST00000461469 MT3P25713 68 aa6.47□□□□□ -1.37
LMBR1-214ENST00000461469 MUC5BQ9HC84 5762 aaPredicted RBP6.38□□□□□ -1.39
LMBR1-214ENST00000461469 AHNAKQ09666 5890 aaKnown RBP6.37□□□□□ -1.39
LMBR1-214ENST00000461469 MUC5ACP98088 5654 aa6.36□□□□□ -1.39
LMBR1-214ENST00000461469 KRTAP5-1Q6L8H4 278 aa6.33□□□□□ -1.4
LMBR1-214ENST00000461469 KRTAP9-9Q9BYP9 154 aa6.28□□□□□ -1.4
LMBR1-214ENST00000461469 BRK1Q8WUW1 75 aa6.27□□□□□ -1.41
LMBR1-214ENST00000461469 KRTAP4-12Q9BQ66 201 aa6□□□□□ -1.45
LMBR1-214ENST00000461469 LCE1EQ5T753 118 aa5.95□□□□□ -1.46
LMBR1-214ENST00000461469 PMAIP1Q13794 54 aa5.85□□□□□ -1.47
LMBR1-214ENST00000461469 PRAC1Q96KF2 57 aa5.81□□□□□ -1.48
LMBR1-214ENST00000461469 KRTAP4-2Q9BYR5 136 aa5.73□□□□□ -1.49
LMBR1-214ENST00000461469 LCE1BQ5T7P3 118 aa5.66□□□□□ -1.5
LMBR1-214ENST00000461469 A0A0A0MQY5 61 aa5.65□□□□□ -1.5
LMBR1-214ENST00000461469 LCE1CQ5T751 118 aa5.54□□□□□ -1.52
LMBR1-214ENST00000461469 LCE3DQ9BYE3 92 aa5.29□□□□□ -1.56
LMBR1-214ENST00000461469 PRO0628Q9UI54 55 aa5.27□□□□□ -1.57
LMBR1-214ENST00000461469 KTN1-AS1Q86SY8 53 aa5.1□□□□□ -1.59
LMBR1-214ENST00000461469 KRTAP5-6Q6L8G9 129 aaPredicted RBP5.05□□□□□ -1.6
LMBR1-214ENST00000461469 KRTAP5-11Q6L8G4 156 aa5.04□□□□□ -1.6
LMBR1-214ENST00000461469 LCE3EQ5T5B0 92 aa4.97□□□□□ -1.61
LMBR1-214ENST00000461469 LCE1FQ5T754 118 aa4.85□□□□□ -1.63
LMBR1-214ENST00000461469 LUZP6Q538Z0 58 aa4.72□□□□□ -1.65
LMBR1-214ENST00000461469 KRTAP21-2Q3LI59 83 aa4.71□□□□□ -1.66
LMBR1-214ENST00000461469 PHGR1C9JFL3 82 aa4.42□□□□□ -1.7
LMBR1-214ENST00000461469 NDUFAF8A1L188 74 aa4.38□□□□□ -1.71
LMBR1-214ENST00000461469 KRTAP4-4Q9BYR3 166 aa4.35□□□□□ -1.71
LMBR1-214ENST00000461469 MUC19Q7Z5P9 8384 aa4.05□□□□□ -1.76
LMBR1-214ENST00000461469 PRM1P04553 51 aa3.74□□□□□ -1.81
LMBR1-214ENST00000461469 KRTAP21-1Q3LI58 79 aa3.31□□□□□ -1.88
LMBR1-214ENST00000461469 MUC16Q8WXI7 14507 aa2.9□□□□□ -1.94
LMBR1-214ENST00000461469 INE1O15225 51 aa2.84□□□□□ -1.95
Retrieved 78 of 20,778 RNA–protein pairs in 11.4 ms