RNA–Protein interactions for RNA: ENST00000461239.2

ECHDC1-212, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 617 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-212ENST00000461239 NEBP20929 6669 aa3.54□□□□□ -1.84
ECHDC1-212ENST00000461239 MT1BP07438 61 aa3.54□□□□□ -1.84
ECHDC1-212ENST00000461239 A6NN06 94 aa3.53□□□□□ -1.84
ECHDC1-212ENST00000461239 UQCR11O14957 56 aa3.53□□□□□ -1.84
ECHDC1-212ENST00000461239 KRTAP19-8Q3LI54 63 aa3.53□□□□□ -1.84
ECHDC1-212ENST00000461239 KRTAP19-6Q3LI70 58 aa3.53□□□□□ -1.84
ECHDC1-212ENST00000461239 SPATA8Q6RVD6 105 aa3.53□□□□□ -1.84
ECHDC1-212ENST00000461239 ADM2Q7Z4H4 148 aa3.52□□□□□ -1.85
ECHDC1-212ENST00000461239 P0C880 135 aa3.5□□□□□ -1.85
ECHDC1-212ENST00000461239 GPR98Q8WXG9 6306 aa3.49□□□□□ -1.85
ECHDC1-212ENST00000461239 K7ERS5 55 aa3.48□□□□□ -1.85
ECHDC1-212ENST00000461239 CRIPTQ9P021 101 aa3.48□□□□□ -1.85
ECHDC1-212ENST00000461239 MIR22HGQ0VDD5 57 aa3.47□□□□□ -1.85
ECHDC1-212ENST00000461239 LCE3AQ5TA76 89 aa3.44□□□□□ -1.86
ECHDC1-212ENST00000461239 R4GN34 69 aa3.44□□□□□ -1.86
ECHDC1-212ENST00000461239 MACF1Q9UPN3 7388 aaKnown RBP3.44□□□□□ -1.86
ECHDC1-212ENST00000461239 KRTAP25-1Q3LHN0 102 aa3.39□□□□□ -1.87
ECHDC1-212ENST00000461239 M0QZ58 72 aa3.38□□□□□ -1.87
ECHDC1-212ENST00000461239 A0A1B0GU33 70 aa3.36□□□□□ -1.87
ECHDC1-212ENST00000461239 KRTAP5-8O75690 187 aa3.35□□□□□ -1.87
ECHDC1-212ENST00000461239 MT1XP80297 61 aa3.34□□□□□ -1.87
ECHDC1-212ENST00000461239 KRTAP13-4Q3LI77 160 aa3.34□□□□□ -1.87
ECHDC1-212ENST00000461239 LINC01554Q52M75 96 aa3.32□□□□□ -1.88
ECHDC1-212ENST00000461239 PLAC4Q8WY50 150 aa3.3□□□□□ -1.88
ECHDC1-212ENST00000461239 PP632Q6XCG6 107 aa3.27□□□□□ -1.89
ECHDC1-212ENST00000461239 KMT2DO14686 5537 aa3.26□□□□□ -1.89
ECHDC1-212ENST00000461239 KRTAP6-3Q3LI67 103 aa3.25□□□□□ -1.89
ECHDC1-212ENST00000461239 MUC12Q9UKN1 5478 aa3.24□□□□□ -1.89
ECHDC1-212ENST00000461239 PRO2289Q9P1D8 64 aa3.23□□□□□ -1.89
ECHDC1-212ENST00000461239 KRTAP5-5Q701N2 237 aaPredicted RBP3.22□□□□□ -1.89
ECHDC1-212ENST00000461239 KRTAP20-1Q3LI63 56 aa3.21□□□□□ -1.9
ECHDC1-212ENST00000461239 ROMO1P60602 79 aa3.19□□□□□ -1.9
ECHDC1-212ENST00000461239 A0A0D9SG42 100 aa3.18□□□□□ -1.9
ECHDC1-212ENST00000461239 KRTAP12-1P59990 96 aa3.16□□□□□ -1.9
ECHDC1-212ENST00000461239 MDN1Q9NU22 5596 aa3.14□□□□□ -1.91
ECHDC1-212ENST00000461239 KRTAP8-1Q8IUC2 63 aa3.1□□□□□ -1.91
ECHDC1-212ENST00000461239 SPRR2FQ96RM1 72 aa3.08□□□□□ -1.92
ECHDC1-212ENST00000461239 C10orf95Q9H7T3 257 aa3.03□□□□□ -1.92
ECHDC1-212ENST00000461239 LCE1CQ5T751 118 aa3.01□□□□□ -1.93
ECHDC1-212ENST00000461239 LCE1BQ5T7P3 118 aa3.01□□□□□ -1.93
ECHDC1-212ENST00000461239 SPRR2EP22531 72 aa3□□□□□ -1.93
ECHDC1-212ENST00000461239 SPRR2BP35325 72 aa3□□□□□ -1.93
ECHDC1-212ENST00000461239 SPRR2AP35326 72 aa3□□□□□ -1.93
ECHDC1-212ENST00000461239 KRTAP19-7Q3SYF9 63 aa3□□□□□ -1.93
ECHDC1-212ENST00000461239 MT1EP04732 61 aa2.95□□□□□ -1.94
ECHDC1-212ENST00000461239 AHNAK2Q8IVF2 5795 aa2.94□□□□□ -1.94
ECHDC1-212ENST00000461239 KRTAP19-5Q3LI72 72 aa2.93□□□□□ -1.94
ECHDC1-212ENST00000461239 TNP1P09430 55 aa2.91□□□□□ -1.94
ECHDC1-212ENST00000461239 SPRR2DP22532 72 aa2.9□□□□□ -1.95
ECHDC1-212ENST00000461239 KRTAP2-3P0C7H8 128 aa2.89□□□□□ -1.95
ECHDC1-212ENST00000461239 KRTAP2-4Q9BYR9 128 aa2.89□□□□□ -1.95
ECHDC1-212ENST00000461239 KRTAP19-3Q7Z4W3 81 aa2.87□□□□□ -1.95
ECHDC1-212ENST00000461239 DSTQ03001 7570 aaKnown RBP2.85□□□□□ -1.95
ECHDC1-212ENST00000461239 MT1LQ93083 61 aa2.84□□□□□ -1.95
ECHDC1-212ENST00000461239 KRTAP2-1Q9BYU5 128 aa2.82□□□□□ -1.96
ECHDC1-212ENST00000461239 MT1GP13640 62 aa2.81□□□□□ -1.96
ECHDC1-212ENST00000461239 KRTAP12-3P60328 96 aa2.81□□□□□ -1.96
ECHDC1-212ENST00000461239 MT1MQ8N339 61 aa2.79□□□□□ -1.96
ECHDC1-212ENST00000461239 HMCN1Q96RW7 5635 aa2.74□□□□□ -1.97
ECHDC1-212ENST00000461239 AHNAKQ09666 5890 aaKnown RBP2.7□□□□□ -1.98
ECHDC1-212ENST00000461239 MUC19Q7Z5P9 8384 aa2.67□□□□□ -1.98
ECHDC1-212ENST00000461239 KRTAP12-4P60329 112 aa2.67□□□□□ -1.98
ECHDC1-212ENST00000461239 KRTAP5-10Q6L8G5 202 aa2.57□□□□□ -2
ECHDC1-212ENST00000461239 KRTAP5-7Q6L8G8 165 aa2.57□□□□□ -2
ECHDC1-212ENST00000461239 MUC5BQ9HC84 5762 aaPredicted RBP2.55□□□□□ -2
ECHDC1-212ENST00000461239 MT4P47944 62 aa2.53□□□□□ -2
ECHDC1-212ENST00000461239 SYNE1Q8NF91 8797 aaKnown RBP2.47□□□□□ -2.01
ECHDC1-212ENST00000461239 MUC5ACP98088 5654 aa2.44□□□□□ -2.02
ECHDC1-212ENST00000461239 INE1O15225 51 aa2.44□□□□□ -2.02
ECHDC1-212ENST00000461239 KRTAP20-2Q3LI61 65 aa2.43□□□□□ -2.02
ECHDC1-212ENST00000461239 KRTAP6-1Q3LI64 71 aa2.41□□□□□ -2.02
ECHDC1-212ENST00000461239 MT1AP04731 61 aa2.39□□□□□ -2.03
ECHDC1-212ENST00000461239 KRTAP6-2Q3LI66 62 aa2.25□□□□□ -2.05
ECHDC1-212ENST00000461239 KRTAP21-2Q3LI59 83 aa2.23□□□□□ -2.05
ECHDC1-212ENST00000461239 PRM1P04553 51 aa1.63□□□□□ -2.15
ECHDC1-212ENST00000461239 PHGR1C9JFL3 82 aa1.53□□□□□ -2.16
ECHDC1-212ENST00000461239 MUC16Q8WXI7 14507 aa1.14□□□□□ -2.23
ECHDC1-212ENST00000461239 KRTAP21-1Q3LI58 79 aa1.14□□□□□ -2.23
Retrieved 78 of 20,778 RNA–protein pairs in 112.2 ms