RNA–Protein interactions for RNA: ENST00000461115.5

IFT88-204, Transcript of intraflagellar transport 88, humanhuman

TSL 2

Gene IFT88, Length 1,440 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT88-204ENST00000461115 KRTAP5-11Q6L8G4 156 aa4.46□□□□□ -1.69
IFT88-204ENST00000461115 LCE1EQ5T753 118 aa4.44□□□□□ -1.7
IFT88-204ENST00000461115 USH2AO75445 5202 aa4.39□□□□□ -1.71
IFT88-204ENST00000461115 PRO2289Q9P1D8 64 aa4.38□□□□□ -1.71
IFT88-204ENST00000461115 KRTAP8-1Q8IUC2 63 aa4.29□□□□□ -1.72
IFT88-204ENST00000461115 LCE3AQ5TA76 89 aa4.29□□□□□ -1.72
IFT88-204ENST00000461115 KRTAP10-12P60413 245 aa4.28□□□□□ -1.72
IFT88-204ENST00000461115 KRTAP19-6Q3LI70 58 aa4.22□□□□□ -1.73
IFT88-204ENST00000461115 SSPOA2VEC9 5147 aa4.2□□□□□ -1.74
IFT88-204ENST00000461115 KRTAP12-3P60328 96 aa4.12□□□□□ -1.75
IFT88-204ENST00000461115 SPRR5A0A1B0GTR4 108 aa4.12□□□□□ -1.75
IFT88-204ENST00000461115 KRTAP5-9P26371 169 aa4.06□□□□□ -1.76
IFT88-204ENST00000461115 KRTAP19-5Q3LI72 72 aa4.04□□□□□ -1.76
IFT88-204ENST00000461115 KMT2DO14686 5537 aa4.03□□□□□ -1.76
IFT88-204ENST00000461115 KRTAP19-7Q3SYF9 63 aa4.02□□□□□ -1.77
IFT88-204ENST00000461115 FCGBPQ9Y6R7 5405 aaPredicted RBP4.01□□□□□ -1.77
IFT88-204ENST00000461115 FSIP2Q5CZC0 6907 aa4□□□□□ -1.77
IFT88-204ENST00000461115 KRTAP5-1Q6L8H4 278 aa3.95□□□□□ -1.78
IFT88-204ENST00000461115 KRTAP5-4Q6L8H1 288 aa3.93□□□□□ -1.78
IFT88-204ENST00000461115 MT1EP04732 61 aa3.92□□□□□ -1.78
IFT88-204ENST00000461115 NDUFAF8A1L188 74 aa3.9□□□□□ -1.78
IFT88-204ENST00000461115 KRTAP9-6A8MVA2 160 aa3.89□□□□□ -1.79
IFT88-204ENST00000461115 LUZP6Q538Z0 58 aa3.89□□□□□ -1.79
IFT88-204ENST00000461115 LCE3CQ5T5A8 94 aa3.88□□□□□ -1.79
IFT88-204ENST00000461115 KRTAP4-4Q9BYR3 166 aa3.87□□□□□ -1.79
IFT88-204ENST00000461115 MT1LQ93083 61 aa3.86□□□□□ -1.79
IFT88-204ENST00000461115 LCE1FQ5T754 118 aa3.85□□□□□ -1.79
IFT88-204ENST00000461115 CRCT1Q9UGL9 99 aa3.81□□□□□ -1.8
IFT88-204ENST00000461115 MACF1Q9UPN3 7388 aaKnown RBP3.76□□□□□ -1.81
IFT88-204ENST00000461115 MT1GP13640 62 aa3.73□□□□□ -1.81
IFT88-204ENST00000461115 KRTAP19-3Q7Z4W3 81 aa3.73□□□□□ -1.81
IFT88-204ENST00000461115 MUC12Q9UKN1 5478 aa3.69□□□□□ -1.82
IFT88-204ENST00000461115 MT1MQ8N339 61 aa3.68□□□□□ -1.82
IFT88-204ENST00000461115 SPRR2FQ96RM1 72 aa3.66□□□□□ -1.82
IFT88-204ENST00000461115 SYNE2Q8WXH0 6885 aaKnown RBP3.66□□□□□ -1.82
IFT88-204ENST00000461115 KRTAP4-3Q9BYR4 195 aa3.55□□□□□ -1.84
IFT88-204ENST00000461115 KRTAP6-3Q3LI67 103 aa3.54□□□□□ -1.84
IFT88-204ENST00000461115 MDN1Q9NU22 5596 aa3.52□□□□□ -1.85
IFT88-204ENST00000461115 KRTAP2-3P0C7H8 128 aa3.52□□□□□ -1.85
IFT88-204ENST00000461115 KRTAP2-4Q9BYR9 128 aa3.52□□□□□ -1.85
IFT88-204ENST00000461115 KRTAP2-1Q9BYU5 128 aa3.52□□□□□ -1.85
IFT88-204ENST00000461115 SPRR2EP22531 72 aa3.44□□□□□ -1.86
IFT88-204ENST00000461115 SPRR2BP35325 72 aa3.44□□□□□ -1.86
IFT88-204ENST00000461115 SPRR2AP35326 72 aa3.44□□□□□ -1.86
IFT88-204ENST00000461115 OBSCNQ5VST9 7968 aa3.41□□□□□ -1.86
IFT88-204ENST00000461115 KRTAP5-2Q701N4 177 aa3.39□□□□□ -1.87
IFT88-204ENST00000461115 DSTQ03001 7570 aaKnown RBP3.38□□□□□ -1.87
IFT88-204ENST00000461115 NEBP20929 6669 aa3.37□□□□□ -1.87
IFT88-204ENST00000461115 KRTAP5-5Q701N2 237 aaPredicted RBP3.36□□□□□ -1.87
IFT88-204ENST00000461115 LCE3EQ5T5B0 92 aa3.35□□□□□ -1.87
IFT88-204ENST00000461115 SPRR2DP22532 72 aa3.31□□□□□ -1.88
IFT88-204ENST00000461115 INE1O15225 51 aa3.3□□□□□ -1.88
IFT88-204ENST00000461115 MT1AP04731 61 aa3.29□□□□□ -1.88
IFT88-204ENST00000461115 KRTAP6-1Q3LI64 71 aa3.23□□□□□ -1.89
IFT88-204ENST00000461115 SYNE1Q8NF91 8797 aaKnown RBP3.15□□□□□ -1.91
IFT88-204ENST00000461115 KRTAP20-1Q3LI63 56 aa3.06□□□□□ -1.92
IFT88-204ENST00000461115 KRTAP12-4P60329 112 aa3□□□□□ -1.93
IFT88-204ENST00000461115 KRTAP5-8O75690 187 aa2.97□□□□□ -1.93
IFT88-204ENST00000461115 KRTAP6-2Q3LI66 62 aa2.93□□□□□ -1.94
IFT88-204ENST00000461115 LCE1CQ5T751 118 aa2.92□□□□□ -1.94
IFT88-204ENST00000461115 LCE1BQ5T7P3 118 aa2.92□□□□□ -1.94
IFT88-204ENST00000461115 LCE3DQ9BYE3 92 aa2.92□□□□□ -1.94
IFT88-204ENST00000461115 KRTAP20-2Q3LI61 65 aa2.88□□□□□ -1.95
IFT88-204ENST00000461115 MT4P47944 62 aa2.84□□□□□ -1.96
IFT88-204ENST00000461115 HMCN1Q96RW7 5635 aa2.81□□□□□ -1.96
IFT88-204ENST00000461115 GPR98Q8WXG9 6306 aa2.71□□□□□ -1.98
IFT88-204ENST00000461115 AHNAK2Q8IVF2 5795 aa2.6□□□□□ -1.99
IFT88-204ENST00000461115 PRM1P04553 51 aa2.52□□□□□ -2.01
IFT88-204ENST00000461115 KRTAP5-10Q6L8G5 202 aa2.46□□□□□ -2.02
IFT88-204ENST00000461115 MUC5ACP98088 5654 aa2.43□□□□□ -2.02
IFT88-204ENST00000461115 KRTAP5-7Q6L8G8 165 aa2.41□□□□□ -2.02
IFT88-204ENST00000461115 MUC19Q7Z5P9 8384 aa2.26□□□□□ -2.05
IFT88-204ENST00000461115 MUC5BQ9HC84 5762 aaPredicted RBP2.18□□□□□ -2.06
IFT88-204ENST00000461115 AHNAKQ09666 5890 aaKnown RBP2.17□□□□□ -2.06
IFT88-204ENST00000461115 KRTAP21-2Q3LI59 83 aa2.16□□□□□ -2.06
IFT88-204ENST00000461115 PHGR1C9JFL3 82 aa1.81□□□□□ -2.12
IFT88-204ENST00000461115 KRTAP21-1Q3LI58 79 aa1.64□□□□□ -2.15
IFT88-204ENST00000461115 MUC16Q8WXI7 14507 aa1.2□□□□□ -2.22
Retrieved 78 of 20,778 RNA–protein pairs in 73.1 ms