RNA–Protein interactions for RNA: ENST00000461041.1

SNAPC3-204, Transcript of small nuclear RNA activating complex polypeptide 3, humanhuman

TSL 2

Gene SNAPC3, Length 403 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC3-204ENST00000461041 KRTAP19-4Q3LI73 84 aa7.33□□□□□ -1.24
SNAPC3-204ENST00000461041 KRTAP19-3Q7Z4W3 81 aa7.33□□□□□ -1.24
SNAPC3-204ENST00000461041 LCE5AQ5TCM9 118 aa7.31□□□□□ -1.24
SNAPC3-204ENST00000461041 KRTAP2-2Q9BYT5 123 aa7.31□□□□□ -1.24
SNAPC3-204ENST00000461041 KRTAP2-1Q9BYU5 128 aa7.31□□□□□ -1.24
SNAPC3-204ENST00000461041 A6NED7 52 aa7.29□□□□□ -1.24
SNAPC3-204ENST00000461041 LCE3BQ5TA77 95 aa7.29□□□□□ -1.24
SNAPC3-204ENST00000461041 MT1GP13640 62 aa7.18□□□□□ -1.26
SNAPC3-204ENST00000461041 KRTAP25-1Q3LHN0 102 aa7.18□□□□□ -1.26
SNAPC3-204ENST00000461041 MT1LQ93083 61 aa7.16□□□□□ -1.26
SNAPC3-204ENST00000461041 PP632Q6XCG6 107 aa7.12□□□□□ -1.27
SNAPC3-204ENST00000461041 KRTAP9-9Q9BYP9 154 aa7.1□□□□□ -1.27
SNAPC3-204ENST00000461041 KRTAP9-4Q9BYQ2 154 aa7.1□□□□□ -1.27
SNAPC3-204ENST00000461041 KRTAP12-3P60328 96 aa7.08□□□□□ -1.28
SNAPC3-204ENST00000461041 MT1MQ8N339 61 aa7.07□□□□□ -1.28
SNAPC3-204ENST00000461041 LCE4AQ5TA78 99 aa7.05□□□□□ -1.28
SNAPC3-204ENST00000461041 CDC42SE1Q9NRR8 79 aa7□□□□□ -1.29
SNAPC3-204ENST00000461041 DSTQ03001 7570 aaKnown RBP6.93□□□□□ -1.3
SNAPC3-204ENST00000461041 KRTAP23-1A1A580 65 aa6.92□□□□□ -1.3
SNAPC3-204ENST00000461041 ROMO1P60602 79 aa6.9□□□□□ -1.3
SNAPC3-204ENST00000461041 KRTAP4-3Q9BYR4 195 aa6.9□□□□□ -1.3
SNAPC3-204ENST00000461041 SVIPQ8NHG7 77 aa6.87□□□□□ -1.31
SNAPC3-204ENST00000461041 KRTAP4-7Q9BYR0 210 aa6.83□□□□□ -1.32
SNAPC3-204ENST00000461041 LCE1DQ5T752 114 aa6.8□□□□□ -1.32
SNAPC3-204ENST00000461041 KRTAP4-9Q9BYQ8 210 aa6.71□□□□□ -1.34
SNAPC3-204ENST00000461041 KRTAP15-1Q3LI76 137 aa6.7□□□□□ -1.34
SNAPC3-204ENST00000461041 KRTAP5-4Q6L8H1 288 aa6.59□□□□□ -1.35
SNAPC3-204ENST00000461041 MT4P47944 62 aa6.55□□□□□ -1.36
SNAPC3-204ENST00000461041 LCE3CQ5T5A8 94 aa6.54□□□□□ -1.36
SNAPC3-204ENST00000461041 BRK1Q8WUW1 75 aa6.53□□□□□ -1.36
SNAPC3-204ENST00000461041 KRTAP5-5Q701N2 237 aaPredicted RBP6.46□□□□□ -1.38
SNAPC3-204ENST00000461041 KRTAP4-11Q9BYQ6 195 aa6.39□□□□□ -1.39
SNAPC3-204ENST00000461041 HMCN1Q96RW7 5635 aa6.34□□□□□ -1.39
SNAPC3-204ENST00000461041 KRTAP4-2Q9BYR5 136 aa6.33□□□□□ -1.4
SNAPC3-204ENST00000461041 KRTAP12-4P60329 112 aa6.22□□□□□ -1.41
SNAPC3-204ENST00000461041 SPRR5A0A1B0GTR4 108 aa6.2□□□□□ -1.42
SNAPC3-204ENST00000461041 KRTAP20-2Q3LI61 65 aa6.2□□□□□ -1.42
SNAPC3-204ENST00000461041 KRTAP9-6A8MVA2 160 aa6.18□□□□□ -1.42
SNAPC3-204ENST00000461041 PMAIP1Q13794 54 aa6.15□□□□□ -1.42
SNAPC3-204ENST00000461041 SYNE1Q8NF91 8797 aaKnown RBP6.11□□□□□ -1.43
SNAPC3-204ENST00000461041 MT1AP04731 61 aa6.1□□□□□ -1.43
SNAPC3-204ENST00000461041 GPR98Q8WXG9 6306 aa6.08□□□□□ -1.44
SNAPC3-204ENST00000461041 KRTAP6-1Q3LI64 71 aa6.05□□□□□ -1.44
SNAPC3-204ENST00000461041 KRTAP5-3Q6L8H2 238 aa6.01□□□□□ -1.45
SNAPC3-204ENST00000461041 AHNAK2Q8IVF2 5795 aa6.01□□□□□ -1.45
SNAPC3-204ENST00000461041 KRTAP5-10Q6L8G5 202 aa5.99□□□□□ -1.45
SNAPC3-204ENST00000461041 PRAC1Q96KF2 57 aa5.88□□□□□ -1.47
SNAPC3-204ENST00000461041 PRO0628Q9UI54 55 aa5.87□□□□□ -1.47
SNAPC3-204ENST00000461041 KRTAP5-2Q701N4 177 aa5.82□□□□□ -1.48
SNAPC3-204ENST00000461041 KRTAP6-2Q3LI66 62 aa5.73□□□□□ -1.49
SNAPC3-204ENST00000461041 KRTAP5-7Q6L8G8 165 aa5.72□□□□□ -1.49
SNAPC3-204ENST00000461041 A0A0A0MQY5 61 aa5.63□□□□□ -1.51
SNAPC3-204ENST00000461041 KTN1-AS1Q86SY8 53 aa5.58□□□□□ -1.52
SNAPC3-204ENST00000461041 MT3P25713 68 aa5.56□□□□□ -1.52
SNAPC3-204ENST00000461041 KRTAP5-8O75690 187 aa5.41□□□□□ -1.54
SNAPC3-204ENST00000461041 OBSCNQ5VST9 7968 aa5.26□□□□□ -1.57
SNAPC3-204ENST00000461041 KRTAP5-1Q6L8H4 278 aa5.17□□□□□ -1.58
SNAPC3-204ENST00000461041 LCE1EQ5T753 118 aa5.04□□□□□ -1.6
SNAPC3-204ENST00000461041 MUC5ACP98088 5654 aa4.92□□□□□ -1.62
SNAPC3-204ENST00000461041 LUZP6Q538Z0 58 aa4.91□□□□□ -1.62
SNAPC3-204ENST00000461041 MUC5BQ9HC84 5762 aaPredicted RBP4.87□□□□□ -1.63
SNAPC3-204ENST00000461041 AHNAKQ09666 5890 aaKnown RBP4.81□□□□□ -1.64
SNAPC3-204ENST00000461041 LCE3DQ9BYE3 92 aa4.77□□□□□ -1.65
SNAPC3-204ENST00000461041 LCE1BQ5T7P3 118 aa4.74□□□□□ -1.65
SNAPC3-204ENST00000461041 LCE1CQ5T751 118 aa4.68□□□□□ -1.66
SNAPC3-204ENST00000461041 LCE3EQ5T5B0 92 aa4.53□□□□□ -1.68
SNAPC3-204ENST00000461041 LCE1FQ5T754 118 aa4.47□□□□□ -1.69
SNAPC3-204ENST00000461041 NDUFAF8A1L188 74 aa4.42□□□□□ -1.7
SNAPC3-204ENST00000461041 KRTAP5-11Q6L8G4 156 aa4.32□□□□□ -1.72
SNAPC3-204ENST00000461041 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.29□□□□□ -1.72
SNAPC3-204ENST00000461041 KRTAP21-2Q3LI59 83 aa3.98□□□□□ -1.77
SNAPC3-204ENST00000461041 PHGR1C9JFL3 82 aa3.63□□□□□ -1.83
SNAPC3-204ENST00000461041 KRTAP4-4Q9BYR3 166 aa3.61□□□□□ -1.83
SNAPC3-204ENST00000461041 PRM1P04553 51 aa3.55□□□□□ -1.84
SNAPC3-204ENST00000461041 INE1O15225 51 aa3.36□□□□□ -1.87
SNAPC3-204ENST00000461041 MUC19Q7Z5P9 8384 aa3.24□□□□□ -1.89
SNAPC3-204ENST00000461041 KRTAP21-1Q3LI58 79 aa2.63□□□□□ -1.99
SNAPC3-204ENST00000461041 MUC16Q8WXI7 14507 aa2.37□□□□□ -2.03
Retrieved 78 of 20,778 RNA–protein pairs in 108.3 ms