RNA–Protein interactions for RNA: ENST00000460928.1

ATPAF1-203, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2

Gene ATPAF1, Length 869 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-203ENST00000460928 H1FX-AS1Q4G0G2 97 aa2.46□□□□□ -2.02
ATPAF1-203ENST00000460928 RPL37P61927 97 aaKnown RBP2.44□□□□□ -2.02
ATPAF1-203ENST00000460928 CRIPTQ9P021 101 aa2.44□□□□□ -2.02
ATPAF1-203ENST00000460928 FLGP20930 4061 aaPredicted RBP2.41□□□□□ -2.02
ATPAF1-203ENST00000460928 USH2AO75445 5202 aa2.4□□□□□ -2.03
ATPAF1-203ENST00000460928 KRTAP19-2Q3LHN2 52 aa2.4□□□□□ -2.03
ATPAF1-203ENST00000460928 PRO2289Q9P1D8 64 aa2.4□□□□□ -2.03
ATPAF1-203ENST00000460928 FCGBPQ9Y6R7 5405 aaPredicted RBP2.4□□□□□ -2.03
ATPAF1-203ENST00000460928 KRTAP20-1Q3LI63 56 aa2.39□□□□□ -2.03
ATPAF1-203ENST00000460928 SYNE2Q8WXH0 6885 aaKnown RBP2.37□□□□□ -2.03
ATPAF1-203ENST00000460928 PLAC4Q8WY50 150 aa2.36□□□□□ -2.03
ATPAF1-203ENST00000460928 MACF1Q9UPN3 7388 aaKnown RBP2.33□□□□□ -2.04
ATPAF1-203ENST00000460928 MT1HP80294 61 aa2.33□□□□□ -2.04
ATPAF1-203ENST00000460928 NEBP20929 6669 aa2.32□□□□□ -2.04
ATPAF1-203ENST00000460928 LCE3DQ9BYE3 92 aa2.32□□□□□ -2.04
ATPAF1-203ENST00000460928 INE1O15225 51 aa2.31□□□□□ -2.04
ATPAF1-203ENST00000460928 KRTAP6-3Q3LI67 103 aa2.3□□□□□ -2.04
ATPAF1-203ENST00000460928 PP632Q6XCG6 107 aa2.3□□□□□ -2.04
ATPAF1-203ENST00000460928 M0R2T5 61 aa2.28□□□□□ -2.04
ATPAF1-203ENST00000460928 C10orf95Q9H7T3 257 aa2.28□□□□□ -2.04
ATPAF1-203ENST00000460928 SPRR5A0A1B0GTR4 108 aa2.26□□□□□ -2.05
ATPAF1-203ENST00000460928 R4GN34 69 aa2.26□□□□□ -2.05
ATPAF1-203ENST00000460928 S4R3F8 94 aa2.25□□□□□ -2.05
ATPAF1-203ENST00000460928 GPR98Q8WXG9 6306 aa2.24□□□□□ -2.05
ATPAF1-203ENST00000460928 MUC12Q9UKN1 5478 aa2.23□□□□□ -2.05
ATPAF1-203ENST00000460928 MT2AP02795 61 aa2.22□□□□□ -2.05
ATPAF1-203ENST00000460928 MT1FP04733 61 aa2.21□□□□□ -2.06
ATPAF1-203ENST00000460928 KMT2DO14686 5537 aa2.2□□□□□ -2.06
ATPAF1-203ENST00000460928 MUC19Q7Z5P9 8384 aa2.17□□□□□ -2.06
ATPAF1-203ENST00000460928 KRTAP2-3P0C7H8 128 aa2.17□□□□□ -2.06
ATPAF1-203ENST00000460928 KRTAP10-10P60014 251 aa2.17□□□□□ -2.06
ATPAF1-203ENST00000460928 KRTAP2-4Q9BYR9 128 aa2.17□□□□□ -2.06
ATPAF1-203ENST00000460928 M0QZ58 72 aa2.16□□□□□ -2.06
ATPAF1-203ENST00000460928 KRTAP13-4Q3LI77 160 aa2.16□□□□□ -2.06
ATPAF1-203ENST00000460928 KRTAP12-1P59990 96 aa2.15□□□□□ -2.07
ATPAF1-203ENST00000460928 A0A0D9SG42 100 aa2.14□□□□□ -2.07
ATPAF1-203ENST00000460928 KRTAP5-7Q6L8G8 165 aa2.14□□□□□ -2.07
ATPAF1-203ENST00000460928 MDN1Q9NU22 5596 aa2.13□□□□□ -2.07
ATPAF1-203ENST00000460928 KRTAP19-6Q3LI70 58 aa2.1□□□□□ -2.07
ATPAF1-203ENST00000460928 KRTAP2-1Q9BYU5 128 aa2.08□□□□□ -2.08
ATPAF1-203ENST00000460928 MT1BP07438 61 aa2.05□□□□□ -2.08
ATPAF1-203ENST00000460928 SPRR2GQ9BYE4 73 aa2.03□□□□□ -2.08
ATPAF1-203ENST00000460928 KRTAP19-8Q3LI54 63 aa2.01□□□□□ -2.09
ATPAF1-203ENST00000460928 AHNAK2Q8IVF2 5795 aa1.96□□□□□ -2.1
ATPAF1-203ENST00000460928 SPRR2EP22531 72 aa1.95□□□□□ -2.1
ATPAF1-203ENST00000460928 SPRR2BP35325 72 aa1.95□□□□□ -2.1
ATPAF1-203ENST00000460928 SPRR2AP35326 72 aa1.95□□□□□ -2.1
ATPAF1-203ENST00000460928 MT1XP80297 61 aa1.93□□□□□ -2.1
ATPAF1-203ENST00000460928 TNP1P09430 55 aa1.92□□□□□ -2.1
ATPAF1-203ENST00000460928 SPRR2DP22532 72 aa1.9□□□□□ -2.11
ATPAF1-203ENST00000460928 KRTAP21-2Q3LI59 83 aa1.87□□□□□ -2.11
ATPAF1-203ENST00000460928 KRTAP5-10Q6L8G5 202 aa1.87□□□□□ -2.11
ATPAF1-203ENST00000460928 SPRR2FQ96RM1 72 aa1.87□□□□□ -2.11
ATPAF1-203ENST00000460928 HMCN1Q96RW7 5635 aa1.85□□□□□ -2.11
ATPAF1-203ENST00000460928 DSTQ03001 7570 aaKnown RBP1.84□□□□□ -2.11
ATPAF1-203ENST00000460928 KRTAP8-1Q8IUC2 63 aa1.79□□□□□ -2.12
ATPAF1-203ENST00000460928 AHNAKQ09666 5890 aaKnown RBP1.75□□□□□ -2.13
ATPAF1-203ENST00000460928 KRTAP12-3P60328 96 aa1.73□□□□□ -2.13
ATPAF1-203ENST00000460928 KRTAP19-5Q3LI72 72 aa1.73□□□□□ -2.13
ATPAF1-203ENST00000460928 KRTAP19-7Q3SYF9 63 aa1.73□□□□□ -2.13
ATPAF1-203ENST00000460928 MT1EP04732 61 aa1.7□□□□□ -2.14
ATPAF1-203ENST00000460928 MT4P47944 62 aa1.7□□□□□ -2.14
ATPAF1-203ENST00000460928 MUC5ACP98088 5654 aa1.65□□□□□ -2.14
ATPAF1-203ENST00000460928 MUC5BQ9HC84 5762 aaPredicted RBP1.65□□□□□ -2.15
ATPAF1-203ENST00000460928 KRTAP19-3Q7Z4W3 81 aa1.64□□□□□ -2.15
ATPAF1-203ENST00000460928 MT1LQ93083 61 aa1.64□□□□□ -2.15
ATPAF1-203ENST00000460928 KRTAP12-4P60329 112 aa1.63□□□□□ -2.15
ATPAF1-203ENST00000460928 MT1MQ8N339 61 aa1.62□□□□□ -2.15
ATPAF1-203ENST00000460928 MT1GP13640 62 aa1.59□□□□□ -2.15
ATPAF1-203ENST00000460928 SYNE1Q8NF91 8797 aaKnown RBP1.49□□□□□ -2.17
ATPAF1-203ENST00000460928 KRTAP20-2Q3LI61 65 aa1.46□□□□□ -2.18
ATPAF1-203ENST00000460928 KRTAP6-1Q3LI64 71 aa1.41□□□□□ -2.18
ATPAF1-203ENST00000460928 MT1AP04731 61 aa1.38□□□□□ -2.19
ATPAF1-203ENST00000460928 PRM1P04553 51 aa1.32□□□□□ -2.2
ATPAF1-203ENST00000460928 KRTAP6-2Q3LI66 62 aa1.32□□□□□ -2.2
ATPAF1-203ENST00000460928 PHGR1C9JFL3 82 aa1.14□□□□□ -2.23
ATPAF1-203ENST00000460928 KRTAP21-1Q3LI58 79 aa0.95□□□□□ -2.26
ATPAF1-203ENST00000460928 MUC16Q8WXI7 14507 aa0.9□□□□□ -2.26
Retrieved 78 of 20,778 RNA–protein pairs in 63.7 ms