RNA–Protein interactions for RNA: ENST00000460925.1

SF3A3-202, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 2

Gene SF3A3, Length 793 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-202ENST00000460925 KRTAP5-4Q6L8H1 288 aa2.31□□□□□ -2.04
SF3A3-202ENST00000460925 S4R3F8 94 aa2.31□□□□□ -2.04
SF3A3-202ENST00000460925 KRTAP4-4Q9BYR3 166 aa2.28□□□□□ -2.04
SF3A3-202ENST00000460925 MT2AP02795 61 aa2.26□□□□□ -2.05
SF3A3-202ENST00000460925 MT1FP04733 61 aa2.26□□□□□ -2.05
SF3A3-202ENST00000460925 KRTAP10-10P60014 251 aa2.23□□□□□ -2.05
SF3A3-202ENST00000460925 LCE3DQ9BYE3 92 aa2.22□□□□□ -2.05
SF3A3-202ENST00000460925 USH2AO75445 5202 aa2.18□□□□□ -2.06
SF3A3-202ENST00000460925 PP632Q6XCG6 107 aa2.15□□□□□ -2.07
SF3A3-202ENST00000460925 KRTAP13-4Q3LI77 160 aa2.14□□□□□ -2.07
SF3A3-202ENST00000460925 LCE3AQ5TA76 89 aa2.14□□□□□ -2.07
SF3A3-202ENST00000460925 SSPOA2VEC9 5147 aa2.12□□□□□ -2.07
SF3A3-202ENST00000460925 M0QZ58 72 aa2.12□□□□□ -2.07
SF3A3-202ENST00000460925 SPRR2GQ9BYE4 73 aa2.12□□□□□ -2.07
SF3A3-202ENST00000460925 MT1BP07438 61 aa2.11□□□□□ -2.07
SF3A3-202ENST00000460925 A0A0D9SG42 100 aa2.08□□□□□ -2.08
SF3A3-202ENST00000460925 KRTAP19-8Q3LI54 63 aa2.08□□□□□ -2.08
SF3A3-202ENST00000460925 FCGBPQ9Y6R7 5405 aaPredicted RBP2.07□□□□□ -2.08
SF3A3-202ENST00000460925 CRCT1Q9UGL9 99 aa2.06□□□□□ -2.08
SF3A3-202ENST00000460925 FSIP2Q5CZC0 6907 aa2.05□□□□□ -2.08
SF3A3-202ENST00000460925 KRTAP12-1P59990 96 aa2.02□□□□□ -2.09
SF3A3-202ENST00000460925 KRTAP19-6Q3LI70 58 aa2.02□□□□□ -2.09
SF3A3-202ENST00000460925 KRTAP5-5Q701N2 237 aaPredicted RBP2.02□□□□□ -2.09
SF3A3-202ENST00000460925 OBSCNQ5VST9 7968 aa2.02□□□□□ -2.09
SF3A3-202ENST00000460925 KMT2DO14686 5537 aa2.01□□□□□ -2.09
SF3A3-202ENST00000460925 MT1XP80297 61 aa2.01□□□□□ -2.09
SF3A3-202ENST00000460925 KRTAP5-2Q701N4 177 aa1.99□□□□□ -2.09
SF3A3-202ENST00000460925 KRTAP4-3Q9BYR4 195 aa1.95□□□□□ -2.1
SF3A3-202ENST00000460925 KRTAP6-3Q3LI67 103 aa1.93□□□□□ -2.1
SF3A3-202ENST00000460925 MUC12Q9UKN1 5478 aa1.89□□□□□ -2.11
SF3A3-202ENST00000460925 MACF1Q9UPN3 7388 aaKnown RBP1.87□□□□□ -2.11
SF3A3-202ENST00000460925 LCE1CQ5T751 118 aa1.87□□□□□ -2.11
SF3A3-202ENST00000460925 LCE1BQ5T7P3 118 aa1.87□□□□□ -2.11
SF3A3-202ENST00000460925 MDN1Q9NU22 5596 aa1.85□□□□□ -2.11
SF3A3-202ENST00000460925 KRTAP8-1Q8IUC2 63 aa1.84□□□□□ -2.11
SF3A3-202ENST00000460925 TNP1P09430 55 aa1.83□□□□□ -2.12
SF3A3-202ENST00000460925 SPRR2FQ96RM1 72 aa1.82□□□□□ -2.12
SF3A3-202ENST00000460925 KRTAP19-5Q3LI72 72 aa1.8□□□□□ -2.12
SF3A3-202ENST00000460925 SYNE2Q8WXH0 6885 aaKnown RBP1.79□□□□□ -2.12
SF3A3-202ENST00000460925 KRTAP19-7Q3SYF9 63 aa1.79□□□□□ -2.12
SF3A3-202ENST00000460925 KRTAP5-8O75690 187 aa1.76□□□□□ -2.13
SF3A3-202ENST00000460925 MT1EP04732 61 aa1.76□□□□□ -2.13
SF3A3-202ENST00000460925 SPRR2EP22531 72 aa1.76□□□□□ -2.13
SF3A3-202ENST00000460925 SPRR2BP35325 72 aa1.76□□□□□ -2.13
SF3A3-202ENST00000460925 SPRR2AP35326 72 aa1.76□□□□□ -2.13
SF3A3-202ENST00000460925 KRTAP12-3P60328 96 aa1.76□□□□□ -2.13
SF3A3-202ENST00000460925 MT1LQ93083 61 aa1.71□□□□□ -2.14
SF3A3-202ENST00000460925 KRTAP12-4P60329 112 aa1.7□□□□□ -2.14
SF3A3-202ENST00000460925 KRTAP19-3Q7Z4W3 81 aa1.7□□□□□ -2.14
SF3A3-202ENST00000460925 SPRR2DP22532 72 aa1.69□□□□□ -2.14
SF3A3-202ENST00000460925 MT1MQ8N339 61 aa1.67□□□□□ -2.14
SF3A3-202ENST00000460925 NEBP20929 6669 aa1.66□□□□□ -2.14
SF3A3-202ENST00000460925 MT1GP13640 62 aa1.64□□□□□ -2.15
SF3A3-202ENST00000460925 KRTAP20-1Q3LI63 56 aa1.63□□□□□ -2.15
SF3A3-202ENST00000460925 DSTQ03001 7570 aaKnown RBP1.63□□□□□ -2.15
SF3A3-202ENST00000460925 HMCN1Q96RW7 5635 aa1.6□□□□□ -2.15
SF3A3-202ENST00000460925 KRTAP2-3P0C7H8 128 aa1.59□□□□□ -2.15
SF3A3-202ENST00000460925 KRTAP2-4Q9BYR9 128 aa1.59□□□□□ -2.15
SF3A3-202ENST00000460925 KRTAP2-1Q9BYU5 128 aa1.58□□□□□ -2.16
SF3A3-202ENST00000460925 KRTAP5-7Q6L8G8 165 aa1.57□□□□□ -2.16
SF3A3-202ENST00000460925 MT4P47944 62 aa1.49□□□□□ -2.17
SF3A3-202ENST00000460925 KRTAP6-1Q3LI64 71 aa1.46□□□□□ -2.18
SF3A3-202ENST00000460925 SYNE1Q8NF91 8797 aaKnown RBP1.44□□□□□ -2.18
SF3A3-202ENST00000460925 MT1AP04731 61 aa1.44□□□□□ -2.18
SF3A3-202ENST00000460925 KRTAP20-2Q3LI61 65 aa1.41□□□□□ -2.18
SF3A3-202ENST00000460925 AHNAK2Q8IVF2 5795 aa1.4□□□□□ -2.19
SF3A3-202ENST00000460925 MUC19Q7Z5P9 8384 aa1.39□□□□□ -2.19
SF3A3-202ENST00000460925 KRTAP6-2Q3LI66 62 aa1.36□□□□□ -2.19
SF3A3-202ENST00000460925 PRM1P04553 51 aa1.34□□□□□ -2.19
SF3A3-202ENST00000460925 KRTAP21-2Q3LI59 83 aa1.29□□□□□ -2.2
SF3A3-202ENST00000460925 KRTAP5-10Q6L8G5 202 aa1.27□□□□□ -2.21
SF3A3-202ENST00000460925 GPR98Q8WXG9 6306 aa1.22□□□□□ -2.21
SF3A3-202ENST00000460925 MUC5ACP98088 5654 aa1.18□□□□□ -2.22
SF3A3-202ENST00000460925 MUC5BQ9HC84 5762 aaPredicted RBP1.1□□□□□ -2.23
SF3A3-202ENST00000460925 AHNAKQ09666 5890 aaKnown RBP1.04□□□□□ -2.24
SF3A3-202ENST00000460925 KRTAP21-1Q3LI58 79 aa1□□□□□ -2.25
SF3A3-202ENST00000460925 PHGR1C9JFL3 82 aa0.82□□□□□ -2.28
SF3A3-202ENST00000460925 MUC16Q8WXI7 14507 aa0.72□□□□□ -2.29
Retrieved 78 of 20,778 RNA–protein pairs in 78 ms