RNA–Protein interactions for RNA: ENST00000460739.5

SOX2-OT-201, SOX2 overlapping transcript, humanhuman

TSL 4 BASIC

Gene SOX2-OT, Length 609 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-201ENST00000460739 LCE3AQ5TA76 89 aa4.17□□□□□ -1.74
SOX2-OT-201ENST00000460739 C10orf95Q9H7T3 257 aa4.17□□□□□ -1.74
SOX2-OT-201ENST00000460739 TNP1P09430 55 aa4.16□□□□□ -1.74
SOX2-OT-201ENST00000460739 LCE1DQ5T752 114 aa4.16□□□□□ -1.74
SOX2-OT-201ENST00000460739 ANAPC13Q9BS18 74 aa4.16□□□□□ -1.74
SOX2-OT-201ENST00000460739 LCE4AQ5TA78 99 aa4.14□□□□□ -1.75
SOX2-OT-201ENST00000460739 PRR15LQ9BU68 103 aa4.11□□□□□ -1.75
SOX2-OT-201ENST00000460739 HMCN1Q96RW7 5635 aa4.1□□□□□ -1.75
SOX2-OT-201ENST00000460739 CCDC179H3BU77 68 aa4.1□□□□□ -1.75
SOX2-OT-201ENST00000460739 MT4P47944 62 aa4.09□□□□□ -1.75
SOX2-OT-201ENST00000460739 ATP5EP56381 51 aaPredicted RBP4.09□□□□□ -1.75
SOX2-OT-201ENST00000460739 KRTAP4-3Q9BYR4 195 aa4.09□□□□□ -1.75
SOX2-OT-201ENST00000460739 KRTAP5-4Q6L8H1 288 aa4.06□□□□□ -1.76
SOX2-OT-201ENST00000460739 LINC01558Q9Y6Z2 57 aa4.06□□□□□ -1.76
SOX2-OT-201ENST00000460739 KRTAP4-2Q9BYR5 136 aa4.04□□□□□ -1.76
SOX2-OT-201ENST00000460739 KRTAP12-3P60328 96 aa4.01□□□□□ -1.77
SOX2-OT-201ENST00000460739 AHNAK2Q8IVF2 5795 aa3.99□□□□□ -1.77
SOX2-OT-201ENST00000460739 UQCR11O14957 56 aa3.98□□□□□ -1.77
SOX2-OT-201ENST00000460739 PCP4P48539 62 aa3.97□□□□□ -1.77
SOX2-OT-201ENST00000460739 TMEM258P61165 79 aa3.94□□□□□ -1.78
SOX2-OT-201ENST00000460739 KRTAP5-10Q6L8G5 202 aa3.91□□□□□ -1.78
SOX2-OT-201ENST00000460739 KRTAP25-1Q3LHN0 102 aa3.89□□□□□ -1.79
SOX2-OT-201ENST00000460739 KRTAP5-5Q701N2 237 aaPredicted RBP3.88□□□□□ -1.79
SOX2-OT-201ENST00000460739 MIR22HGQ0VDD5 57 aa3.87□□□□□ -1.79
SOX2-OT-201ENST00000460739 KRTAP4-11Q9BYQ6 195 aa3.85□□□□□ -1.79
SOX2-OT-201ENST00000460739 KRTAP20-2Q3LI61 65 aa3.83□□□□□ -1.8
SOX2-OT-201ENST00000460739 KRTAP5-3Q6L8H2 238 aa3.83□□□□□ -1.8
SOX2-OT-201ENST00000460739 SPRR5A0A1B0GTR4 108 aa3.82□□□□□ -1.8
SOX2-OT-201ENST00000460739 K7ERS5 55 aa3.81□□□□□ -1.8
SOX2-OT-201ENST00000460739 KRTAP12-4P60329 112 aa3.77□□□□□ -1.81
SOX2-OT-201ENST00000460739 KRTAP5-7Q6L8G8 165 aa3.77□□□□□ -1.81
SOX2-OT-201ENST00000460739 V9GYY9 64 aa3.75□□□□□ -1.81
SOX2-OT-201ENST00000460739 A0A0A0MQY5 61 aa3.74□□□□□ -1.81
SOX2-OT-201ENST00000460739 PSPHP1O15172 72 aa3.74□□□□□ -1.81
SOX2-OT-201ENST00000460739 Q1T7F1 81 aa3.73□□□□□ -1.81
SOX2-OT-201ENST00000460739 SYNE1Q8NF91 8797 aaKnown RBP3.72□□□□□ -1.81
SOX2-OT-201ENST00000460739 KRTAP15-1Q3LI76 137 aa3.72□□□□□ -1.81
SOX2-OT-201ENST00000460739 LCE3CQ5T5A8 94 aa3.69□□□□□ -1.82
SOX2-OT-201ENST00000460739 A6NED7 52 aa3.61□□□□□ -1.83
SOX2-OT-201ENST00000460739 CDC42SE1Q9NRR8 79 aa3.6□□□□□ -1.83
SOX2-OT-201ENST00000460739 MT1AP04731 61 aa3.57□□□□□ -1.84
SOX2-OT-201ENST00000460739 KRTAP6-1Q3LI64 71 aa3.55□□□□□ -1.84
SOX2-OT-201ENST00000460739 KRTAP5-2Q701N4 177 aa3.55□□□□□ -1.84
SOX2-OT-201ENST00000460739 ROMO1P60602 79 aa3.54□□□□□ -1.84
SOX2-OT-201ENST00000460739 RPS28P62857 69 aaKnown RBP3.52□□□□□ -1.85
SOX2-OT-201ENST00000460739 KRTAP9-6A8MVA2 160 aa3.49□□□□□ -1.85
SOX2-OT-201ENST00000460739 KRTAP6-2Q3LI66 62 aa3.41□□□□□ -1.86
SOX2-OT-201ENST00000460739 KRTAP5-8O75690 187 aa3.4□□□□□ -1.87
SOX2-OT-201ENST00000460739 OBSCNQ5VST9 7968 aa3.33□□□□□ -1.88
SOX2-OT-201ENST00000460739 AHNAKQ09666 5890 aaKnown RBP3.31□□□□□ -1.88
SOX2-OT-201ENST00000460739 MUC5ACP98088 5654 aa3.31□□□□□ -1.88
SOX2-OT-201ENST00000460739 MUC5BQ9HC84 5762 aaPredicted RBP3.28□□□□□ -1.88
SOX2-OT-201ENST00000460739 MT3P25713 68 aa3.27□□□□□ -1.89
SOX2-OT-201ENST00000460739 KRTAP5-1Q6L8H4 278 aa3.19□□□□□ -1.9
SOX2-OT-201ENST00000460739 PRAC1Q96KF2 57 aa3.11□□□□□ -1.91
SOX2-OT-201ENST00000460739 LCE1EQ5T753 118 aa3.03□□□□□ -1.92
SOX2-OT-201ENST00000460739 BRK1Q8WUW1 75 aa3.01□□□□□ -1.93
SOX2-OT-201ENST00000460739 NDUFAF8A1L188 74 aa2.94□□□□□ -1.94
SOX2-OT-201ENST00000460739 LCE1BQ5T7P3 118 aa2.83□□□□□ -1.96
SOX2-OT-201ENST00000460739 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.83□□□□□ -1.96
SOX2-OT-201ENST00000460739 PMAIP1Q13794 54 aa2.82□□□□□ -1.96
SOX2-OT-201ENST00000460739 LCE1CQ5T751 118 aa2.82□□□□□ -1.96
SOX2-OT-201ENST00000460739 LCE3DQ9BYE3 92 aa2.64□□□□□ -1.99
SOX2-OT-201ENST00000460739 LCE1FQ5T754 118 aa2.63□□□□□ -1.99
SOX2-OT-201ENST00000460739 PRO0628Q9UI54 55 aa2.59□□□□□ -1.99
SOX2-OT-201ENST00000460739 KRTAP5-11Q6L8G4 156 aa2.57□□□□□ -2
SOX2-OT-201ENST00000460739 KTN1-AS1Q86SY8 53 aa2.48□□□□□ -2.01
SOX2-OT-201ENST00000460739 LCE3EQ5T5B0 92 aa2.47□□□□□ -2.01
SOX2-OT-201ENST00000460739 KRTAP21-2Q3LI59 83 aa2.35□□□□□ -2.03
SOX2-OT-201ENST00000460739 KRTAP4-4Q9BYR3 166 aa2.32□□□□□ -2.04
SOX2-OT-201ENST00000460739 LUZP6Q538Z0 58 aa2.31□□□□□ -2.04
SOX2-OT-201ENST00000460739 PHGR1C9JFL3 82 aa2.27□□□□□ -2.05
SOX2-OT-201ENST00000460739 MUC19Q7Z5P9 8384 aa2.08□□□□□ -2.08
SOX2-OT-201ENST00000460739 PRM1P04553 51 aa1.8□□□□□ -2.12
SOX2-OT-201ENST00000460739 KRTAP21-1Q3LI58 79 aa1.73□□□□□ -2.13
SOX2-OT-201ENST00000460739 MUC16Q8WXI7 14507 aa1.43□□□□□ -2.18
SOX2-OT-201ENST00000460739 INE1O15225 51 aa1.42□□□□□ -2.18
Retrieved 77 of 20,778 RNA–protein pairs in 12.4 ms