RNA–Protein interactions for RNA: ENST00000460625.1

UPK1B-202, Transcript of uroplakin 1B, humanhuman

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Gene UPK1B, Length 1,937 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1B-202ENST00000460625 KRTAP9-4Q9BYQ2 154 aa4.04□□□□□ -1.76
UPK1B-202ENST00000460625 MUC12Q9UKN1 5478 aa4.01□□□□□ -1.77
UPK1B-202ENST00000460625 KRTAP9-9Q9BYP9 154 aa3.99□□□□□ -1.77
UPK1B-202ENST00000460625 MT1EP04732 61 aa3.97□□□□□ -1.77
UPK1B-202ENST00000460625 KRTAP5-3Q6L8H2 238 aa3.97□□□□□ -1.77
UPK1B-202ENST00000460625 KRTAP4-7Q9BYR0 210 aa3.97□□□□□ -1.77
UPK1B-202ENST00000460625 LCE3BQ5TA77 95 aa3.95□□□□□ -1.78
UPK1B-202ENST00000460625 SPRR2FQ96RM1 72 aa3.93□□□□□ -1.78
UPK1B-202ENST00000460625 MDN1Q9NU22 5596 aa3.91□□□□□ -1.78
UPK1B-202ENST00000460625 KRTAP5-9P26371 169 aa3.89□□□□□ -1.79
UPK1B-202ENST00000460625 MT1LQ93083 61 aa3.88□□□□□ -1.79
UPK1B-202ENST00000460625 LUZP6Q538Z0 58 aa3.87□□□□□ -1.79
UPK1B-202ENST00000460625 LCE5AQ5TCM9 118 aa3.85□□□□□ -1.79
UPK1B-202ENST00000460625 KRTAP6-3Q3LI67 103 aa3.83□□□□□ -1.8
UPK1B-202ENST00000460625 KRTAP4-12Q9BQ66 201 aa3.83□□□□□ -1.8
UPK1B-202ENST00000460625 KRTAP19-3Q7Z4W3 81 aa3.82□□□□□ -1.8
UPK1B-202ENST00000460625 LCE3CQ5T5A8 94 aa3.79□□□□□ -1.8
UPK1B-202ENST00000460625 NDUFAF8A1L188 74 aa3.77□□□□□ -1.81
UPK1B-202ENST00000460625 LCE1AQ5T7P2 110 aa3.77□□□□□ -1.81
UPK1B-202ENST00000460625 KRTAP4-2Q9BYR5 136 aa3.76□□□□□ -1.81
UPK1B-202ENST00000460625 MT1GP13640 62 aa3.76□□□□□ -1.81
UPK1B-202ENST00000460625 NEBP20929 6669 aa3.75□□□□□ -1.81
UPK1B-202ENST00000460625 MT1MQ8N339 61 aa3.74□□□□□ -1.81
UPK1B-202ENST00000460625 SPRR2EP22531 72 aa3.74□□□□□ -1.81
UPK1B-202ENST00000460625 SPRR2BP35325 72 aa3.74□□□□□ -1.81
UPK1B-202ENST00000460625 SPRR2AP35326 72 aa3.74□□□□□ -1.81
UPK1B-202ENST00000460625 SPRR5A0A1B0GTR4 108 aa3.72□□□□□ -1.81
UPK1B-202ENST00000460625 LCE1DQ5T752 114 aa3.72□□□□□ -1.81
UPK1B-202ENST00000460625 KRTAP4-3Q9BYR4 195 aa3.72□□□□□ -1.81
UPK1B-202ENST00000460625 DSTQ03001 7570 aaKnown RBP3.7□□□□□ -1.82
UPK1B-202ENST00000460625 KRTAP4-9Q9BYQ8 210 aa3.7□□□□□ -1.82
UPK1B-202ENST00000460625 KRTAP9-6A8MVA2 160 aa3.64□□□□□ -1.83
UPK1B-202ENST00000460625 SPRR2DP22532 72 aa3.6□□□□□ -1.83
UPK1B-202ENST00000460625 KRTAP4-11Q9BYQ6 195 aa3.42□□□□□ -1.86
UPK1B-202ENST00000460625 KRTAP5-5Q701N2 237 aaPredicted RBP3.38□□□□□ -1.87
UPK1B-202ENST00000460625 KRTAP2-3P0C7H8 128 aa3.35□□□□□ -1.87
UPK1B-202ENST00000460625 KRTAP2-4Q9BYR9 128 aa3.35□□□□□ -1.87
UPK1B-202ENST00000460625 SYNE1Q8NF91 8797 aaKnown RBP3.33□□□□□ -1.88
UPK1B-202ENST00000460625 KRTAP20-1Q3LI63 56 aa3.32□□□□□ -1.88
UPK1B-202ENST00000460625 KRTAP6-1Q3LI64 71 aa3.29□□□□□ -1.88
UPK1B-202ENST00000460625 LCE1FQ5T754 118 aa3.29□□□□□ -1.88
UPK1B-202ENST00000460625 KRTAP2-2Q9BYT5 123 aa3.29□□□□□ -1.88
UPK1B-202ENST00000460625 KRTAP2-1Q9BYU5 128 aa3.29□□□□□ -1.88
UPK1B-202ENST00000460625 MT1AP04731 61 aa3.28□□□□□ -1.88
UPK1B-202ENST00000460625 KRTAP5-4Q6L8H1 288 aa3.24□□□□□ -1.89
UPK1B-202ENST00000460625 MT3P25713 68 aa3.22□□□□□ -1.89
UPK1B-202ENST00000460625 MT4P47944 62 aa3.15□□□□□ -1.9
UPK1B-202ENST00000460625 HMCN1Q96RW7 5635 aa3.13□□□□□ -1.91
UPK1B-202ENST00000460625 KRTAP12-4P60329 112 aa3.11□□□□□ -1.91
UPK1B-202ENST00000460625 KRTAP20-2Q3LI61 65 aa3.04□□□□□ -1.92
UPK1B-202ENST00000460625 KRTAP6-2Q3LI66 62 aa3.03□□□□□ -1.92
UPK1B-202ENST00000460625 KRTAP5-2Q701N4 177 aa2.93□□□□□ -1.94
UPK1B-202ENST00000460625 OBSCNQ5VST9 7968 aa2.89□□□□□ -1.95
UPK1B-202ENST00000460625 LCE3EQ5T5B0 92 aa2.85□□□□□ -1.95
UPK1B-202ENST00000460625 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.83□□□□□ -1.96
UPK1B-202ENST00000460625 AHNAK2Q8IVF2 5795 aa2.82□□□□□ -1.96
UPK1B-202ENST00000460625 LCE3DQ9BYE3 92 aa2.82□□□□□ -1.96
UPK1B-202ENST00000460625 INE1O15225 51 aa2.78□□□□□ -1.97
UPK1B-202ENST00000460625 LCE1EQ5T753 118 aa2.7□□□□□ -1.98
UPK1B-202ENST00000460625 GPR98Q8WXG9 6306 aa2.62□□□□□ -1.99
UPK1B-202ENST00000460625 KRTAP5-10Q6L8G5 202 aa2.6□□□□□ -1.99
UPK1B-202ENST00000460625 KRTAP5-1Q6L8H4 278 aa2.56□□□□□ -2
UPK1B-202ENST00000460625 KRTAP5-8O75690 187 aa2.56□□□□□ -2
UPK1B-202ENST00000460625 MUC5ACP98088 5654 aa2.53□□□□□ -2
UPK1B-202ENST00000460625 LCE1BQ5T7P3 118 aa2.46□□□□□ -2.02
UPK1B-202ENST00000460625 KRTAP5-7Q6L8G8 165 aa2.44□□□□□ -2.02
UPK1B-202ENST00000460625 LCE1CQ5T751 118 aa2.41□□□□□ -2.02
UPK1B-202ENST00000460625 PRM1P04553 51 aa2.39□□□□□ -2.03
UPK1B-202ENST00000460625 MUC5BQ9HC84 5762 aaPredicted RBP2.28□□□□□ -2.04
UPK1B-202ENST00000460625 KRTAP4-4Q9BYR3 166 aa2.27□□□□□ -2.05
UPK1B-202ENST00000460625 KRTAP5-11Q6L8G4 156 aa2.23□□□□□ -2.05
UPK1B-202ENST00000460625 KRTAP21-2Q3LI59 83 aa2.15□□□□□ -2.06
UPK1B-202ENST00000460625 AHNAKQ09666 5890 aaKnown RBP2.15□□□□□ -2.07
UPK1B-202ENST00000460625 PHGR1C9JFL3 82 aa1.84□□□□□ -2.11
UPK1B-202ENST00000460625 MUC19Q7Z5P9 8384 aa1.75□□□□□ -2.13
UPK1B-202ENST00000460625 KRTAP21-1Q3LI58 79 aa1.44□□□□□ -2.18
UPK1B-202ENST00000460625 MUC16Q8WXI7 14507 aa1.19□□□□□ -2.22
Retrieved 77 of 20,778 RNA–protein pairs in 68.1 ms