RNA–Protein interactions for RNA: ENST00000460601.5

NELFCD-201, Transcript of negative elongation factor complex member C/D, humanhuman

TSL 1 (best)

Gene NELFCD, Length 2,137 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFCD-201ENST00000460601 MT1EP04732 61 aa6.13□□□□□ -1.43
NELFCD-201ENST00000460601 SPRR2FQ96RM1 72 aa6.12□□□□□ -1.43
NELFCD-201ENST00000460601 KRTAP5-9P26371 169 aa6.02□□□□□ -1.45
NELFCD-201ENST00000460601 MDN1Q9NU22 5596 aa6□□□□□ -1.45
NELFCD-201ENST00000460601 MT1LQ93083 61 aa5.99□□□□□ -1.45
NELFCD-201ENST00000460601 KRTAP6-3Q3LI67 103 aa5.92□□□□□ -1.46
NELFCD-201ENST00000460601 KRTAP4-7Q9BYR0 210 aa5.92□□□□□ -1.46
NELFCD-201ENST00000460601 KRTAP19-3Q7Z4W3 81 aa5.9□□□□□ -1.47
NELFCD-201ENST00000460601 KRTAP9-7A8MTY7 169 aa5.86□□□□□ -1.47
NELFCD-201ENST00000460601 LCE3CQ5T5A8 94 aa5.85□□□□□ -1.47
NELFCD-201ENST00000460601 LCE1AQ5T7P2 110 aa5.84□□□□□ -1.47
NELFCD-201ENST00000460601 LCE5AQ5TCM9 118 aa5.82□□□□□ -1.48
NELFCD-201ENST00000460601 SPRR2EP22531 72 aa5.81□□□□□ -1.48
NELFCD-201ENST00000460601 SPRR2BP35325 72 aa5.81□□□□□ -1.48
NELFCD-201ENST00000460601 SPRR2AP35326 72 aa5.81□□□□□ -1.48
NELFCD-201ENST00000460601 MT1GP13640 62 aa5.8□□□□□ -1.48
NELFCD-201ENST00000460601 INE1O15225 51 aa5.8□□□□□ -1.48
NELFCD-201ENST00000460601 MT1MQ8N339 61 aa5.78□□□□□ -1.48
NELFCD-201ENST00000460601 KRTAP4-3Q9BYR4 195 aa5.78□□□□□ -1.48
NELFCD-201ENST00000460601 DSTQ03001 7570 aaKnown RBP5.75□□□□□ -1.49
NELFCD-201ENST00000460601 KRTAP19-4Q3LI73 84 aa5.66□□□□□ -1.5
NELFCD-201ENST00000460601 KRTAP9-6A8MVA2 160 aa5.63□□□□□ -1.51
NELFCD-201ENST00000460601 SPRR2DP22532 72 aa5.58□□□□□ -1.52
NELFCD-201ENST00000460601 NEBP20929 6669 aa5.57□□□□□ -1.52
NELFCD-201ENST00000460601 LOC100996750A0A140TA64 210 aa5.56□□□□□ -1.52
NELFCD-201ENST00000460601 LCE3BQ5TA77 95 aa5.38□□□□□ -1.55
NELFCD-201ENST00000460601 KRTAP5-5Q701N2 237 aaPredicted RBP5.23□□□□□ -1.57
NELFCD-201ENST00000460601 KRTAP2-3P0C7H8 128 aa5.18□□□□□ -1.58
NELFCD-201ENST00000460601 KRTAP2-4Q9BYR9 128 aa5.18□□□□□ -1.58
NELFCD-201ENST00000460601 KRTAP20-1Q3LI63 56 aa5.15□□□□□ -1.59
NELFCD-201ENST00000460601 KRTAP6-1Q3LI64 71 aa5.09□□□□□ -1.59
NELFCD-201ENST00000460601 KRTAP2-1Q9BYU5 128 aa5.09□□□□□ -1.59
NELFCD-201ENST00000460601 KRTAP2-2Q9BYT5 123 aa5.08□□□□□ -1.6
NELFCD-201ENST00000460601 MT1AP04731 61 aa5.05□□□□□ -1.6
NELFCD-201ENST00000460601 SYNE1Q8NF91 8797 aaKnown RBP5.01□□□□□ -1.61
NELFCD-201ENST00000460601 KRTAP5-4Q6L8H1 288 aa5□□□□□ -1.61
NELFCD-201ENST00000460601 MT4P47944 62 aa4.92□□□□□ -1.62
NELFCD-201ENST00000460601 KRTAP4-9Q9BYQ8 210 aa4.92□□□□□ -1.62
NELFCD-201ENST00000460601 KRTAP4-6Q9BYQ5 205 aa4.88□□□□□ -1.63
NELFCD-201ENST00000460601 LCE4AQ5TA78 99 aa4.87□□□□□ -1.63
NELFCD-201ENST00000460601 KRTAP12-4P60329 112 aa4.82□□□□□ -1.64
NELFCD-201ENST00000460601 LCE1DQ5T752 114 aa4.82□□□□□ -1.64
NELFCD-201ENST00000460601 KRTAP9-4Q9BYQ2 154 aa4.82□□□□□ -1.64
NELFCD-201ENST00000460601 HMCN1Q96RW7 5635 aa4.78□□□□□ -1.64
NELFCD-201ENST00000460601 KRTAP20-2Q3LI61 65 aa4.71□□□□□ -1.66
NELFCD-201ENST00000460601 KRTAP6-2Q3LI66 62 aa4.7□□□□□ -1.66
NELFCD-201ENST00000460601 OBSCNQ5VST9 7968 aa4.59□□□□□ -1.67
NELFCD-201ENST00000460601 MT3P25713 68 aa4.57□□□□□ -1.68
NELFCD-201ENST00000460601 KRTAP5-3Q6L8H2 238 aa4.54□□□□□ -1.68
NELFCD-201ENST00000460601 KRTAP5-2Q701N4 177 aa4.52□□□□□ -1.69
NELFCD-201ENST00000460601 LCE3DQ9BYE3 92 aa4.37□□□□□ -1.71
NELFCD-201ENST00000460601 LCE3EQ5T5B0 92 aa4.22□□□□□ -1.73
NELFCD-201ENST00000460601 AHNAK2Q8IVF2 5795 aa4.17□□□□□ -1.74
NELFCD-201ENST00000460601 GPR98Q8WXG9 6306 aa4.12□□□□□ -1.75
NELFCD-201ENST00000460601 KRTAP4-11Q9BYQ6 195 aa4.11□□□□□ -1.75
NELFCD-201ENST00000460601 KRTAP5-10Q6L8G5 202 aa4.03□□□□□ -1.76
NELFCD-201ENST00000460601 PRM1P04553 51 aa4.01□□□□□ -1.77
NELFCD-201ENST00000460601 KRTAP5-8O75690 187 aa3.96□□□□□ -1.78
NELFCD-201ENST00000460601 LCE1EQ5T753 118 aa3.96□□□□□ -1.78
NELFCD-201ENST00000460601 KRTAP5-1Q6L8H4 278 aa3.96□□□□□ -1.78
NELFCD-201ENST00000460601 LCE1BQ5T7P3 118 aa3.83□□□□□ -1.8
NELFCD-201ENST00000460601 KRTAP4-2Q9BYR5 136 aa3.78□□□□□ -1.8
NELFCD-201ENST00000460601 MUC5ACP98088 5654 aa3.75□□□□□ -1.81
NELFCD-201ENST00000460601 KRTAP5-7Q6L8G8 165 aa3.74□□□□□ -1.81
NELFCD-201ENST00000460601 LCE1CQ5T751 118 aa3.72□□□□□ -1.81
NELFCD-201ENST00000460601 KRTAP9-9Q9BYP9 154 aa3.55□□□□□ -1.84
NELFCD-201ENST00000460601 MUC5BQ9HC84 5762 aaPredicted RBP3.5□□□□□ -1.85
NELFCD-201ENST00000460601 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.44□□□□□ -1.86
NELFCD-201ENST00000460601 KRTAP21-2Q3LI59 83 aa3.32□□□□□ -1.88
NELFCD-201ENST00000460601 KRTAP5-11Q6L8G4 156 aa3.29□□□□□ -1.88
NELFCD-201ENST00000460601 KRTAP4-12Q9BQ66 201 aa3.25□□□□□ -1.89
NELFCD-201ENST00000460601 AHNAKQ09666 5890 aaKnown RBP3.17□□□□□ -1.9
NELFCD-201ENST00000460601 KRTAP4-4Q9BYR3 166 aa3.04□□□□□ -1.92
NELFCD-201ENST00000460601 LCE1FQ5T754 118 aa2.93□□□□□ -1.94
NELFCD-201ENST00000460601 PHGR1C9JFL3 82 aa2.85□□□□□ -1.95
NELFCD-201ENST00000460601 MUC19Q7Z5P9 8384 aa2.71□□□□□ -1.98
NELFCD-201ENST00000460601 KRTAP21-1Q3LI58 79 aa2.62□□□□□ -1.99
NELFCD-201ENST00000460601 MUC16Q8WXI7 14507 aa1.76□□□□□ -2.13
Retrieved 78 of 20,778 RNA–protein pairs in 113.5 ms