RNA–Protein interactions for RNA: ENST00000460475.1

PLOD3-209, Transcript of procollagen-lysine,2-oxoglutarate 5-dioxygenase 3, humanhuman

TSL 3

Gene PLOD3, Length 746 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLOD3-209ENST00000460475 MT1GP13640 62 aa6.4□□□□□ -1.38
PLOD3-209ENST00000460475 K7ERS5 55 aa6.39□□□□□ -1.39
PLOD3-209ENST00000460475 DSTQ03001 7570 aaKnown RBP6.36□□□□□ -1.39
PLOD3-209ENST00000460475 MT1LQ93083 61 aa6.35□□□□□ -1.39
PLOD3-209ENST00000460475 KRTAP25-1Q3LHN0 102 aa6.32□□□□□ -1.4
PLOD3-209ENST00000460475 A6NED7 52 aa6.31□□□□□ -1.4
PLOD3-209ENST00000460475 PP632Q6XCG6 107 aa6.31□□□□□ -1.4
PLOD3-209ENST00000460475 MT1MQ8N339 61 aa6.27□□□□□ -1.41
PLOD3-209ENST00000460475 KRTAP12-3P60328 96 aa6.24□□□□□ -1.41
PLOD3-209ENST00000460475 KRTAP23-1A1A580 65 aa6.13□□□□□ -1.43
PLOD3-209ENST00000460475 KRTAP4-3Q9BYR4 195 aa6.09□□□□□ -1.43
PLOD3-209ENST00000460475 CDC42SE1Q9NRR8 79 aa6.08□□□□□ -1.44
PLOD3-209ENST00000460475 KRTAP4-7Q9BYR0 210 aa6.02□□□□□ -1.45
PLOD3-209ENST00000460475 ROMO1P60602 79 aa6.01□□□□□ -1.45
PLOD3-209ENST00000460475 KRTAP19-4Q3LI73 84 aa5.98□□□□□ -1.45
PLOD3-209ENST00000460475 KRTAP4-9Q9BYQ8 210 aa5.97□□□□□ -1.45
PLOD3-209ENST00000460475 LCE4AQ5TA78 99 aa5.95□□□□□ -1.46
PLOD3-209ENST00000460475 KRTAP5-4Q6L8H1 288 aa5.91□□□□□ -1.46
PLOD3-209ENST00000460475 KRTAP15-1Q3LI76 137 aa5.9□□□□□ -1.46
PLOD3-209ENST00000460475 HMCN1Q96RW7 5635 aa5.9□□□□□ -1.47
PLOD3-209ENST00000460475 GPR98Q8WXG9 6306 aa5.88□□□□□ -1.47
PLOD3-209ENST00000460475 LCE1DQ5T752 114 aa5.88□□□□□ -1.47
PLOD3-209ENST00000460475 MT4P47944 62 aa5.8□□□□□ -1.48
PLOD3-209ENST00000460475 LCE3CQ5T5A8 94 aa5.78□□□□□ -1.48
PLOD3-209ENST00000460475 KRTAP5-5Q701N2 237 aaPredicted RBP5.77□□□□□ -1.49
PLOD3-209ENST00000460475 KRTAP4-6Q9BYQ5 205 aa5.7□□□□□ -1.5
PLOD3-209ENST00000460475 LOC100996750A0A140TA64 210 aa5.69□□□□□ -1.5
PLOD3-209ENST00000460475 AHNAK2Q8IVF2 5795 aa5.6□□□□□ -1.51
PLOD3-209ENST00000460475 BRK1Q8WUW1 75 aa5.59□□□□□ -1.51
PLOD3-209ENST00000460475 SPRR5A0A1B0GTR4 108 aa5.56□□□□□ -1.52
PLOD3-209ENST00000460475 SYNE1Q8NF91 8797 aaKnown RBP5.55□□□□□ -1.52
PLOD3-209ENST00000460475 KRTAP12-4P60329 112 aa5.53□□□□□ -1.52
PLOD3-209ENST00000460475 KRTAP20-2Q3LI61 65 aa5.53□□□□□ -1.52
PLOD3-209ENST00000460475 KRTAP9-6A8MVA2 160 aa5.46□□□□□ -1.54
PLOD3-209ENST00000460475 KRTAP5-10Q6L8G5 202 aa5.42□□□□□ -1.54
PLOD3-209ENST00000460475 MT1AP04731 61 aa5.41□□□□□ -1.54
PLOD3-209ENST00000460475 KRTAP5-3Q6L8H2 238 aa5.39□□□□□ -1.55
PLOD3-209ENST00000460475 KRTAP6-1Q3LI64 71 aa5.35□□□□□ -1.55
PLOD3-209ENST00000460475 PMAIP1Q13794 54 aa5.28□□□□□ -1.56
PLOD3-209ENST00000460475 KRTAP5-7Q6L8G8 165 aa5.21□□□□□ -1.58
PLOD3-209ENST00000460475 KRTAP5-2Q701N4 177 aa5.21□□□□□ -1.58
PLOD3-209ENST00000460475 KRTAP9-4Q9BYQ2 154 aa5.2□□□□□ -1.58
PLOD3-209ENST00000460475 KRTAP6-2Q3LI66 62 aa5.07□□□□□ -1.6
PLOD3-209ENST00000460475 PRO0628Q9UI54 55 aa5.04□□□□□ -1.6
PLOD3-209ENST00000460475 PRAC1Q96KF2 57 aa5.03□□□□□ -1.6
PLOD3-209ENST00000460475 KRTAP4-11Q9BYQ6 195 aa5.01□□□□□ -1.61
PLOD3-209ENST00000460475 MT3P25713 68 aa4.94□□□□□ -1.62
PLOD3-209ENST00000460475 SVIPQ8NHG7 77 aa4.87□□□□□ -1.63
PLOD3-209ENST00000460475 OBSCNQ5VST9 7968 aa4.85□□□□□ -1.63
PLOD3-209ENST00000460475 KRTAP5-8O75690 187 aa4.84□□□□□ -1.63
PLOD3-209ENST00000460475 KTN1-AS1Q86SY8 53 aa4.77□□□□□ -1.65
PLOD3-209ENST00000460475 MUC5ACP98088 5654 aa4.66□□□□□ -1.66
PLOD3-209ENST00000460475 MUC5BQ9HC84 5762 aaPredicted RBP4.64□□□□□ -1.67
PLOD3-209ENST00000460475 KRTAP5-1Q6L8H4 278 aa4.63□□□□□ -1.67
PLOD3-209ENST00000460475 AHNAKQ09666 5890 aaKnown RBP4.6□□□□□ -1.67
PLOD3-209ENST00000460475 KRTAP9-9Q9BYP9 154 aa4.53□□□□□ -1.68
PLOD3-209ENST00000460475 LCE1EQ5T753 118 aa4.52□□□□□ -1.69
PLOD3-209ENST00000460475 KRTAP4-2Q9BYR5 136 aa4.23□□□□□ -1.73
PLOD3-209ENST00000460475 LUZP6Q538Z0 58 aa4.22□□□□□ -1.73
PLOD3-209ENST00000460475 LCE1CQ5T751 118 aa4.19□□□□□ -1.74
PLOD3-209ENST00000460475 LCE1BQ5T7P3 118 aa4.19□□□□□ -1.74
PLOD3-209ENST00000460475 LCE3DQ9BYE3 92 aa4.19□□□□□ -1.74
PLOD3-209ENST00000460475 LCE3EQ5T5B0 92 aa3.98□□□□□ -1.77
PLOD3-209ENST00000460475 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.85□□□□□ -1.79
PLOD3-209ENST00000460475 KRTAP5-11Q6L8G4 156 aa3.77□□□□□ -1.81
PLOD3-209ENST00000460475 KRTAP4-12Q9BQ66 201 aa3.72□□□□□ -1.81
PLOD3-209ENST00000460475 LCE1FQ5T754 118 aa3.64□□□□□ -1.83
PLOD3-209ENST00000460475 KRTAP21-2Q3LI59 83 aa3.55□□□□□ -1.84
PLOD3-209ENST00000460475 NDUFAF8A1L188 74 aa3.52□□□□□ -1.85
PLOD3-209ENST00000460475 H3BS24 57 aa3.28□□□□□ -1.88
PLOD3-209ENST00000460475 PHGR1C9JFL3 82 aa3.25□□□□□ -1.89
PLOD3-209ENST00000460475 KRTAP4-4Q9BYR3 166 aa3.16□□□□□ -1.9
PLOD3-209ENST00000460475 A0A0A0MQY5 61 aa3.06□□□□□ -1.92
PLOD3-209ENST00000460475 PRM1P04553 51 aa3.06□□□□□ -1.92
PLOD3-209ENST00000460475 MUC19Q7Z5P9 8384 aa2.99□□□□□ -1.93
PLOD3-209ENST00000460475 INE1O15225 51 aa2.88□□□□□ -1.95
PLOD3-209ENST00000460475 KRTAP21-1Q3LI58 79 aa2.37□□□□□ -2.03
PLOD3-209ENST00000460475 MUC16Q8WXI7 14507 aa2.15□□□□□ -2.07
Retrieved 78 of 20,778 RNA–protein pairs in 338.7 ms