RNA–Protein interactions for RNA: ENST00000460160.5

HOXB3-202, Transcript of homeobox B3, humanhuman

TSL 5 BASIC

Gene HOXB3, Length 1,525 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3-202ENST00000460160 PP632Q6XCG6 107 aa8.44□□□□□ -1.06
HOXB3-202ENST00000460160 MT1LQ93083 61 aa8.44□□□□□ -1.06
HOXB3-202ENST00000460160 MT1MQ8N339 61 aa8.4□□□□□ -1.06
HOXB3-202ENST00000460160 MIR22HGQ0VDD5 57 aa8.35□□□□□ -1.07
HOXB3-202ENST00000460160 KRTAP4-9Q9BYQ8 210 aa8.32□□□□□ -1.08
HOXB3-202ENST00000460160 KRTAP4-3Q9BYR4 195 aa8.22□□□□□ -1.09
HOXB3-202ENST00000460160 A6NED7 52 aa8.19□□□□□ -1.1
HOXB3-202ENST00000460160 KRTAP12-3P60328 96 aa8.16□□□□□ -1.1
HOXB3-202ENST00000460160 LCE1DQ5T752 114 aa8.13□□□□□ -1.11
HOXB3-202ENST00000460160 LCE4AQ5TA78 99 aa8.12□□□□□ -1.11
HOXB3-202ENST00000460160 GPR98Q8WXG9 6306 aa8.1□□□□□ -1.11
HOXB3-202ENST00000460160 SVIPQ8NHG7 77 aa8.09□□□□□ -1.11
HOXB3-202ENST00000460160 HMCN1Q96RW7 5635 aa8.09□□□□□ -1.11
HOXB3-202ENST00000460160 KRTAP25-1Q3LHN0 102 aa8.04□□□□□ -1.12
HOXB3-202ENST00000460160 KRTAP4-7Q9BYR0 210 aa8.04□□□□□ -1.12
HOXB3-202ENST00000460160 MT4P47944 62 aa8.03□□□□□ -1.12
HOXB3-202ENST00000460160 K7ERS5 55 aa8.02□□□□□ -1.13
HOXB3-202ENST00000460160 KRTAP5-4Q6L8H1 288 aa8.01□□□□□ -1.13
HOXB3-202ENST00000460160 CDC42SE1Q9NRR8 79 aa7.94□□□□□ -1.14
HOXB3-202ENST00000460160 KRTAP4-6Q9BYQ5 205 aa7.83□□□□□ -1.16
HOXB3-202ENST00000460160 AHNAK2Q8IVF2 5795 aa7.77□□□□□ -1.16
HOXB3-202ENST00000460160 KRTAP23-1A1A580 65 aa7.74□□□□□ -1.17
HOXB3-202ENST00000460160 KRTAP5-5Q701N2 237 aaPredicted RBP7.72□□□□□ -1.17
HOXB3-202ENST00000460160 KRTAP19-4Q3LI73 84 aa7.67□□□□□ -1.18
HOXB3-202ENST00000460160 ROMO1P60602 79 aa7.64□□□□□ -1.19
HOXB3-202ENST00000460160 KRTAP15-1Q3LI76 137 aa7.62□□□□□ -1.19
HOXB3-202ENST00000460160 LOC100996750A0A140TA64 210 aa7.62□□□□□ -1.19
HOXB3-202ENST00000460160 BRK1Q8WUW1 75 aa7.57□□□□□ -1.2
HOXB3-202ENST00000460160 KRTAP20-2Q3LI61 65 aa7.55□□□□□ -1.2
HOXB3-202ENST00000460160 KRTAP5-10Q6L8G5 202 aa7.55□□□□□ -1.2
HOXB3-202ENST00000460160 LCE3CQ5T5A8 94 aa7.52□□□□□ -1.2
HOXB3-202ENST00000460160 SPRR5A0A1B0GTR4 108 aa7.5□□□□□ -1.21
HOXB3-202ENST00000460160 KRTAP12-4P60329 112 aa7.47□□□□□ -1.21
HOXB3-202ENST00000460160 SYNE1Q8NF91 8797 aaKnown RBP7.46□□□□□ -1.22
HOXB3-202ENST00000460160 KRTAP5-3Q6L8H2 238 aa7.37□□□□□ -1.23
HOXB3-202ENST00000460160 KRTAP5-7Q6L8G8 165 aa7.25□□□□□ -1.25
HOXB3-202ENST00000460160 PRO0628Q9UI54 55 aa7.21□□□□□ -1.26
HOXB3-202ENST00000460160 MT1AP04731 61 aa7.17□□□□□ -1.26
HOXB3-202ENST00000460160 PMAIP1Q13794 54 aa7.15□□□□□ -1.27
HOXB3-202ENST00000460160 KRTAP6-1Q3LI64 71 aa7.15□□□□□ -1.27
HOXB3-202ENST00000460160 KRTAP9-6A8MVA2 160 aa7.13□□□□□ -1.27
HOXB3-202ENST00000460160 KRTAP5-2Q701N4 177 aa7.02□□□□□ -1.29
HOXB3-202ENST00000460160 KRTAP9-4Q9BYQ2 154 aa6.92□□□□□ -1.3
HOXB3-202ENST00000460160 KRTAP4-11Q9BYQ6 195 aa6.88□□□□□ -1.31
HOXB3-202ENST00000460160 KRTAP6-2Q3LI66 62 aa6.81□□□□□ -1.32
HOXB3-202ENST00000460160 PRAC1Q96KF2 57 aa6.81□□□□□ -1.32
HOXB3-202ENST00000460160 KRTAP5-8O75690 187 aa6.66□□□□□ -1.34
HOXB3-202ENST00000460160 OBSCNQ5VST9 7968 aa6.61□□□□□ -1.35
HOXB3-202ENST00000460160 KTN1-AS1Q86SY8 53 aa6.59□□□□□ -1.35
HOXB3-202ENST00000460160 MT3P25713 68 aa6.55□□□□□ -1.36
HOXB3-202ENST00000460160 MUC5BQ9HC84 5762 aaPredicted RBP6.41□□□□□ -1.38
HOXB3-202ENST00000460160 AHNAKQ09666 5890 aaKnown RBP6.37□□□□□ -1.39
HOXB3-202ENST00000460160 MUC5ACP98088 5654 aa6.35□□□□□ -1.39
HOXB3-202ENST00000460160 KRTAP5-1Q6L8H4 278 aa6.3□□□□□ -1.4
HOXB3-202ENST00000460160 KRTAP9-9Q9BYP9 154 aa6.28□□□□□ -1.4
HOXB3-202ENST00000460160 LCE1EQ5T753 118 aa6.01□□□□□ -1.45
HOXB3-202ENST00000460160 KRTAP4-2Q9BYR5 136 aa5.7□□□□□ -1.5
HOXB3-202ENST00000460160 H3BS24 57 aa5.66□□□□□ -1.5
HOXB3-202ENST00000460160 LCE1BQ5T7P3 118 aa5.65□□□□□ -1.5
HOXB3-202ENST00000460160 LCE1CQ5T751 118 aa5.58□□□□□ -1.52
HOXB3-202ENST00000460160 LUZP6Q538Z0 58 aa5.56□□□□□ -1.52
HOXB3-202ENST00000460160 LCE3DQ9BYE3 92 aa5.42□□□□□ -1.54
HOXB3-202ENST00000460160 NDUFAF8A1L188 74 aa5.23□□□□□ -1.57
HOXB3-202ENST00000460160 KRTAP4-12Q9BQ66 201 aa5.15□□□□□ -1.58
HOXB3-202ENST00000460160 LCE3EQ5T5B0 92 aa5.09□□□□□ -1.59
HOXB3-202ENST00000460160 KRTAP5-6Q6L8G9 129 aaPredicted RBP5.09□□□□□ -1.59
HOXB3-202ENST00000460160 KRTAP5-11Q6L8G4 156 aa5.07□□□□□ -1.6
HOXB3-202ENST00000460160 LCE1FQ5T754 118 aa4.9□□□□□ -1.63
HOXB3-202ENST00000460160 A0A0A0MQY5 61 aa4.83□□□□□ -1.64
HOXB3-202ENST00000460160 KRTAP21-2Q3LI59 83 aa4.71□□□□□ -1.66
HOXB3-202ENST00000460160 INE1O15225 51 aa4.41□□□□□ -1.7
HOXB3-202ENST00000460160 PHGR1C9JFL3 82 aa4.38□□□□□ -1.71
HOXB3-202ENST00000460160 KRTAP4-4Q9BYR3 166 aa4.31□□□□□ -1.72
HOXB3-202ENST00000460160 MUC19Q7Z5P9 8384 aa4.08□□□□□ -1.76
HOXB3-202ENST00000460160 PRM1P04553 51 aa3.95□□□□□ -1.78
HOXB3-202ENST00000460160 KRTAP21-1Q3LI58 79 aa3.32□□□□□ -1.88
HOXB3-202ENST00000460160 MUC16Q8WXI7 14507 aa2.89□□□□□ -1.95
Retrieved 77 of 20,778 RNA–protein pairs in 97.2 ms