RNA–Protein interactions for RNA: ENST00000460097.5

CMTM3-203, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 2 BASIC

Gene CMTM3, Length 1,797 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-203ENST00000460097 KRTAP4-8Q9BYQ9 185 aa5.9□□□□□ -1.46
CMTM3-203ENST00000460097 SPRR2FQ96RM1 72 aa5.83□□□□□ -1.48
CMTM3-203ENST00000460097 MDN1Q9NU22 5596 aa5.82□□□□□ -1.48
CMTM3-203ENST00000460097 NEBP20929 6669 aa5.78□□□□□ -1.48
CMTM3-203ENST00000460097 LCE3CQ5T5A8 94 aa5.75□□□□□ -1.49
CMTM3-203ENST00000460097 KRTAP19-4Q3LI73 84 aa5.67□□□□□ -1.5
CMTM3-203ENST00000460097 SPRR2EP22531 72 aa5.67□□□□□ -1.5
CMTM3-203ENST00000460097 SPRR2BP35325 72 aa5.67□□□□□ -1.5
CMTM3-203ENST00000460097 SPRR2AP35326 72 aa5.67□□□□□ -1.5
CMTM3-203ENST00000460097 KRTAP19-5Q3LI72 72 aa5.64□□□□□ -1.51
CMTM3-203ENST00000460097 LCE1AQ5T7P2 110 aa5.63□□□□□ -1.51
CMTM3-203ENST00000460097 KRTAP19-7Q3SYF9 63 aa5.6□□□□□ -1.51
CMTM3-203ENST00000460097 KRTAP2-3P0C7H8 128 aa5.58□□□□□ -1.52
CMTM3-203ENST00000460097 KRTAP2-4Q9BYR9 128 aa5.58□□□□□ -1.52
CMTM3-203ENST00000460097 KRTAP2-1Q9BYU5 128 aa5.58□□□□□ -1.52
CMTM3-203ENST00000460097 MT1EP04732 61 aa5.54□□□□□ -1.52
CMTM3-203ENST00000460097 KRTAP9-6A8MVA2 160 aa5.47□□□□□ -1.53
CMTM3-203ENST00000460097 KRTAP20-1Q3LI63 56 aa5.47□□□□□ -1.53
CMTM3-203ENST00000460097 SPRR2DP22532 72 aa5.47□□□□□ -1.53
CMTM3-203ENST00000460097 KRTAP19-3Q7Z4W3 81 aa5.43□□□□□ -1.54
CMTM3-203ENST00000460097 LCE5AQ5TCM9 118 aa5.4□□□□□ -1.54
CMTM3-203ENST00000460097 MT1GP13640 62 aa5.35□□□□□ -1.55
CMTM3-203ENST00000460097 MT1LQ93083 61 aa5.34□□□□□ -1.55
CMTM3-203ENST00000460097 LCE3BQ5TA77 95 aa5.3□□□□□ -1.56
CMTM3-203ENST00000460097 DSTQ03001 7570 aaKnown RBP5.28□□□□□ -1.56
CMTM3-203ENST00000460097 KRTAP2-2Q9BYT5 123 aa5.28□□□□□ -1.56
CMTM3-203ENST00000460097 MT1MQ8N339 61 aa5.24□□□□□ -1.57
CMTM3-203ENST00000460097 KRTAP4-7Q9BYR0 210 aa5.16□□□□□ -1.58
CMTM3-203ENST00000460097 KRTAP4-3Q9BYR4 195 aa5.11□□□□□ -1.59
CMTM3-203ENST00000460097 KRTAP12-4P60329 112 aa4.88□□□□□ -1.63
CMTM3-203ENST00000460097 LCE4AQ5TA78 99 aa4.86□□□□□ -1.63
CMTM3-203ENST00000460097 KRTAP4-9Q9BYQ8 210 aa4.85□□□□□ -1.63
CMTM3-203ENST00000460097 LOC100996750A0A140TA64 210 aa4.82□□□□□ -1.64
CMTM3-203ENST00000460097 KRTAP5-4Q6L8H1 288 aa4.81□□□□□ -1.64
CMTM3-203ENST00000460097 KRTAP5-5Q701N2 237 aaPredicted RBP4.78□□□□□ -1.64
CMTM3-203ENST00000460097 MT4P47944 62 aa4.76□□□□□ -1.65
CMTM3-203ENST00000460097 LCE1DQ5T752 114 aa4.76□□□□□ -1.65
CMTM3-203ENST00000460097 HMCN1Q96RW7 5635 aa4.72□□□□□ -1.65
CMTM3-203ENST00000460097 MT1AP04731 61 aa4.72□□□□□ -1.65
CMTM3-203ENST00000460097 KRTAP4-6Q9BYQ5 205 aa4.66□□□□□ -1.66
CMTM3-203ENST00000460097 SYNE1Q8NF91 8797 aaKnown RBP4.62□□□□□ -1.67
CMTM3-203ENST00000460097 KRTAP20-2Q3LI61 65 aa4.53□□□□□ -1.69
CMTM3-203ENST00000460097 KRTAP6-1Q3LI64 71 aa4.5□□□□□ -1.69
CMTM3-203ENST00000460097 LCE3EQ5T5B0 92 aa4.47□□□□□ -1.69
CMTM3-203ENST00000460097 LCE3DQ9BYE3 92 aa4.47□□□□□ -1.69
CMTM3-203ENST00000460097 GPR98Q8WXG9 6306 aa4.44□□□□□ -1.7
CMTM3-203ENST00000460097 AHNAK2Q8IVF2 5795 aa4.43□□□□□ -1.7
CMTM3-203ENST00000460097 KRTAP5-3Q6L8H2 238 aa4.38□□□□□ -1.71
CMTM3-203ENST00000460097 KRTAP9-4Q9BYQ2 154 aa4.38□□□□□ -1.71
CMTM3-203ENST00000460097 PRM1P04553 51 aa4.33□□□□□ -1.72
CMTM3-203ENST00000460097 KRTAP5-2Q701N4 177 aa4.27□□□□□ -1.73
CMTM3-203ENST00000460097 KRTAP5-10Q6L8G5 202 aa4.26□□□□□ -1.73
CMTM3-203ENST00000460097 KRTAP6-2Q3LI66 62 aa4.25□□□□□ -1.73
CMTM3-203ENST00000460097 MT3P25713 68 aa4.17□□□□□ -1.74
CMTM3-203ENST00000460097 KRTAP4-11Q9BYQ6 195 aa4.07□□□□□ -1.76
CMTM3-203ENST00000460097 KRTAP5-7Q6L8G8 165 aa4.05□□□□□ -1.76
CMTM3-203ENST00000460097 OBSCNQ5VST9 7968 aa4.05□□□□□ -1.76
CMTM3-203ENST00000460097 KRTAP5-8O75690 187 aa3.91□□□□□ -1.78
CMTM3-203ENST00000460097 KRTAP5-1Q6L8H4 278 aa3.78□□□□□ -1.8
CMTM3-203ENST00000460097 LCE1EQ5T753 118 aa3.74□□□□□ -1.81
CMTM3-203ENST00000460097 MUC5ACP98088 5654 aa3.72□□□□□ -1.81
CMTM3-203ENST00000460097 KRTAP9-9Q9BYP9 154 aa3.67□□□□□ -1.82
CMTM3-203ENST00000460097 MUC5BQ9HC84 5762 aaPredicted RBP3.62□□□□□ -1.83
CMTM3-203ENST00000460097 LCE1FQ5T754 118 aa3.59□□□□□ -1.83
CMTM3-203ENST00000460097 AHNAKQ09666 5890 aaKnown RBP3.56□□□□□ -1.84
CMTM3-203ENST00000460097 LCE1BQ5T7P3 118 aa3.51□□□□□ -1.85
CMTM3-203ENST00000460097 KRTAP4-2Q9BYR5 136 aa3.49□□□□□ -1.85
CMTM3-203ENST00000460097 LCE1CQ5T751 118 aa3.48□□□□□ -1.85
CMTM3-203ENST00000460097 KRTAP4-12Q9BQ66 201 aa3.39□□□□□ -1.87
CMTM3-203ENST00000460097 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.19□□□□□ -1.9
CMTM3-203ENST00000460097 KRTAP5-11Q6L8G4 156 aa3.1□□□□□ -1.91
CMTM3-203ENST00000460097 KRTAP21-2Q3LI59 83 aa2.96□□□□□ -1.94
CMTM3-203ENST00000460097 KRTAP21-1Q3LI58 79 aa2.89□□□□□ -1.95
CMTM3-203ENST00000460097 PHGR1C9JFL3 82 aa2.68□□□□□ -1.98
CMTM3-203ENST00000460097 KRTAP4-4Q9BYR3 166 aa2.67□□□□□ -1.98
CMTM3-203ENST00000460097 MUC19Q7Z5P9 8384 aa2.44□□□□□ -2.02
CMTM3-203ENST00000460097 MUC16Q8WXI7 14507 aa1.74□□□□□ -2.13
Retrieved 77 of 20,778 RNA–protein pairs in 198 ms